RNA–Protein interactions for RNA: ENST00000515459.5

LMNA-223, Transcript of lamin A/C, humanhuman

TSL 5

Gene LMNA, Length 757 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-223ENST00000515459 GALK1P51570 392 aa17■□□□□ 0.31
LMNA-223ENST00000515459 ZNF131P52739 623 aa17■□□□□ 0.31
LMNA-223ENST00000515459 PDGFRLQ15198 375 aa17■□□□□ 0.31
LMNA-223ENST00000515459 ELF2Q15723 593 aa17■□□□□ 0.31
LMNA-223ENST00000515459 FBXO43Q4G163 708 aa17■□□□□ 0.31
LMNA-223ENST00000515459 WSCD1Q658N2 575 aa17■□□□□ 0.31
LMNA-223ENST00000515459 ARL6IP4Q66PJ3 421 aaKnown RBP17■□□□□ 0.31
LMNA-223ENST00000515459 RNF43Q68DV7 783 aa17■□□□□ 0.31
LMNA-223ENST00000515459 TXNDC8Q6A555 127 aa17■□□□□ 0.31
LMNA-223ENST00000515459 MRPS31Q92665 395 aaKnown RBP17■□□□□ 0.31
LMNA-223ENST00000515459 P2RY13Q9BPV8 354 aa17■□□□□ 0.31
LMNA-223ENST00000515459 CCSER1Q9C0I3 900 aa17■□□□□ 0.31
LMNA-223ENST00000515459 DUSP15Q9H1R2 295 aaPredicted RBP17■□□□□ 0.31
LMNA-223ENST00000515459 FBRSL1Q9HCM7 1045 aaKnown RBP17■□□□□ 0.31
LMNA-223ENST00000515459 DPP3Q9NY33 737 aa17■□□□□ 0.31
LMNA-223ENST00000515459 KIF3AQ9Y496 699 aa17■□□□□ 0.31
LMNA-223ENST00000515459 PCDHB5Q9Y5E4 795 aa17■□□□□ 0.31
LMNA-223ENST00000515459 KIAA1549LQ6ZVL6 1849 aa16.99■□□□□ 0.31
LMNA-223ENST00000515459 SLC26A4O43511 780 aa16.99■□□□□ 0.31
LMNA-223ENST00000515459 RHOBTB1O94844 696 aa16.99■□□□□ 0.31
LMNA-223ENST00000515459 KRT18P05783 430 aaKnown RBP16.99■□□□□ 0.31
LMNA-223ENST00000515459 GJA4P35212 333 aa16.99■□□□□ 0.31
LMNA-223ENST00000515459 GTF2BQ00403 316 aa16.99■□□□□ 0.31
LMNA-223ENST00000515459 DHX8Q14562 1220 aaKnown RBP16.99■□□□□ 0.31
LMNA-223ENST00000515459 KARSQ15046 597 aaKnown RBP16.99■□□□□ 0.31
LMNA-223ENST00000515459 SV2CQ496J9 727 aa16.99■□□□□ 0.31
LMNA-223ENST00000515459 ADALQ6DHV7 355 aa16.99■□□□□ 0.31
LMNA-223ENST00000515459 SYT13Q7L8C5 426 aa16.99■□□□□ 0.31
LMNA-223ENST00000515459 MON1AQ86VX9 555 aa16.99■□□□□ 0.31
LMNA-223ENST00000515459 CALML4Q96GE6 196 aa16.99■□□□□ 0.31
LMNA-223ENST00000515459 AK8Q96MA6 479 aa16.99■□□□□ 0.31
LMNA-223ENST00000515459 ZHX3Q9H4I2 956 aa16.99■□□□□ 0.31
LMNA-223ENST00000515459 POLR3BQ9NW08 1133 aaPredicted RBP16.99■□□□□ 0.31
LMNA-223ENST00000515459 MAGED2Q9UNF1 606 aaPredicted RBP16.99■□□□□ 0.31
LMNA-223ENST00000515459 MYO16Q9Y6X6 1858 aa16.99■□□□□ 0.31
LMNA-223ENST00000515459 KPNA7A9QM74 516 aa16.98■□□□□ 0.31
LMNA-223ENST00000515459 ANKRD63C9JTQ0 380 aa16.98■□□□□ 0.31
LMNA-223ENST00000515459 PRPF40AO75400 957 aaKnown RBP16.98■□□□□ 0.31
LMNA-223ENST00000515459 CSH1P0DML2 217 aa16.98■□□□□ 0.31
LMNA-223ENST00000515459 CSH2P0DML3 217 aa16.98■□□□□ 0.31
LMNA-223ENST00000515459 TSPY1Q01534 308 aa16.98■□□□□ 0.31
LMNA-223ENST00000515459 ZNF268Q14587 947 aaPredicted RBP16.98■□□□□ 0.31
LMNA-223ENST00000515459 NFE2Q16621 373 aaPredicted RBP16.98■□□□□ 0.31
LMNA-223ENST00000515459 SLFN12LQ6IEE8 588 aa16.98■□□□□ 0.31
LMNA-223ENST00000515459 TCEAL6Q6IPX3 200 aa16.98■□□□□ 0.31
LMNA-223ENST00000515459 PSAPL1Q6NUJ1 521 aa16.98■□□□□ 0.31
LMNA-223ENST00000515459 CPA6Q8N4T0 437 aa16.98■□□□□ 0.31
LMNA-223ENST00000515459 RPLP0P6Q8NHW5 317 aa16.98■□□□□ 0.31
LMNA-223ENST00000515459 RIN3Q8TB24 985 aa16.98■□□□□ 0.31
LMNA-223ENST00000515459 TCEAL3Q969E4 200 aa16.98■□□□□ 0.31
LMNA-223ENST00000515459 PI4K2AQ9BTU6 479 aa16.98■□□□□ 0.31
LMNA-223ENST00000515459 ECT2Q9H8V3 914 aa16.98■□□□□ 0.31
LMNA-223ENST00000515459 EBF1Q9UH73 591 aa16.98■□□□□ 0.31
LMNA-223ENST00000515459 AGO2Q9UKV8 859 aaKnown RBP16.98■□□□□ 0.31
LMNA-223ENST00000515459 TBCAO75347 108 aaKnown RBP16.97■□□□□ 0.31
LMNA-223ENST00000515459 APBB3O95704 486 aa16.97■□□□□ 0.31
LMNA-223ENST00000515459 CAVIN2O95810 425 aa16.97■□□□□ 0.31
LMNA-223ENST00000515459 UBA7P41226 1012 aa16.97■□□□□ 0.31
LMNA-223ENST00000515459 POU5F1Q01860 360 aaKnown RBP16.97■□□□□ 0.31
LMNA-223ENST00000515459 CREB5Q02930 508 aa16.97■□□□□ 0.31
LMNA-223ENST00000515459 MTF1Q14872 753 aa16.97■□□□□ 0.31
LMNA-223ENST00000515459 CD101Q93033 1021 aa16.97■□□□□ 0.31
LMNA-223ENST00000515459 ACDQ96AP0 544 aa16.97■□□□□ 0.31
LMNA-223ENST00000515459 ZNF560Q96MR9 790 aa16.97■□□□□ 0.31
LMNA-223ENST00000515459 FIZ1Q96SL8 496 aa16.97■□□□□ 0.31
LMNA-223ENST00000515459 EDEM2Q9BV94 578 aa16.97■□□□□ 0.31
LMNA-223ENST00000515459 TMLHEQ9NVH6 421 aa16.97■□□□□ 0.31
LMNA-223ENST00000515459 DUS2Q9NX74 493 aaKnown RBP16.97■□□□□ 0.31
LMNA-223ENST00000515459 UXTQ9UBK9 157 aaPredicted RBP16.97■□□□□ 0.31
LMNA-223ENST00000515459 STYXL1Q9Y6J8 313 aa16.97■□□□□ 0.31
LMNA-223ENST00000515459 CHD6Q8TD26 2715 aa16.97■□□□□ 0.31
LMNA-223ENST00000515459 NUP205Q92621 2012 aa16.96■□□□□ 0.31
LMNA-223ENST00000515459 CFAP47Q6ZTR5 3102 aa16.96■□□□□ 0.31
LMNA-223ENST00000515459 TISP43B9A030 160 aa16.96■□□□□ 0.31
LMNA-223ENST00000515459 DCLK1O15075 740 aa16.96■□□□□ 0.31
LMNA-223ENST00000515459 PROS1P07225 676 aa16.96■□□□□ 0.31
LMNA-223ENST00000515459 GPR15P49685 360 aa16.96■□□□□ 0.31
LMNA-223ENST00000515459 NOVA1P51513 510 aaKnown RBP16.96■□□□□ 0.31
LMNA-223ENST00000515459 RPL10AP62906 217 aaKnown RBP16.96■□□□□ 0.31
LMNA-223ENST00000515459 FAM160A1Q05DH4 1040 aa16.96■□□□□ 0.31
LMNA-223ENST00000515459 PSMD2Q13200 908 aa16.96■□□□□ 0.31
LMNA-223ENST00000515459 DMC1Q14565 340 aa16.96■□□□□ 0.31
LMNA-223ENST00000515459 ZC2HC1CQ53FD0 456 aaPredicted RBP16.96■□□□□ 0.31
LMNA-223ENST00000515459 NAIF1Q69YI7 327 aaPredicted RBP16.96■□□□□ 0.31
LMNA-223ENST00000515459 NT5DC4Q86YG4 428 aa16.96■□□□□ 0.31
LMNA-223ENST00000515459 EFCAB13Q8IY85 973 aa16.96■□□□□ 0.31
LMNA-223ENST00000515459 STKLD1Q8NE28 680 aa16.96■□□□□ 0.31
LMNA-223ENST00000515459 LRRC15Q8TF66 581 aa16.96■□□□□ 0.31
LMNA-223ENST00000515459 OSCP1Q8WVF1 389 aa16.96■□□□□ 0.31
LMNA-223ENST00000515459 BLOC1S4Q9NUP1 217 aa16.96■□□□□ 0.31
LMNA-223ENST00000515459 BCLAF3A2AJT9 711 aaKnown RBP16.95■□□□□ 0.3
LMNA-223ENST00000515459 NEFLP07196 543 aa16.95■□□□□ 0.3
LMNA-223ENST00000515459 USP17L7P0C7H9 530 aa16.95■□□□□ 0.3
LMNA-223ENST00000515459 GBP1P32455 592 aa16.95■□□□□ 0.3
LMNA-223ENST00000515459 PNPLA4P41247 253 aa16.95■□□□□ 0.3
LMNA-223ENST00000515459 IFNAR2P48551 515 aa16.95■□□□□ 0.3
LMNA-223ENST00000515459 MCM6Q14566 821 aa16.95■□□□□ 0.3
LMNA-223ENST00000515459 SDHAF4Q5VUM1 108 aa16.95■□□□□ 0.3
LMNA-223ENST00000515459 DAB2IPQ5VWQ8 1189 aa16.95■□□□□ 0.3
LMNA-223ENST00000515459 TTC16Q8NEE8 873 aa16.95■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 54.3 ms