RNA–Protein interactions for RNA: ENST00000516009.1

SCARNA20.1-201, small Cajal body-specific RNA 20, humanhuman

BASIC

Gene SCARNA20, Length 138 nt, Biotype scaRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA20.1-201ENST00000516009 CLLU1OSQ5K130 101 aa8.09□□□□□ -1.11
SCARNA20.1-201ENST00000516009 CCDC181Q5TID7 509 aa8.09□□□□□ -1.11
SCARNA20.1-201ENST00000516009 WSCD1Q658N2 575 aa8.09□□□□□ -1.11
SCARNA20.1-201ENST00000516009 ARHGAP17Q68EM7 881 aa8.09□□□□□ -1.11
SCARNA20.1-201ENST00000516009 PLEKHA7Q6IQ23 1121 aa8.09□□□□□ -1.11
SCARNA20.1-201ENST00000516009 DNAJC24Q6P3W2 148 aa8.09□□□□□ -1.11
SCARNA20.1-201ENST00000516009 DCLRE1AQ6PJP8 1040 aa8.09□□□□□ -1.11
SCARNA20.1-201ENST00000516009 PHLDB2Q86SQ0 1253 aa8.09□□□□□ -1.11
SCARNA20.1-201ENST00000516009 CTAGE6Q86UF2 777 aa8.09□□□□□ -1.11
SCARNA20.1-201ENST00000516009 NT5DC3Q86UY8 548 aa8.09□□□□□ -1.11
SCARNA20.1-201ENST00000516009 OSTM1Q86WC4 334 aa8.09□□□□□ -1.11
SCARNA20.1-201ENST00000516009 CTAGE4Q8IX94 777 aa8.09□□□□□ -1.11
SCARNA20.1-201ENST00000516009 ABI1Q8IZP0 508 aa8.09□□□□□ -1.11
SCARNA20.1-201ENST00000516009 CRYBG2Q8N1P7 616 aa8.09□□□□□ -1.11
SCARNA20.1-201ENST00000516009 C12orf29Q8N999 325 aa8.09□□□□□ -1.11
SCARNA20.1-201ENST00000516009 C3orf58Q8NDZ4 430 aa8.09□□□□□ -1.11
SCARNA20.1-201ENST00000516009 UBA3Q8TBC4 463 aa8.09□□□□□ -1.11
SCARNA20.1-201ENST00000516009 IPO4Q8TEX9 1081 aaKnown RBP8.09□□□□□ -1.11
SCARNA20.1-201ENST00000516009 RABGGTAQ92696 567 aa8.09□□□□□ -1.11
SCARNA20.1-201ENST00000516009 SCLYQ96I15 445 aa8.09□□□□□ -1.11
SCARNA20.1-201ENST00000516009 PAWRQ96IZ0 340 aaKnown RBP8.09□□□□□ -1.11
SCARNA20.1-201ENST00000516009 FAM193BQ96PV7 902 aaPredicted RBP8.09□□□□□ -1.11
SCARNA20.1-201ENST00000516009 PSMB7Q99436 277 aa8.09□□□□□ -1.11
SCARNA20.1-201ENST00000516009 PAAF1Q9BRP4 392 aa8.09□□□□□ -1.11
SCARNA20.1-201ENST00000516009 TMEM106CQ9BVX2 250 aa8.09□□□□□ -1.11
SCARNA20.1-201ENST00000516009 WNT8AQ9H1J5 351 aa8.09□□□□□ -1.11
SCARNA20.1-201ENST00000516009 DPEP3Q9H4B8 488 aa8.09□□□□□ -1.11
SCARNA20.1-201ENST00000516009 SYNCQ9H7C4 482 aa8.09□□□□□ -1.11
SCARNA20.1-201ENST00000516009 ABCB6Q9NP58 842 aa8.09□□□□□ -1.11
SCARNA20.1-201ENST00000516009 TMEM39AQ9NV64 488 aa8.09□□□□□ -1.11
SCARNA20.1-201ENST00000516009 WDR35Q9P2L0 1181 aa8.09□□□□□ -1.11
SCARNA20.1-201ENST00000516009 HESX1Q9UBX0 185 aa8.09□□□□□ -1.11
SCARNA20.1-201ENST00000516009 TBX21Q9UL17 535 aa8.09□□□□□ -1.11
SCARNA20.1-201ENST00000516009 LRFN2Q9ULH4 789 aa8.09□□□□□ -1.11
SCARNA20.1-201ENST00000516009 PACSIN2Q9UNF0 486 aaPredicted RBP8.09□□□□□ -1.11
SCARNA20.1-201ENST00000516009 STXBP5LQ9Y2K9 1186 aa8.09□□□□□ -1.11
SCARNA20.1-201ENST00000516009 ALG6Q9Y672 507 aa8.09□□□□□ -1.11
SCARNA20.1-201ENST00000516009 MIF4GDA9UHW6 222 aaKnown RBP8.08□□□□□ -1.12
SCARNA20.1-201ENST00000516009 MYO1FO00160 1098 aa8.08□□□□□ -1.12
SCARNA20.1-201ENST00000516009 CES2O00748 559 aa8.08□□□□□ -1.12
SCARNA20.1-201ENST00000516009 KCNK3O14649 394 aa8.08□□□□□ -1.12
SCARNA20.1-201ENST00000516009 GABRDO14764 452 aa8.08□□□□□ -1.12
SCARNA20.1-201ENST00000516009 ZNF185O15231 689 aa8.08□□□□□ -1.12
SCARNA20.1-201ENST00000516009 HOXA2O43364 376 aa8.08□□□□□ -1.12
SCARNA20.1-201ENST00000516009 HCRTO43612 131 aa8.08□□□□□ -1.12
SCARNA20.1-201ENST00000516009 SPOPO43791 374 aa8.08□□□□□ -1.12
SCARNA20.1-201ENST00000516009 TADA3O75528 432 aa8.08□□□□□ -1.12
SCARNA20.1-201ENST00000516009 LMO2P25791 158 aa8.08□□□□□ -1.12
SCARNA20.1-201ENST00000516009 CXCR5P32302 372 aa8.08□□□□□ -1.12
SCARNA20.1-201ENST00000516009 RFC2P35250 354 aa8.08□□□□□ -1.12
SCARNA20.1-201ENST00000516009 PAFAH1B1P43034 410 aa8.08□□□□□ -1.12
SCARNA20.1-201ENST00000516009 GPD2P43304 727 aa8.08□□□□□ -1.12
SCARNA20.1-201ENST00000516009 AARSP49588 968 aaKnown RBP eCLIP8.08□□□□□ -1.12
SCARNA20.1-201ENST00000516009 PSMC1P62191 440 aaKnown RBP8.08□□□□□ -1.12
SCARNA20.1-201ENST00000516009 TUBB4BP68371 445 aa8.08□□□□□ -1.12
SCARNA20.1-201ENST00000516009 PDCLQ13371 301 aa8.08□□□□□ -1.12
SCARNA20.1-201ENST00000516009 MAMLD1Q13495 774 aa8.08□□□□□ -1.12
SCARNA20.1-201ENST00000516009 PTPROQ16827 1216 aa8.08□□□□□ -1.12
SCARNA20.1-201ENST00000516009 CFAP221Q4G0U5 840 aa8.08□□□□□ -1.12
SCARNA20.1-201ENST00000516009 PTPN20Q4JDL3 420 aa8.08□□□□□ -1.12
SCARNA20.1-201ENST00000516009 TIGD5Q53EQ6 642 aa8.08□□□□□ -1.12
SCARNA20.1-201ENST00000516009 PPP1R26Q5T8A7 1209 aaPredicted RBP8.08□□□□□ -1.12
SCARNA20.1-201ENST00000516009 CYP4A22Q5TCH4 519 aa8.08□□□□□ -1.12
SCARNA20.1-201ENST00000516009 LLGL2Q6P1M3 1020 aa8.08□□□□□ -1.12
SCARNA20.1-201ENST00000516009 DCUN1D2Q6PH85 259 aa8.08□□□□□ -1.12
SCARNA20.1-201ENST00000516009 NECAB2Q7Z6G3 386 aa8.08□□□□□ -1.12
SCARNA20.1-201ENST00000516009 DEFB128Q7Z7B8 93 aa8.08□□□□□ -1.12
SCARNA20.1-201ENST00000516009 METTL23Q86XA0 190 aa8.08□□□□□ -1.12
SCARNA20.1-201ENST00000516009 CREG2Q8IUH2 290 aa8.08□□□□□ -1.12
SCARNA20.1-201ENST00000516009 UBL4BQ8N7F7 174 aa8.08□□□□□ -1.12
SCARNA20.1-201ENST00000516009 B3GALNT2Q8NCR0 500 aa8.08□□□□□ -1.12
SCARNA20.1-201ENST00000516009 C3orf20Q8ND61 904 aa8.08□□□□□ -1.12
SCARNA20.1-201ENST00000516009 LRRN4CLQ8ND94 238 aa8.08□□□□□ -1.12
SCARNA20.1-201ENST00000516009 FEZF2Q8TBJ5 459 aa8.08□□□□□ -1.12
SCARNA20.1-201ENST00000516009 SPATA18Q8TC71 538 aa8.08□□□□□ -1.12
SCARNA20.1-201ENST00000516009 COG1Q8WTW3 980 aa8.08□□□□□ -1.12
SCARNA20.1-201ENST00000516009 UBXN4Q92575 508 aa8.08□□□□□ -1.12
SCARNA20.1-201ENST00000516009 GOLGA1Q92805 767 aa8.08□□□□□ -1.12
SCARNA20.1-201ENST00000516009 C18orf8Q96DM3 657 aa8.08□□□□□ -1.12
SCARNA20.1-201ENST00000516009 HES6Q96HZ4 224 aa8.08□□□□□ -1.12
SCARNA20.1-201ENST00000516009 PBKQ96KB5 322 aa8.08□□□□□ -1.12
SCARNA20.1-201ENST00000516009 BTBD6Q96KE9 485 aa8.08□□□□□ -1.12
SCARNA20.1-201ENST00000516009 RPGRIP1Q96KN7 1286 aa8.08□□□□□ -1.12
SCARNA20.1-201ENST00000516009 MIS12Q9H081 205 aa8.08□□□□□ -1.12
SCARNA20.1-201ENST00000516009 FAM49BQ9NUQ9 324 aa8.08□□□□□ -1.12
SCARNA20.1-201ENST00000516009 TBC1D13Q9NVG8 400 aa8.08□□□□□ -1.12
SCARNA20.1-201ENST00000516009 DDX43Q9NXZ2 648 aaKnown RBP8.08□□□□□ -1.12
SCARNA20.1-201ENST00000516009 RNF14Q9UBS8 474 aa8.08□□□□□ -1.12
SCARNA20.1-201ENST00000516009 IP6K2Q9UHH9 426 aa8.08□□□□□ -1.12
SCARNA20.1-201ENST00000516009 CYTH4Q9UIA0 394 aa8.08□□□□□ -1.12
SCARNA20.1-201ENST00000516009 LCMT1Q9UIC8 334 aa8.08□□□□□ -1.12
SCARNA20.1-201ENST00000516009 DSEQ9UL01 958 aa8.08□□□□□ -1.12
SCARNA20.1-201ENST00000516009 LTBP2Q14767 1821 aa8.08□□□□□ -1.12
SCARNA20.1-201ENST00000516009 I3L4J1 428 aa8.07□□□□□ -1.12
SCARNA20.1-201ENST00000516009 DYNC1I1O14576 645 aa8.07□□□□□ -1.12
SCARNA20.1-201ENST00000516009 DDHD2O94830 711 aa8.07□□□□□ -1.12
SCARNA20.1-201ENST00000516009 PROSCO94903 275 aa8.07□□□□□ -1.12
SCARNA20.1-201ENST00000516009 CCDC130P13994 396 aa8.07□□□□□ -1.12
SCARNA20.1-201ENST00000516009 PTPN1P18031 435 aaKnown RBP8.07□□□□□ -1.12
SCARNA20.1-201ENST00000516009 COMTP21964 271 aa8.07□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms