RNA–Protein interactions for RNA: ENST00000515594.5

PHF3-212, Transcript of PHD finger protein 3, humanhuman

TSL 2

Gene PHF3, Length 3,074 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF3-212ENST00000515594 MRPL47Q9HD33 250 aaKnown RBP13.58□□□□□ -0.24
PHF3-212ENST00000515594 CYP26B1Q9NR63 512 aa13.58□□□□□ -0.24
PHF3-212ENST00000515594 HEY2Q9UBP5 337 aa13.58□□□□□ -0.24
PHF3-212ENST00000515594 AGTPBP1Q9UPW5 1226 aa13.58□□□□□ -0.24
PHF3-212ENST00000515594 TMEM191CA6NGB0 347 aa13.58□□□□□ -0.24
PHF3-212ENST00000515594 EXTL3O43909 919 aa13.58□□□□□ -0.24
PHF3-212ENST00000515594 CST8O60676 142 aa13.58□□□□□ -0.24
PHF3-212ENST00000515594 TMEM191BP0C7N4 346 aa13.58□□□□□ -0.24
PHF3-212ENST00000515594 RFC1P35251 1148 aaPredicted RBP13.58□□□□□ -0.24
PHF3-212ENST00000515594 VCPP55072 806 aaKnown RBP13.58□□□□□ -0.24
PHF3-212ENST00000515594 BASP1P80723 227 aaKnown RBP13.58□□□□□ -0.24
PHF3-212ENST00000515594 SP2Q02086 613 aa13.58□□□□□ -0.24
PHF3-212ENST00000515594 NCOA4Q13772 614 aa13.58□□□□□ -0.24
PHF3-212ENST00000515594 FAXCQ5TGI0 409 aa13.58□□□□□ -0.24
PHF3-212ENST00000515594 GPAT2Q6NUI2 795 aa13.58□□□□□ -0.24
PHF3-212ENST00000515594 SAMD3Q8N6K7 520 aa13.58□□□□□ -0.24
PHF3-212ENST00000515594 FAM71DQ8N9W8 422 aa13.58□□□□□ -0.24
PHF3-212ENST00000515594 SHKBP1Q8TBC3 707 aa13.58□□□□□ -0.24
PHF3-212ENST00000515594 CPT1BQ92523 772 aa13.58□□□□□ -0.24
PHF3-212ENST00000515594 CADM1Q9BY67 442 aaKnown RBP13.58□□□□□ -0.24
PHF3-212ENST00000515594 PARVAQ9NVD7 372 aa13.58□□□□□ -0.24
PHF3-212ENST00000515594 ARHGAP28Q9P2N2 729 aa13.58□□□□□ -0.24
PHF3-212ENST00000515594 PSMC3IPQ9P2W1 217 aaPredicted RBP13.58□□□□□ -0.24
PHF3-212ENST00000515594 COL4A5P29400 1685 aa13.57□□□□□ -0.24
PHF3-212ENST00000515594 CCDC195A0A1B0GUA6 201 aa13.57□□□□□ -0.24
PHF3-212ENST00000515594 PRPF4O43172 522 aaKnown RBP eCLIP13.57□□□□□ -0.24
PHF3-212ENST00000515594 TJP3O95049 919 aa13.57□□□□□ -0.24
PHF3-212ENST00000515594 TOP3BO95985 862 aaKnown RBP13.57□□□□□ -0.24
PHF3-212ENST00000515594 BGNP21810 368 aa13.57□□□□□ -0.24
PHF3-212ENST00000515594 MMP8P22894 467 aa13.57□□□□□ -0.24
PHF3-212ENST00000515594 CDKN2BP42772 138 aa13.57□□□□□ -0.24
PHF3-212ENST00000515594 MYL6P60660 151 aa13.57□□□□□ -0.24
PHF3-212ENST00000515594 KPNB1Q14974 876 aaKnown RBP13.57□□□□□ -0.24
PHF3-212ENST00000515594 SEPT7Q16181 437 aaKnown RBP13.57□□□□□ -0.24
PHF3-212ENST00000515594 CTC1Q2NKJ3 1217 aa13.57□□□□□ -0.24
PHF3-212ENST00000515594 SPDYE2Q495Y8 402 aa13.57□□□□□ -0.24
PHF3-212ENST00000515594 THEMIS2Q5TEJ8 643 aa13.57□□□□□ -0.24
PHF3-212ENST00000515594 RSBN1LQ6PCB5 846 aaPredicted RBP13.57□□□□□ -0.24
PHF3-212ENST00000515594 DPH6Q7L8W6 267 aa13.57□□□□□ -0.24
PHF3-212ENST00000515594 TEX2Q8IWB9 1127 aa13.57□□□□□ -0.24
PHF3-212ENST00000515594 WDTC1Q8N5D0 677 aa13.57□□□□□ -0.24
PHF3-212ENST00000515594 ARFGAP1Q8N6T3 406 aa13.57□□□□□ -0.24
PHF3-212ENST00000515594 TMEM174Q8WUU8 243 aa13.57□□□□□ -0.24
PHF3-212ENST00000515594 WDR60Q8WVS4 1066 aa13.57□□□□□ -0.24
PHF3-212ENST00000515594 SERAC1Q96JX3 654 aa13.57□□□□□ -0.24
PHF3-212ENST00000515594 FAM81BQ96LP2 452 aa13.57□□□□□ -0.24
PHF3-212ENST00000515594 FAM111AQ96PZ2 611 aa13.57□□□□□ -0.24
PHF3-212ENST00000515594 PDGFDQ9GZP0 370 aaPredicted RBP13.57□□□□□ -0.24
PHF3-212ENST00000515594 RNF146Q9NTX7 359 aa13.57□□□□□ -0.24
PHF3-212ENST00000515594 ANKEF1Q9NU02 776 aa13.57□□□□□ -0.24
PHF3-212ENST00000515594 MARCOQ9UEW3 520 aaPredicted RBP13.57□□□□□ -0.24
PHF3-212ENST00000515594 CTDP1Q9Y5B0 961 aaPredicted RBP13.57□□□□□ -0.24
PHF3-212ENST00000515594 NEFHP12036 1026 aa13.57□□□□□ -0.24
PHF3-212ENST00000515594 JAK3P52333 1124 aa13.57□□□□□ -0.24
PHF3-212ENST00000515594 KRT76Q01546 638 aa13.57□□□□□ -0.24
PHF3-212ENST00000515594 BLMHQ13867 455 aa13.57□□□□□ -0.24
PHF3-212ENST00000515594 CENPUQ71F23 418 aa13.57□□□□□ -0.24
PHF3-212ENST00000515594 ZC3H18Q86VM9 953 aaKnown RBP13.57□□□□□ -0.24
PHF3-212ENST00000515594 ZNF276Q8N554 614 aa13.57□□□□□ -0.24
PHF3-212ENST00000515594 SYT15Q9BQS2 421 aa13.57□□□□□ -0.24
PHF3-212ENST00000515594 RPAP3Q9H6T3 665 aaPredicted RBP13.57□□□□□ -0.24
PHF3-212ENST00000515594 ACTL7BQ9Y614 415 aa13.57□□□□□ -0.24
PHF3-212ENST00000515594 BPTFQ12830 3046 aa13.57□□□□□ -0.24
PHF3-212ENST00000515594 ALOX15BO15296 676 aa13.56□□□□□ -0.24
PHF3-212ENST00000515594 ASNSP08243 561 aa13.56□□□□□ -0.24
PHF3-212ENST00000515594 ABHD2P08910 425 aa13.56□□□□□ -0.24
PHF3-212ENST00000515594 ATP4AP20648 1035 aa13.56□□□□□ -0.24
PHF3-212ENST00000515594 ACTR2P61160 394 aa13.56□□□□□ -0.24
PHF3-212ENST00000515594 CCDC15Q0P6D6 951 aa13.56□□□□□ -0.24
PHF3-212ENST00000515594 MMRN1Q13201 1228 aa13.56□□□□□ -0.24
PHF3-212ENST00000515594 PSMD6Q15008 389 aa13.56□□□□□ -0.24
PHF3-212ENST00000515594 SH3PXD2AQ5TCZ1 1133 aa13.56□□□□□ -0.24
PHF3-212ENST00000515594 DHX30Q7L2E3 1194 aaKnown RBP eCLIP13.56□□□□□ -0.24
PHF3-212ENST00000515594 PHF13Q86YI8 300 aaPredicted RBP13.56□□□□□ -0.24
PHF3-212ENST00000515594 LARGE2Q8N3Y3 721 aa13.56□□□□□ -0.24
PHF3-212ENST00000515594 BBOF1Q8ND07 529 aa13.56□□□□□ -0.24
PHF3-212ENST00000515594 NRG4Q8WWG1 115 aa13.56□□□□□ -0.24
PHF3-212ENST00000515594 GRAMD1AQ96CP6 724 aa13.56□□□□□ -0.24
PHF3-212ENST00000515594 NTPCRQ9BSD7 190 aaKnown RBP13.56□□□□□ -0.24
PHF3-212ENST00000515594 MAGEB2O15479 319 aa13.56□□□□□ -0.24
PHF3-212ENST00000515594 KITP10721 976 aa13.56□□□□□ -0.24
PHF3-212ENST00000515594 KCNA2P16389 499 aa13.56□□□□□ -0.24
PHF3-212ENST00000515594 RPL22P35268 128 aaKnown RBP13.56□□□□□ -0.24
PHF3-212ENST00000515594 GEMIN4P57678 1058 aaKnown RBP13.56□□□□□ -0.24
PHF3-212ENST00000515594 EMC2Q15006 297 aa13.56□□□□□ -0.24
PHF3-212ENST00000515594 RCN1Q15293 331 aa13.56□□□□□ -0.24
PHF3-212ENST00000515594 TFDP3Q5H9I0 405 aa13.56□□□□□ -0.24
PHF3-212ENST00000515594 CDHR3Q6ZTQ4 885 aa13.56□□□□□ -0.24
PHF3-212ENST00000515594 USP37Q86T82 979 aa13.56□□□□□ -0.24
PHF3-212ENST00000515594 ALYREFQ86V81 257 aaKnown RBP13.56□□□□□ -0.24
PHF3-212ENST00000515594 MCF2L2Q86YR7 1114 aa13.56□□□□□ -0.24
PHF3-212ENST00000515594 HSPH1Q92598 858 aa13.56□□□□□ -0.24
PHF3-212ENST00000515594 TRIM11Q96F44 468 aa13.56□□□□□ -0.24
PHF3-212ENST00000515594 CYLDQ9NQC7 956 aa13.56□□□□□ -0.24
PHF3-212ENST00000515594 IP6K2Q9UHH9 426 aa13.56□□□□□ -0.24
PHF3-212ENST00000515594 CYTH4Q9UIA0 394 aa13.56□□□□□ -0.24
PHF3-212ENST00000515594 ZNRF3Q9ULT6 936 aa13.56□□□□□ -0.24
PHF3-212ENST00000515594 DCTN3O75935 186 aa13.55□□□□□ -0.24
PHF3-212ENST00000515594 GARTP22102 1010 aa13.55□□□□□ -0.24
PHF3-212ENST00000515594 ALDH3A1P30838 453 aa13.55□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms