RNA–Protein interactions for RNA: ENST00000516428.1

RNU4-54P-201, Transcript of RNA, U4 small nuclear 54, pseudogene, humanhuman

BASIC

Gene RNU4-54P, Length 129 nt, Biotype snRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-54P-201ENST00000516428 SDCCAG3Q96C92 435 aa0.66□□□□□ -2.3
RNU4-54P-201ENST00000516428 TBC1D31Q96DN5 1066 aa0.66□□□□□ -2.3
RNU4-54P-201ENST00000516428 MBD6Q96DN6 1003 aa0.66□□□□□ -2.3
RNU4-54P-201ENST00000516428 MVB12AQ96EY5 273 aa0.66□□□□□ -2.3
RNU4-54P-201ENST00000516428 MYEOVQ96EZ4 313 aa0.66□□□□□ -2.3
RNU4-54P-201ENST00000516428 CYFIP2Q96F07 1278 aa0.66□□□□□ -2.3
RNU4-54P-201ENST00000516428 NUDT11Q96G61 164 aa0.66□□□□□ -2.3
RNU4-54P-201ENST00000516428 ZNF764Q96H86 408 aaPredicted RBP0.66□□□□□ -2.3
RNU4-54P-201ENST00000516428 C1orf159Q96HA4 380 aa0.66□□□□□ -2.3
RNU4-54P-201ENST00000516428 TMEM176AQ96HP8 235 aa0.66□□□□□ -2.3
RNU4-54P-201ENST00000516428 RAX2Q96IS3 184 aa0.66□□□□□ -2.3
RNU4-54P-201ENST00000516428 THOC3Q96J01 351 aaKnown RBP0.66□□□□□ -2.3
RNU4-54P-201ENST00000516428 UBXN10Q96LJ8 280 aa0.66□□□□□ -2.3
RNU4-54P-201ENST00000516428 TEKT5Q96M29 485 aa0.66□□□□□ -2.3
RNU4-54P-201ENST00000516428 ZNF512Q96ME7 567 aaPredicted RBP0.66□□□□□ -2.3
RNU4-54P-201ENST00000516428 RIPOR3Q96MK2 946 aa0.66□□□□□ -2.3
RNU4-54P-201ENST00000516428 TIGD1Q96MW7 591 aa0.66□□□□□ -2.3
RNU4-54P-201ENST00000516428 ZMAT2Q96NC0 199 aaKnown RBP0.66□□□□□ -2.3
RNU4-54P-201ENST00000516428 ACAP3Q96P50 834 aa0.66□□□□□ -2.3
RNU4-54P-201ENST00000516428 GNRHR2Q96P88 292 aa0.66□□□□□ -2.3
RNU4-54P-201ENST00000516428 MOGAT1Q96PD6 335 aa0.66□□□□□ -2.3
RNU4-54P-201ENST00000516428 FCRL4Q96PJ5 515 aa0.66□□□□□ -2.3
RNU4-54P-201ENST00000516428 PPP1R9BQ96SB3 815 aa0.66□□□□□ -2.3
RNU4-54P-201ENST00000516428 UHRF1Q96T88 793 aaPredicted RBP0.66□□□□□ -2.3
RNU4-54P-201ENST00000516428 RMDN3Q96TC7 470 aa0.66□□□□□ -2.3
RNU4-54P-201ENST00000516428 MYCBPQ99417 103 aaPredicted RBP0.66□□□□□ -2.3
RNU4-54P-201ENST00000516428 NELL2Q99435 816 aa0.66□□□□□ -2.3
RNU4-54P-201ENST00000516428 CGRRF1Q99675 332 aa0.66□□□□□ -2.3
RNU4-54P-201ENST00000516428 BAG1Q99933 345 aaPredicted RBP0.66□□□□□ -2.3
RNU4-54P-201ENST00000516428 PTPN18Q99952 460 aa0.66□□□□□ -2.3
RNU4-54P-201ENST00000516428 DPYSL5Q9BPU6 564 aa0.66□□□□□ -2.3
RNU4-54P-201ENST00000516428 NCAPGQ9BPX3 1015 aa0.66□□□□□ -2.3
RNU4-54P-201ENST00000516428 EIF2AK1Q9BQI3 630 aaKnown RBP0.66□□□□□ -2.3
RNU4-54P-201ENST00000516428 NOL10Q9BSC4 688 aaKnown RBP0.66□□□□□ -2.3
RNU4-54P-201ENST00000516428 ALG8Q9BVK2 526 aa0.66□□□□□ -2.3
RNU4-54P-201ENST00000516428 COLEC11Q9BWP8 271 aa0.66□□□□□ -2.3
RNU4-54P-201ENST00000516428 TTLL2Q9BWV7 592 aa0.66□□□□□ -2.3
RNU4-54P-201ENST00000516428 JAM3Q9BX67 310 aa0.66□□□□□ -2.3
RNU4-54P-201ENST00000516428 TMEM120AQ9BXJ8 343 aa0.66□□□□□ -2.3
RNU4-54P-201ENST00000516428 STK31Q9BXU1 1019 aa0.66□□□□□ -2.3
RNU4-54P-201ENST00000516428 EIF2AQ9BY44 585 aaKnown RBP0.66□□□□□ -2.3
RNU4-54P-201ENST00000516428 MRPL9Q9BYD2 267 aaKnown RBP0.66□□□□□ -2.3
RNU4-54P-201ENST00000516428 SEZ6LQ9BYH1 1024 aa0.66□□□□□ -2.3
RNU4-54P-201ENST00000516428 GTPBP4Q9BZE4 634 aaKnown RBP0.66□□□□□ -2.3
RNU4-54P-201ENST00000516428 UNKQ9C0B0 810 aaKnown RBP0.66□□□□□ -2.3
RNU4-54P-201ENST00000516428 SCAND2PQ9GZW5 306 aaPredicted RBP0.66□□□□□ -2.3
RNU4-54P-201ENST00000516428 MEGF9Q9H1U4 602 aa0.66□□□□□ -2.3
RNU4-54P-201ENST00000516428 CCDC68Q9H2F9 335 aa0.66□□□□□ -2.3
RNU4-54P-201ENST00000516428 BHMT2Q9H2M3 363 aa0.66□□□□□ -2.3
RNU4-54P-201ENST00000516428 TSPY26PQ9H489 355 aa0.66□□□□□ -2.3
RNU4-54P-201ENST00000516428 ELAC1Q9H777 363 aaKnown RBP0.66□□□□□ -2.3
RNU4-54P-201ENST00000516428 PRKRIP1Q9H875 184 aaPredicted RBP0.66□□□□□ -2.3
RNU4-54P-201ENST00000516428 ZWILCHQ9H900 591 aa0.66□□□□□ -2.3
RNU4-54P-201ENST00000516428 CERS4Q9HA82 394 aa0.66□□□□□ -2.3
RNU4-54P-201ENST00000516428 SPON1Q9HCB6 807 aa0.66□□□□□ -2.3
RNU4-54P-201ENST00000516428 VTA1Q9NP79 307 aa0.66□□□□□ -2.3
RNU4-54P-201ENST00000516428 UBN1Q9NPG3 1134 aa0.66□□□□□ -2.3
RNU4-54P-201ENST00000516428 SMYD2Q9NRG4 433 aa0.66□□□□□ -2.3
RNU4-54P-201ENST00000516428 DIAPH3Q9NSV4 1193 aa0.66□□□□□ -2.3
RNU4-54P-201ENST00000516428 OLA1Q9NTK5 396 aaKnown RBP0.66□□□□□ -2.3
RNU4-54P-201ENST00000516428 ANKEF1Q9NU02 776 aa0.66□□□□□ -2.3
RNU4-54P-201ENST00000516428 ABCF3Q9NUQ8 709 aa0.66□□□□□ -2.3
RNU4-54P-201ENST00000516428 OXSMQ9NWU1 459 aa0.66□□□□□ -2.3
RNU4-54P-201ENST00000516428 THG1LQ9NWX6 298 aaKnown RBP0.66□□□□□ -2.3
RNU4-54P-201ENST00000516428 IRAK4Q9NWZ3 460 aa0.66□□□□□ -2.3
RNU4-54P-201ENST00000516428 GPRC5BQ9NZH0 403 aa0.66□□□□□ -2.3
RNU4-54P-201ENST00000516428 TRPM5Q9NZQ8 1165 aa0.66□□□□□ -2.3
RNU4-54P-201ENST00000516428 RBPJLQ9UBG7 517 aa0.66□□□□□ -2.3
RNU4-54P-201ENST00000516428 SEL1LQ9UBV2 794 aa0.66□□□□□ -2.3
RNU4-54P-201ENST00000516428 APEX2Q9UBZ4 518 aa0.66□□□□□ -2.3
RNU4-54P-201ENST00000516428 CFDP1Q9UEE9 299 aaPredicted RBP0.66□□□□□ -2.3
RNU4-54P-201ENST00000516428 MAGED2Q9UNF1 606 aaPredicted RBP0.66□□□□□ -2.3
RNU4-54P-201ENST00000516428 MINPP1Q9UNW1 487 aa0.66□□□□□ -2.3
RNU4-54P-201ENST00000516428 GPR34Q9UPC5 381 aa0.66□□□□□ -2.3
RNU4-54P-201ENST00000516428 SRPK3Q9UPE1 567 aa0.66□□□□□ -2.3
RNU4-54P-201ENST00000516428 SORCS3Q9UPU3 1222 aa0.66□□□□□ -2.3
RNU4-54P-201ENST00000516428 CRYL1Q9Y2S2 319 aa0.66□□□□□ -2.3
RNU4-54P-201ENST00000516428 MTO1Q9Y2Z2 717 aaKnown RBP0.66□□□□□ -2.3
RNU4-54P-201ENST00000516428 TMX2Q9Y320 296 aa0.66□□□□□ -2.3
RNU4-54P-201ENST00000516428 RRP7AQ9Y3A4 280 aaKnown RBP0.66□□□□□ -2.3
RNU4-54P-201ENST00000516428 SIT1Q9Y3P8 196 aa0.66□□□□□ -2.3
RNU4-54P-201ENST00000516428 NOC2LQ9Y3T9 749 aaKnown RBP0.66□□□□□ -2.3
RNU4-54P-201ENST00000516428 KNSTRNQ9Y448 316 aa0.66□□□□□ -2.3
RNU4-54P-201ENST00000516428 TRAF6Q9Y4K3 522 aa0.66□□□□□ -2.3
RNU4-54P-201ENST00000516428 CEP83Q9Y592 693 aa0.66□□□□□ -2.3
RNU4-54P-201ENST00000516428 PCDHA8Q9Y5H6 950 aa0.66□□□□□ -2.3
RNU4-54P-201ENST00000516428 SPO11Q9Y5K1 396 aa0.66□□□□□ -2.3
RNU4-54P-201ENST00000516428 RBM8AQ9Y5S9 174 aaKnown RBP0.66□□□□□ -2.3
RNU4-54P-201ENST00000516428 SNX5Q9Y5X3 404 aa0.66□□□□□ -2.3
RNU4-54P-201ENST00000516428 GPR45Q9Y5Y3 372 aa0.66□□□□□ -2.3
RNU4-54P-201ENST00000516428 WNT6Q9Y6F9 365 aa0.66□□□□□ -2.3
RNU4-54P-201ENST00000516428 GPRASP1Q5JY77 1395 aa0.66□□□□□ -2.3
RNU4-54P-201ENST00000516428 TDRD9Q8NDG6 1382 aaKnown RBP0.66□□□□□ -2.3
RNU4-54P-201ENST00000516428 PASKQ96RG2 1323 aa0.65□□□□□ -2.3
RNU4-54P-201ENST00000516428 SYNRGQ9UMZ2 1314 aa0.65□□□□□ -2.3
RNU4-54P-201ENST00000516428 ASXL2Q76L83 1435 aa0.65□□□□□ -2.3
RNU4-54P-201ENST00000516428 RSF1Q96T23 1441 aaPredicted RBP0.65□□□□□ -2.3
RNU4-54P-201ENST00000516428 RUSC2Q8N2Y8 1516 aa0.65□□□□□ -2.31
RNU4-54P-201ENST00000516428 TRGV11A0A075B6L2 103 aa0.65□□□□□ -2.31
RNU4-54P-201ENST00000516428 UBE2QL1A1L167 161 aa0.65□□□□□ -2.31
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms