RNA–Protein interactions for RNA: ENST00000515585.1

ABCC3-216, Transcript of ATP binding cassette subfamily C member 3, humanhuman

TSL 3

Gene ABCC3, Length 484 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCC3-216ENST00000515585 SENP8Q96LD8 212 aa14.65□□□□□ -0.06
ABCC3-216ENST00000515585 ALS2CR12Q96Q35 445 aa14.65□□□□□ -0.06
ABCC3-216ENST00000515585 TUBB2BQ9BVA1 445 aa14.65□□□□□ -0.06
ABCC3-216ENST00000515585 PPP1R12CQ9BZL4 782 aa14.65□□□□□ -0.06
ABCC3-216ENST00000515585 KANSL3Q9P2N6 904 aa14.65□□□□□ -0.06
ABCC3-216ENST00000515585 ATP11BQ9Y2G3 1177 aa14.65□□□□□ -0.06
ABCC3-216ENST00000515585 TRIM43BA6NCK2 446 aa14.64□□□□□ -0.07
ABCC3-216ENST00000515585 CASTOR2A6NHX0 329 aa14.64□□□□□ -0.07
ABCC3-216ENST00000515585 CYB561D2O14569 222 aa14.64□□□□□ -0.07
ABCC3-216ENST00000515585 RIOK3O14730 519 aaKnown RBP14.64□□□□□ -0.07
ABCC3-216ENST00000515585 BUB1BO60566 1050 aaPredicted RBP14.64□□□□□ -0.07
ABCC3-216ENST00000515585 HUS1O60921 280 aa14.64□□□□□ -0.07
ABCC3-216ENST00000515585 MICAL2O94851 1124 aa14.64□□□□□ -0.07
ABCC3-216ENST00000515585 TIMP1P01033 207 aa14.64□□□□□ -0.07
ABCC3-216ENST00000515585 ITGB8P26012 769 aa14.64□□□□□ -0.07
ABCC3-216ENST00000515585 NSFP46459 744 aaKnown RBP14.64□□□□□ -0.07
ABCC3-216ENST00000515585 GABRB2P47870 512 aa14.64□□□□□ -0.07
ABCC3-216ENST00000515585 CCL23P55773 120 aa14.64□□□□□ -0.07
ABCC3-216ENST00000515585 ORC1Q13415 861 aa14.64□□□□□ -0.07
ABCC3-216ENST00000515585 SGO2Q562F6 1265 aa14.64□□□□□ -0.07
ABCC3-216ENST00000515585 PPP1R15BQ5SWA1 713 aa14.64□□□□□ -0.07
ABCC3-216ENST00000515585 DCLRE1AQ6PJP8 1040 aa14.64□□□□□ -0.07
ABCC3-216ENST00000515585 ZNF280BQ86YH2 543 aa14.64□□□□□ -0.07
ABCC3-216ENST00000515585 NPAS4Q8IUM7 802 aa14.64□□□□□ -0.07
ABCC3-216ENST00000515585 PASD1Q8IV76 773 aa14.64□□□□□ -0.07
ABCC3-216ENST00000515585 ADGRF2Q8IZF7 708 aa14.64□□□□□ -0.07
ABCC3-216ENST00000515585 RNF169Q8NCN4 708 aa14.64□□□□□ -0.07
ABCC3-216ENST00000515585 C1orf131Q8NDD1 294 aaKnown RBP14.64□□□□□ -0.07
ABCC3-216ENST00000515585 TRIM43Q96BQ3 446 aaPredicted RBP14.64□□□□□ -0.07
ABCC3-216ENST00000515585 ZNF653Q96CK0 615 aa14.64□□□□□ -0.07
ABCC3-216ENST00000515585 RTP3Q9BQQ7 232 aa14.64□□□□□ -0.07
ABCC3-216ENST00000515585 DPEP3Q9H4B8 488 aa14.64□□□□□ -0.07
ABCC3-216ENST00000515585 TMEM39AQ9NV64 488 aa14.64□□□□□ -0.07
ABCC3-216ENST00000515585 CNOT8Q9UFF9 292 aaKnown RBP14.64□□□□□ -0.07
ABCC3-216ENST00000515585 CDC23Q9UJX2 597 aa14.64□□□□□ -0.07
ABCC3-216ENST00000515585 HCRTO43612 131 aa14.63□□□□□ -0.07
ABCC3-216ENST00000515585 CLSTN1O94985 981 aa14.63□□□□□ -0.07
ABCC3-216ENST00000515585 SETSIPP0DME0 302 aa14.63□□□□□ -0.07
ABCC3-216ENST00000515585 CD19P15391 556 aa14.63□□□□□ -0.07
ABCC3-216ENST00000515585 SYN1P17600 705 aa14.63□□□□□ -0.07
ABCC3-216ENST00000515585 RRM1P23921 792 aa14.63□□□□□ -0.07
ABCC3-216ENST00000515585 LMO2P25791 158 aa14.63□□□□□ -0.07
ABCC3-216ENST00000515585 GTF2F1P35269 517 aaKnown RBP eCLIP14.63□□□□□ -0.07
ABCC3-216ENST00000515585 GNL1P36915 607 aaPredicted RBP14.63□□□□□ -0.07
ABCC3-216ENST00000515585 PTPN20Q4JDL3 420 aa14.63□□□□□ -0.07
ABCC3-216ENST00000515585 KIAA0319Q5VV43 1072 aa14.63□□□□□ -0.07
ABCC3-216ENST00000515585 WSCD1Q658N2 575 aa14.63□□□□□ -0.07
ABCC3-216ENST00000515585 ACOT1Q86TX2 421 aa14.63□□□□□ -0.07
ABCC3-216ENST00000515585 NT5DC3Q86UY8 548 aa14.63□□□□□ -0.07
ABCC3-216ENST00000515585 TTC30AQ86WT1 665 aa14.63□□□□□ -0.07
ABCC3-216ENST00000515585 SUSD3Q96L08 255 aa14.63□□□□□ -0.07
ABCC3-216ENST00000515585 GUCD1Q96NT3 240 aa14.63□□□□□ -0.07
ABCC3-216ENST00000515585 PKMYT1Q99640 499 aa14.63□□□□□ -0.07
ABCC3-216ENST00000515585 UBE2OQ9C0C9 1292 aaKnown RBP14.63□□□□□ -0.07
ABCC3-216ENST00000515585 RC3H2Q9HBD1 1191 aaKnown RBP14.63□□□□□ -0.07
ABCC3-216ENST00000515585 ADAM22Q9P0K1 906 aa14.63□□□□□ -0.07
ABCC3-216ENST00000515585 PUF60Q9UHX1 559 aaKnown RBP14.63□□□□□ -0.07
ABCC3-216ENST00000515585 TSPAN16Q9UKR8 245 aa14.63□□□□□ -0.07
ABCC3-216ENST00000515585 SNX12Q9UMY4 172 aa14.63□□□□□ -0.07
ABCC3-216ENST00000515585 INPP5FQ9Y2H2 1132 aa14.63□□□□□ -0.07
ABCC3-216ENST00000515585 A8MXQ7 604 aa14.62□□□□□ -0.07
ABCC3-216ENST00000515585 ENC1O14682 589 aa14.62□□□□□ -0.07
ABCC3-216ENST00000515585 ATMINO43313 823 aaPredicted RBP14.62□□□□□ -0.07
ABCC3-216ENST00000515585 HOXA2O43364 376 aa14.62□□□□□ -0.07
ABCC3-216ENST00000515585 URI1O94763 535 aaPredicted RBP14.62□□□□□ -0.07
ABCC3-216ENST00000515585 KIF4AO95239 1232 aa14.62□□□□□ -0.07
ABCC3-216ENST00000515585 EFEMP2O95967 443 aa14.62□□□□□ -0.07
ABCC3-216ENST00000515585 ITGB1P05556 798 aa14.62□□□□□ -0.07
ABCC3-216ENST00000515585 CALB1P05937 261 aa14.62□□□□□ -0.07
ABCC3-216ENST00000515585 TYMPP19971 482 aa14.62□□□□□ -0.07
ABCC3-216ENST00000515585 LHX1P48742 406 aa14.62□□□□□ -0.07
ABCC3-216ENST00000515585 PPP1R26Q5T8A7 1209 aaPredicted RBP14.62□□□□□ -0.07
ABCC3-216ENST00000515585 FAM109BQ6ICB4 259 aaPredicted RBP14.62□□□□□ -0.07
ABCC3-216ENST00000515585 MMS22LQ6ZRQ5 1243 aa14.62□□□□□ -0.07
ABCC3-216ENST00000515585 C12orf29Q8N999 325 aa14.62□□□□□ -0.07
ABCC3-216ENST00000515585 MYRIPQ8NFW9 859 aa14.62□□□□□ -0.07
ABCC3-216ENST00000515585 OR6B3Q8NGW1 331 aa14.62□□□□□ -0.07
ABCC3-216ENST00000515585 ZNF564Q8TBZ8 553 aaPredicted RBP14.62□□□□□ -0.07
ABCC3-216ENST00000515585 URGCPQ8TCY9 931 aa14.62□□□□□ -0.07
ABCC3-216ENST00000515585 STK32AQ8WU08 396 aa14.62□□□□□ -0.07
ABCC3-216ENST00000515585 SLC35F5Q8WV83 523 aa14.62□□□□□ -0.07
ABCC3-216ENST00000515585 CD101Q93033 1021 aa14.62□□□□□ -0.07
ABCC3-216ENST00000515585 HES6Q96HZ4 224 aa14.62□□□□□ -0.07
ABCC3-216ENST00000515585 HEXIM2Q96MH2 286 aaKnown RBP14.62□□□□□ -0.07
ABCC3-216ENST00000515585 HNRNPABQ99729 332 aaKnown RBP14.62□□□□□ -0.07
ABCC3-216ENST00000515585 C11orf70Q9BRQ4 267 aa14.62□□□□□ -0.07
ABCC3-216ENST00000515585 NUP85Q9BW27 656 aa14.62□□□□□ -0.07
ABCC3-216ENST00000515585 RNF216Q9NWF9 866 aaPredicted RBP14.62□□□□□ -0.07
ABCC3-216ENST00000515585 LAMA2P24043 3122 aaKnown RBP14.61□□□□□ -0.07
ABCC3-216ENST00000515585 CES2O00748 559 aa14.61□□□□□ -0.07
ABCC3-216ENST00000515585 COL9A1P20849 921 aa14.61□□□□□ -0.07
ABCC3-216ENST00000515585 SSTR3P32745 418 aaPredicted RBP14.61□□□□□ -0.07
ABCC3-216ENST00000515585 BRCC3P46736 316 aa14.61□□□□□ -0.07
ABCC3-216ENST00000515585 PDCLQ13371 301 aa14.61□□□□□ -0.07
ABCC3-216ENST00000515585 MAMLD1Q13495 774 aa14.61□□□□□ -0.07
ABCC3-216ENST00000515585 PAQR9Q6ZVX9 377 aa14.61□□□□□ -0.07
ABCC3-216ENST00000515585 ZNF572Q7Z3I7 529 aaPredicted RBP14.61□□□□□ -0.07
ABCC3-216ENST00000515585 SYCE1Q8N0S2 351 aa14.61□□□□□ -0.07
ABCC3-216ENST00000515585 C3orf20Q8ND61 904 aa14.61□□□□□ -0.07
ABCC3-216ENST00000515585 TNIP3Q96KP6 325 aa14.61□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 68.5 ms