RNA–Protein interactions for RNA: ENST00000516520.1

SCARNA16.2-201, small Cajal body-specific RNA 16, humanhuman

BASIC

Gene SCARNA16, Length 172 nt, Biotype scaRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA16.2-201ENST00000516520 SNUPNO95149 360 aaKnown RBP3.32□□□□□ -1.88
SCARNA16.2-201ENST00000516520 FTLP02792 175 aaPredicted RBP3.32□□□□□ -1.88
SCARNA16.2-201ENST00000516520 ATXN1LP0C7T5 689 aaKnown RBP3.32□□□□□ -1.88
SCARNA16.2-201ENST00000516520 PIM1P11309 404 aaPredicted RBP3.32□□□□□ -1.88
SCARNA16.2-201ENST00000516520 PPIFP30405 207 aaKnown RBP3.32□□□□□ -1.88
SCARNA16.2-201ENST00000516520 PHKA1P46020 1223 aa3.32□□□□□ -1.88
SCARNA16.2-201ENST00000516520 TOB1P50616 345 aaPredicted RBP3.32□□□□□ -1.88
SCARNA16.2-201ENST00000516520 EEFSECP57772 596 aaKnown RBP3.32□□□□□ -1.88
SCARNA16.2-201ENST00000516520 LOXL3P58215 753 aa3.32□□□□□ -1.88
SCARNA16.2-201ENST00000516520 GTF2H3Q13889 308 aa3.32□□□□□ -1.88
SCARNA16.2-201ENST00000516520 VPS53Q5VIR6 699 aa3.32□□□□□ -1.88
SCARNA16.2-201ENST00000516520 SLC9A4Q6AI14 798 aa3.32□□□□□ -1.88
SCARNA16.2-201ENST00000516520 TMEM108Q6UXF1 575 aa3.32□□□□□ -1.88
SCARNA16.2-201ENST00000516520 BHLHA9Q7RTU4 235 aa3.32□□□□□ -1.88
SCARNA16.2-201ENST00000516520 ZNF366Q8N895 744 aa3.32□□□□□ -1.88
SCARNA16.2-201ENST00000516520 C9orf106Q8NAJ2 232 aa3.32□□□□□ -1.88
SCARNA16.2-201ENST00000516520 PRPF38AQ8NAV1 312 aaKnown RBP3.32□□□□□ -1.88
SCARNA16.2-201ENST00000516520 FAM46DQ8NEK8 389 aa3.32□□□□□ -1.88
SCARNA16.2-201ENST00000516520 BRIX1Q8TDN6 353 aaKnown RBP3.32□□□□□ -1.88
SCARNA16.2-201ENST00000516520 MOGAT1Q96PD6 335 aa3.32□□□□□ -1.88
SCARNA16.2-201ENST00000516520 MRPS18AQ9NVS2 196 aaKnown RBP3.32□□□□□ -1.88
SCARNA16.2-201ENST00000516520 HESX1Q9UBX0 185 aa3.32□□□□□ -1.88
SCARNA16.2-201ENST00000516520 TNKSO95271 1327 aa3.31□□□□□ -1.88
SCARNA16.2-201ENST00000516520 H0YIZ8 118 aa3.31□□□□□ -1.88
SCARNA16.2-201ENST00000516520 MYO1FO00160 1098 aa3.31□□□□□ -1.88
SCARNA16.2-201ENST00000516520 PPP6CO00743 305 aa3.31□□□□□ -1.88
SCARNA16.2-201ENST00000516520 ZRANB2O95218 330 aaKnown RBP eCLIP3.31□□□□□ -1.88
SCARNA16.2-201ENST00000516520 BMP15O95972 392 aa3.31□□□□□ -1.88
SCARNA16.2-201ENST00000516520 TYRP14679 529 aa3.31□□□□□ -1.88
SCARNA16.2-201ENST00000516520 JUPP14923 745 aa3.31□□□□□ -1.88
SCARNA16.2-201ENST00000516520 PDCP20941 246 aa3.31□□□□□ -1.88
SCARNA16.2-201ENST00000516520 SATB1Q01826 763 aa3.31□□□□□ -1.88
SCARNA16.2-201ENST00000516520 FAM50AQ14320 339 aaKnown RBP3.31□□□□□ -1.88
SCARNA16.2-201ENST00000516520 ODF1Q14990 250 aa3.31□□□□□ -1.88
SCARNA16.2-201ENST00000516520 LONRF3Q496Y0 759 aa3.31□□□□□ -1.88
SCARNA16.2-201ENST00000516520 TMEM240Q5SV17 173 aa3.31□□□□□ -1.88
SCARNA16.2-201ENST00000516520 PRAMEF17Q5VTA0 474 aa3.31□□□□□ -1.88
SCARNA16.2-201ENST00000516520 C11orf87Q6NUJ2 197 aa3.31□□□□□ -1.88
SCARNA16.2-201ENST00000516520 USP45Q70EL2 814 aa3.31□□□□□ -1.88
SCARNA16.2-201ENST00000516520 PRR18Q8N4B5 295 aa3.31□□□□□ -1.88
SCARNA16.2-201ENST00000516520 DENND1AQ8TEH3 1009 aa3.31□□□□□ -1.88
SCARNA16.2-201ENST00000516520 REPS1Q96D71 796 aa3.31□□□□□ -1.88
SCARNA16.2-201ENST00000516520 SLC46A1Q96NT5 459 aa3.31□□□□□ -1.88
SCARNA16.2-201ENST00000516520 FCRL4Q96PJ5 515 aa3.31□□□□□ -1.88
SCARNA16.2-201ENST00000516520 SERHLQ9NQF3 203 aa3.31□□□□□ -1.88
SCARNA16.2-201ENST00000516520 DLL3Q9NYJ7 618 aa3.31□□□□□ -1.88
SCARNA16.2-201ENST00000516520 BTBD3Q9Y2F9 522 aa3.31□□□□□ -1.88
SCARNA16.2-201ENST00000516520 TBC1D30Q9Y2I9 924 aa3.31□□□□□ -1.88
SCARNA16.2-201ENST00000516520 ZNF213O14771 459 aa3.3□□□□□ -1.88
SCARNA16.2-201ENST00000516520 IKBKBO14920 756 aa3.3□□□□□ -1.88
SCARNA16.2-201ENST00000516520 TUBB4AP04350 444 aa3.3□□□□□ -1.88
SCARNA16.2-201ENST00000516520 IL6RP08887 468 aaPredicted RBP3.3□□□□□ -1.88
SCARNA16.2-201ENST00000516520 NPSP0C0P6 89 aa3.3□□□□□ -1.88
SCARNA16.2-201ENST00000516520 VCAM1P19320 739 aa3.3□□□□□ -1.88
SCARNA16.2-201ENST00000516520 CYP2C18P33260 490 aa3.3□□□□□ -1.88
SCARNA16.2-201ENST00000516520 PXNP49023 591 aaPredicted RBP3.3□□□□□ -1.88
SCARNA16.2-201ENST00000516520 AMPD3Q01432 767 aa3.3□□□□□ -1.88
SCARNA16.2-201ENST00000516520 KLF9Q13886 244 aaPredicted RBP3.3□□□□□ -1.88
SCARNA16.2-201ENST00000516520 AMOTQ4VCS5 1084 aa3.3□□□□□ -1.88
SCARNA16.2-201ENST00000516520 CCDC157Q569K6 752 aa3.3□□□□□ -1.88
SCARNA16.2-201ENST00000516520 EMC10Q5UCC4 262 aa3.3□□□□□ -1.88
SCARNA16.2-201ENST00000516520 ZNF66Q6ZN08 573 aa3.3□□□□□ -1.88
SCARNA16.2-201ENST00000516520 YTHDF3Q7Z739 585 aaKnown RBP3.3□□□□□ -1.88
SCARNA16.2-201ENST00000516520 LRRC71Q8N4P6 559 aa3.3□□□□□ -1.88
SCARNA16.2-201ENST00000516520 RP9Q8TA86 221 aaKnown RBP3.3□□□□□ -1.88
SCARNA16.2-201ENST00000516520 MTFMTQ96DP5 389 aaKnown RBP3.3□□□□□ -1.88
SCARNA16.2-201ENST00000516520 SMAD5Q99717 465 aaKnown RBP3.3□□□□□ -1.88
SCARNA16.2-201ENST00000516520 PTDSS2Q9BVG9 487 aa3.3□□□□□ -1.88
SCARNA16.2-201ENST00000516520 BHMT2Q9H2M3 363 aa3.3□□□□□ -1.88
SCARNA16.2-201ENST00000516520 PNPOQ9NVS9 261 aa3.3□□□□□ -1.88
SCARNA16.2-201ENST00000516520 SERTAD3Q9UJW9 196 aa3.3□□□□□ -1.88
SCARNA16.2-201ENST00000516520 PLEKHM1Q9Y4G2 1056 aa3.3□□□□□ -1.88
SCARNA16.2-201ENST00000516520 TISP43B9A030 160 aa3.29□□□□□ -1.88
SCARNA16.2-201ENST00000516520 PRRT4C9JH25 899 aa3.29□□□□□ -1.88
SCARNA16.2-201ENST00000516520 SMIM22K7EJ46 135 aa3.29□□□□□ -1.88
SCARNA16.2-201ENST00000516520 TP73O15350 636 aa3.29□□□□□ -1.88
SCARNA16.2-201ENST00000516520 MOSPD3O75425 235 aa3.29□□□□□ -1.88
SCARNA16.2-201ENST00000516520 AHSGP02765 367 aa3.29□□□□□ -1.88
SCARNA16.2-201ENST00000516520 IGKV2-30P06310 120 aa3.29□□□□□ -1.88
SCARNA16.2-201ENST00000516520 PDHA1P08559 390 aa3.29□□□□□ -1.88
SCARNA16.2-201ENST00000516520 POU2F2P09086 479 aa3.29□□□□□ -1.88
SCARNA16.2-201ENST00000516520 CYP2D6P10635 497 aa3.29□□□□□ -1.88
SCARNA16.2-201ENST00000516520 MPGP29372 298 aa3.29□□□□□ -1.88
SCARNA16.2-201ENST00000516520 LIPAP38571 399 aa3.29□□□□□ -1.88
SCARNA16.2-201ENST00000516520 VIPR2P41587 438 aa3.29□□□□□ -1.88
SCARNA16.2-201ENST00000516520 CLCN2P51788 898 aa3.29□□□□□ -1.88
SCARNA16.2-201ENST00000516520 MAP2K6P52564 334 aa3.29□□□□□ -1.88
SCARNA16.2-201ENST00000516520 ZNF134P52741 427 aa3.29□□□□□ -1.88
SCARNA16.2-201ENST00000516520 TPTEP56180 551 aa3.29□□□□□ -1.88
SCARNA16.2-201ENST00000516520 BOP1Q14137 746 aaKnown RBP3.29□□□□□ -1.88
SCARNA16.2-201ENST00000516520 E2F2Q14209 437 aa3.29□□□□□ -1.88
SCARNA16.2-201ENST00000516520 IQCB1Q15051 598 aa3.29□□□□□ -1.88
SCARNA16.2-201ENST00000516520 ETFDHQ16134 617 aa3.29□□□□□ -1.88
SCARNA16.2-201ENST00000516520 PGS1Q32NB8 556 aa3.29□□□□□ -1.88
SCARNA16.2-201ENST00000516520 PCID2Q5JVF3 399 aa3.29□□□□□ -1.88
SCARNA16.2-201ENST00000516520 TREML2Q5T2D2 321 aa3.29□□□□□ -1.88
SCARNA16.2-201ENST00000516520 SLC18B1Q6NT16 456 aa3.29□□□□□ -1.88
SCARNA16.2-201ENST00000516520 PARS2Q7L3T8 475 aaKnown RBP3.29□□□□□ -1.88
SCARNA16.2-201ENST00000516520 MAVSQ7Z434 540 aa3.29□□□□□ -1.88
SCARNA16.2-201ENST00000516520 PPP1R3BQ86XI6 285 aa3.29□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms