RNA–Protein interactions for RNA: ENST00000515063.1

CAST-242, Transcript of calpastatin, humanhuman

TSL 1 (best)

Gene CAST, Length 654 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAST-242ENST00000515063 TDP1Q9NUW8 608 aa4.45□□□□□ -1.7
CAST-242ENST00000515063 DKK2Q9UBU2 259 aa4.45□□□□□ -1.7
CAST-242ENST00000515063 TSPYL4Q9UJ04 414 aa4.45□□□□□ -1.7
CAST-242ENST00000515063 KCNE5Q9UJ90 142 aa4.45□□□□□ -1.7
CAST-242ENST00000515063 INTUQ9ULD6 942 aa4.45□□□□□ -1.7
CAST-242ENST00000515063 ACTL7AQ9Y615 435 aa4.45□□□□□ -1.7
CAST-242ENST00000515063 NFAT5O94916 1531 aa4.45□□□□□ -1.7
CAST-242ENST00000515063 ABCC6O95255 1503 aa4.45□□□□□ -1.7
CAST-242ENST00000515063 MST1RQ04912 1400 aa4.45□□□□□ -1.7
CAST-242ENST00000515063 AOX1Q06278 1338 aa4.45□□□□□ -1.7
CAST-242ENST00000515063 PNPLA7Q6ZV29 1317 aa4.45□□□□□ -1.7
CAST-242ENST00000515063 CAMTA1Q9Y6Y1 1673 aa4.45□□□□□ -1.7
CAST-242ENST00000515063 CEMIPQ8WUJ3 1361 aa4.44□□□□□ -1.7
CAST-242ENST00000515063 MAP3K5Q99683 1374 aa4.44□□□□□ -1.7
CAST-242ENST00000515063 FSD2A1L4K1 749 aa4.44□□□□□ -1.7
CAST-242ENST00000515063 OVOL3O00110 214 aa4.44□□□□□ -1.7
CAST-242ENST00000515063 XPOTO43592 962 aaKnown RBP4.44□□□□□ -1.7
CAST-242ENST00000515063 SGTAO43765 313 aa4.44□□□□□ -1.7
CAST-242ENST00000515063 NDUFS2O75306 463 aa4.44□□□□□ -1.7
CAST-242ENST00000515063 REC8O95072 547 aa4.44□□□□□ -1.7
CAST-242ENST00000515063 GPANK1O95872 356 aa4.44□□□□□ -1.7
CAST-242ENST00000515063 MT-CO1P00395 513 aa4.44□□□□□ -1.7
CAST-242ENST00000515063 LMNAP02545 664 aaKnown RBP4.44□□□□□ -1.7
CAST-242ENST00000515063 GNAI2P04899 355 aa4.44□□□□□ -1.7
CAST-242ENST00000515063 MYBL2P10244 700 aa4.44□□□□□ -1.7
CAST-242ENST00000515063 MTHFD1P11586 935 aaKnown RBP4.44□□□□□ -1.7
CAST-242ENST00000515063 CKBP12277 381 aa4.44□□□□□ -1.7
CAST-242ENST00000515063 FPR1P21462 350 aa4.44□□□□□ -1.7
CAST-242ENST00000515063 FDXRP22570 491 aa4.44□□□□□ -1.7
CAST-242ENST00000515063 PCSK1P29120 753 aa4.44□□□□□ -1.7
CAST-242ENST00000515063 HOXC9P31274 260 aa4.44□□□□□ -1.7
CAST-242ENST00000515063 IARSP41252 1262 aaKnown RBP4.44□□□□□ -1.7
CAST-242ENST00000515063 SLC6A9P48067 706 aa4.44□□□□□ -1.7
CAST-242ENST00000515063 CDKN1CP49918 316 aaPredicted RBP4.44□□□□□ -1.7
CAST-242ENST00000515063 NUCB2P80303 420 aa4.44□□□□□ -1.7
CAST-242ENST00000515063 ATP8B2P98198 1209 aa4.44□□□□□ -1.7
CAST-242ENST00000515063 CDC42EP1Q00587 391 aa4.44□□□□□ -1.7
CAST-242ENST00000515063 DCTN1Q14203 1278 aa4.44□□□□□ -1.7
CAST-242ENST00000515063 TAF7Q15545 349 aaPredicted RBP4.44□□□□□ -1.7
CAST-242ENST00000515063 DACT2Q5SW24 774 aa4.44□□□□□ -1.7
CAST-242ENST00000515063 MCM10Q7L590 875 aa4.44□□□□□ -1.7
CAST-242ENST00000515063 CMTR2Q8IYT2 770 aaKnown RBP4.44□□□□□ -1.7
CAST-242ENST00000515063 TMEM132CQ8N3T6 1108 aa4.44□□□□□ -1.7
CAST-242ENST00000515063 PPM1NQ8N819 430 aa4.44□□□□□ -1.7
CAST-242ENST00000515063 KCNH5Q8NCM2 988 aa4.44□□□□□ -1.7
CAST-242ENST00000515063 BEND2Q8NDZ0 799 aa4.44□□□□□ -1.7
CAST-242ENST00000515063 NUP133Q8WUM0 1156 aa4.44□□□□□ -1.7
CAST-242ENST00000515063 NRG4Q8WWG1 115 aa4.44□□□□□ -1.7
CAST-242ENST00000515063 IP6K1Q92551 441 aa4.44□□□□□ -1.7
CAST-242ENST00000515063 RNF31Q96EP0 1072 aa4.44□□□□□ -1.7
CAST-242ENST00000515063 BOD1Q96IK1 185 aa4.44□□□□□ -1.7
CAST-242ENST00000515063 FAXDC2Q96IV6 333 aa4.44□□□□□ -1.7
CAST-242ENST00000515063 SLC2A13Q96QE2 648 aa4.44□□□□□ -1.7
CAST-242ENST00000515063 MED15Q96RN5 788 aa4.44□□□□□ -1.7
CAST-242ENST00000515063 PNKPQ96T60 521 aa4.44□□□□□ -1.7
CAST-242ENST00000515063 NEU1Q99519 415 aa4.44□□□□□ -1.7
CAST-242ENST00000515063 TEX101Q9BY14 249 aa4.44□□□□□ -1.7
CAST-242ENST00000515063 ALOXE3Q9BYJ1 711 aa4.44□□□□□ -1.7
CAST-242ENST00000515063 C11orf54Q9H0W9 315 aaPredicted RBP4.44□□□□□ -1.7
CAST-242ENST00000515063 TBCCD1Q9NVR7 557 aa4.44□□□□□ -1.7
CAST-242ENST00000515063 DDX56Q9NY93 547 aaKnown RBP4.44□□□□□ -1.7
CAST-242ENST00000515063 TESQ9UGI8 421 aaKnown RBP4.44□□□□□ -1.7
CAST-242ENST00000515063 TRHDEQ9UKU6 1024 aa4.44□□□□□ -1.7
CAST-242ENST00000515063 RUVBL1Q9Y265 456 aaKnown RBP4.44□□□□□ -1.7
CAST-242ENST00000515063 SIK3Q9Y2K2 1263 aa4.44□□□□□ -1.7
CAST-242ENST00000515063 MTO1Q9Y2Z2 717 aaKnown RBP4.44□□□□□ -1.7
CAST-242ENST00000515063 SLIT3O75094 1523 aa4.44□□□□□ -1.7
CAST-242ENST00000515063 KIF1AQ12756 1690 aa4.44□□□□□ -1.7
CAST-242ENST00000515063 ADAMTS7Q9UKP4 1686 aa4.44□□□□□ -1.7
CAST-242ENST00000515063 SALL3Q9BXA9 1300 aa4.44□□□□□ -1.7
CAST-242ENST00000515063 ADAMTSL3P82987 1691 aa4.43□□□□□ -1.7
CAST-242ENST00000515063 UNC119BA6NIH7 251 aa4.43□□□□□ -1.7
CAST-242ENST00000515063 KIAA0391O15091 583 aaKnown RBP4.43□□□□□ -1.7
CAST-242ENST00000515063 ERN1O75460 977 aaKnown RBP4.43□□□□□ -1.7
CAST-242ENST00000515063 HAUS5O94927 633 aa4.43□□□□□ -1.7
CAST-242ENST00000515063 SPDEFO95238 335 aa4.43□□□□□ -1.7
CAST-242ENST00000515063 HSP90AB1P08238 724 aaKnown RBP4.43□□□□□ -1.7
CAST-242ENST00000515063 ITGAMP11215 1152 aa4.43□□□□□ -1.7
CAST-242ENST00000515063 BMP5P22003 454 aa4.43□□□□□ -1.7
CAST-242ENST00000515063 FGFR4P22455 802 aa4.43□□□□□ -1.7
CAST-242ENST00000515063 CCND1P24385 295 aa4.43□□□□□ -1.7
CAST-242ENST00000515063 PTTG1IPP53801 180 aa4.43□□□□□ -1.7
CAST-242ENST00000515063 CTXN1P60606 82 aa4.43□□□□□ -1.7
CAST-242ENST00000515063 OCA2Q04671 838 aa4.43□□□□□ -1.7
CAST-242ENST00000515063 TP53BP2Q13625 1128 aa4.43□□□□□ -1.7
CAST-242ENST00000515063 RAB39AQ14964 217 aa4.43□□□□□ -1.7
CAST-242ENST00000515063 KRTAP15-1Q3LI76 137 aa4.43□□□□□ -1.7
CAST-242ENST00000515063 AMOTQ4VCS5 1084 aa4.43□□□□□ -1.7
CAST-242ENST00000515063 UBE3BQ7Z3V4 1068 aa4.43□□□□□ -1.7
CAST-242ENST00000515063 PNMA8AQ86V59 439 aaPredicted RBP4.43□□□□□ -1.7
CAST-242ENST00000515063 COLGALT2Q8IYK4 626 aa4.43□□□□□ -1.7
CAST-242ENST00000515063 CBARPQ8N350 705 aaPredicted RBP4.43□□□□□ -1.7
CAST-242ENST00000515063 AOPEPQ8N6M6 819 aa4.43□□□□□ -1.7
CAST-242ENST00000515063 MAN1C1Q9NR34 630 aa4.43□□□□□ -1.7
CAST-242ENST00000515063 NIPSNAP3AQ9UFN0 247 aaPredicted RBP4.43□□□□□ -1.7
CAST-242ENST00000515063 STAP2Q9UGK3 403 aa4.43□□□□□ -1.7
CAST-242ENST00000515063 SLC23A1Q9UHI7 598 aa4.43□□□□□ -1.7
CAST-242ENST00000515063 DMTF1Q9Y222 760 aa4.43□□□□□ -1.7
CAST-242ENST00000515063 MAP3K2Q9Y2U5 619 aa4.43□□□□□ -1.7
CAST-242ENST00000515063 SIPA1L3O60292 1781 aaPredicted RBP4.42□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 75.7 ms