RNA–Protein interactions for RNA: ENST00000514901.5

NUP54-216, Transcript of nucleoporin 54, humanhuman

TSL 3

Gene NUP54, Length 500 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-216ENST00000514901 SAMSN1Q9NSI8 373 aaKnown RBP15.23■□□□□ 0.03
NUP54-216ENST00000514901 GTF3C4Q9UKN8 822 aa15.23■□□□□ 0.03
NUP54-216ENST00000514901 INSL5Q9Y5Q6 135 aa15.23■□□□□ 0.03
NUP54-216ENST00000514901 SYCE3A1L190 88 aa15.22■□□□□ 0.03
NUP54-216ENST00000514901 SMTNL1A8MU46 457 aa15.22■□□□□ 0.03
NUP54-216ENST00000514901 CCL16O15467 120 aa15.22■□□□□ 0.03
NUP54-216ENST00000514901 VNN2O95498 520 aa15.22■□□□□ 0.03
NUP54-216ENST00000514901 TPM2P07951 284 aa15.22■□□□□ 0.03
NUP54-216ENST00000514901 WEE2P0C1S8 567 aa15.22■□□□□ 0.03
NUP54-216ENST00000514901 EPHB3P54753 998 aa15.22■□□□□ 0.03
NUP54-216ENST00000514901 YWHAEP62258 255 aaKnown RBP15.22■□□□□ 0.03
NUP54-216ENST00000514901 INCA1Q0VD86 236 aa15.22■□□□□ 0.03
NUP54-216ENST00000514901 CFAP221Q4G0U5 840 aa15.22■□□□□ 0.03
NUP54-216ENST00000514901 TCP11X2Q5H9J9 407 aa15.22■□□□□ 0.03
NUP54-216ENST00000514901 SPATA2LQ8IUW3 424 aaPredicted RBP15.22■□□□□ 0.03
NUP54-216ENST00000514901 CRYBG2Q8N1P7 616 aa15.22■□□□□ 0.03
NUP54-216ENST00000514901 ANKRD20A12PQ8NF67 263 aa15.22■□□□□ 0.03
NUP54-216ENST00000514901 TATDN2Q93075 761 aa15.22■□□□□ 0.03
NUP54-216ENST00000514901 FAM81BQ96LP2 452 aa15.22■□□□□ 0.03
NUP54-216ENST00000514901 ZNF512Q96ME7 567 aaPredicted RBP15.22■□□□□ 0.03
NUP54-216ENST00000514901 NT5C1BQ96P26 610 aa15.22■□□□□ 0.03
NUP54-216ENST00000514901 FUCA2Q9BTY2 467 aa15.22■□□□□ 0.03
NUP54-216ENST00000514901 PHF7Q9BWX1 381 aaPredicted RBP15.22■□□□□ 0.03
NUP54-216ENST00000514901 SDCBP2Q9H190 292 aa15.22■□□□□ 0.03
NUP54-216ENST00000514901 WDR6Q9NNW5 1121 aaKnown RBP15.22■□□□□ 0.03
NUP54-216ENST00000514901 UTP3Q9NQZ2 479 aaKnown RBP eCLIP15.22■□□□□ 0.03
NUP54-216ENST00000514901 ASB3Q9Y575 518 aa15.22■□□□□ 0.03
NUP54-216ENST00000514901 MYBPHLA2RUH7 354 aa15.21■□□□□ 0.03
NUP54-216ENST00000514901 LRRN2O75325 713 aa15.21■□□□□ 0.03
NUP54-216ENST00000514901 HAPLN1P10915 354 aaPredicted RBP15.21■□□□□ 0.03
NUP54-216ENST00000514901 IL9P15248 144 aa15.21■□□□□ 0.03
NUP54-216ENST00000514901 PTPN2P17706 415 aa15.21■□□□□ 0.03
NUP54-216ENST00000514901 RAP1GAPP47736 663 aa15.21■□□□□ 0.03
NUP54-216ENST00000514901 TWF1Q12792 350 aa15.21■□□□□ 0.03
NUP54-216ENST00000514901 ZSCAN23Q3MJ62 389 aa15.21■□□□□ 0.03
NUP54-216ENST00000514901 MGAT5BQ3V5L5 792 aa15.21■□□□□ 0.03
NUP54-216ENST00000514901 VWA3BQ502W6 1294 aa15.21■□□□□ 0.03
NUP54-216ENST00000514901 CDKAL1Q5VV42 579 aa15.21■□□□□ 0.03
NUP54-216ENST00000514901 IQCEQ6IPM2 695 aa15.21■□□□□ 0.03
NUP54-216ENST00000514901 GBP6Q6ZN66 633 aa15.21■□□□□ 0.03
NUP54-216ENST00000514901 B3GALNT2Q8NCR0 500 aa15.21■□□□□ 0.03
NUP54-216ENST00000514901 LMO3Q8TAP4 145 aa15.21■□□□□ 0.03
NUP54-216ENST00000514901 ELMO3Q96BJ8 720 aa15.21■□□□□ 0.03
NUP54-216ENST00000514901 NT5C1AQ9BXI3 368 aa15.21■□□□□ 0.03
NUP54-216ENST00000514901 NDST4Q9H3R1 872 aa15.21■□□□□ 0.03
NUP54-216ENST00000514901 CRTAC1Q9NQ79 661 aa15.21■□□□□ 0.03
NUP54-216ENST00000514901 TMLHEQ9NVH6 421 aa15.21■□□□□ 0.03
NUP54-216ENST00000514901 FANCLQ9NW38 375 aa15.21■□□□□ 0.03
NUP54-216ENST00000514901 ABI2Q9NYB9 513 aaPredicted RBP15.21■□□□□ 0.03
NUP54-216ENST00000514901 SLC27A5Q9Y2P5 690 aa15.21■□□□□ 0.03
NUP54-216ENST00000514901 YIPF1Q9Y548 306 aa15.21■□□□□ 0.03
NUP54-216ENST00000514901 TTC28Q96AY4 2481 aa15.2■□□□□ 0.02
NUP54-216ENST00000514901 HCRTO43612 131 aa15.2■□□□□ 0.02
NUP54-216ENST00000514901 ATP2C2O75185 946 aa15.2■□□□□ 0.02
NUP54-216ENST00000514901 CDK11BP21127 795 aaKnown RBP15.2■□□□□ 0.02
NUP54-216ENST00000514901 MAGEA11P43364 429 aa15.2■□□□□ 0.02
NUP54-216ENST00000514901 ZNF165P49910 485 aa15.2■□□□□ 0.02
NUP54-216ENST00000514901 NDST1P52848 882 aa15.2■□□□□ 0.02
NUP54-216ENST00000514901 PSMC1P62191 440 aaKnown RBP15.2■□□□□ 0.02
NUP54-216ENST00000514901 RPL10AP62906 217 aaKnown RBP15.2■□□□□ 0.02
NUP54-216ENST00000514901 CUL2Q13617 745 aa15.2■□□□□ 0.02
NUP54-216ENST00000514901 VEPH1Q14D04 833 aa15.2■□□□□ 0.02
NUP54-216ENST00000514901 SMYD5Q6GMV2 418 aa15.2■□□□□ 0.02
NUP54-216ENST00000514901 VSTM1Q6UX27 236 aa15.2■□□□□ 0.02
NUP54-216ENST00000514901 ITIH5Q86UX2 942 aa15.2■□□□□ 0.02
NUP54-216ENST00000514901 ADHFE1Q8IWW8 467 aa15.2■□□□□ 0.02
NUP54-216ENST00000514901 LEMD2Q8NC56 503 aa15.2■□□□□ 0.02
NUP54-216ENST00000514901 CEP295NLQ96MC4 621 aa15.2■□□□□ 0.02
NUP54-216ENST00000514901 SEPT5Q99719 369 aaPredicted RBP15.2■□□□□ 0.02
NUP54-216ENST00000514901 CRISPLD1Q9H336 500 aa15.2■□□□□ 0.02
NUP54-216ENST00000514901 AVENQ9NQS1 362 aaPredicted RBP15.2■□□□□ 0.02
NUP54-216ENST00000514901 USTQ9Y2C2 406 aa15.2■□□□□ 0.02
NUP54-216ENST00000514901 NR2E1Q9Y466 385 aa15.2■□□□□ 0.02
NUP54-216ENST00000514901 ATP8B3O60423 1300 aa15.19■□□□□ 0.02
NUP54-216ENST00000514901 TCF20Q9UGU0 1960 aaKnown RBP15.19■□□□□ 0.02
NUP54-216ENST00000514901 ZNF197O14709 1029 aa15.19■□□□□ 0.02
NUP54-216ENST00000514901 CILPO75339 1184 aa15.19■□□□□ 0.02
NUP54-216ENST00000514901 CYP27A1Q02318 531 aa15.19■□□□□ 0.02
NUP54-216ENST00000514901 GCNT1Q02742 428 aa15.19■□□□□ 0.02
NUP54-216ENST00000514901 NCAPHQ15003 741 aa15.19■□□□□ 0.02
NUP54-216ENST00000514901 EXOC3L4Q17RC7 722 aa15.19■□□□□ 0.02
NUP54-216ENST00000514901 HSP90AA4PQ58FG1 418 aa15.19■□□□□ 0.02
NUP54-216ENST00000514901 MDH1BQ5I0G3 518 aa15.19■□□□□ 0.02
NUP54-216ENST00000514901 CYP4A22Q5TCH4 519 aa15.19■□□□□ 0.02
NUP54-216ENST00000514901 ENOSF1Q7L5Y1 443 aa15.19■□□□□ 0.02
NUP54-216ENST00000514901 OTOP3Q7RTS5 596 aa15.19■□□□□ 0.02
NUP54-216ENST00000514901 GRASPQ7Z6J2 395 aaPredicted RBP15.19■□□□□ 0.02
NUP54-216ENST00000514901 MYLPFQ96A32 169 aa15.19■□□□□ 0.02
NUP54-216ENST00000514901 JAKMIP2Q96AA8 810 aa15.19■□□□□ 0.02
NUP54-216ENST00000514901 PCED1BQ96HM7 432 aa15.19■□□□□ 0.02
NUP54-216ENST00000514901 ELOVL4Q9GZR5 314 aa15.19■□□□□ 0.02
NUP54-216ENST00000514901 INTS2Q9H0H0 1204 aaKnown RBP15.19■□□□□ 0.02
NUP54-216ENST00000514901 DPEP3Q9H4B8 488 aa15.19■□□□□ 0.02
NUP54-216ENST00000514901 POMKQ9H5K3 350 aa15.19■□□□□ 0.02
NUP54-216ENST00000514901 CISHQ9NSE2 258 aa15.19■□□□□ 0.02
NUP54-216ENST00000514901 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP15.19■□□□□ 0.02
NUP54-216ENST00000514901 GCNT4Q9P109 453 aa15.19■□□□□ 0.02
NUP54-216ENST00000514901 NME7Q9Y5B8 376 aa15.19■□□□□ 0.02
NUP54-216ENST00000514901 CLUHO75153 1309 aa15.18■□□□□ 0.02
NUP54-216ENST00000514901 DOCK6Q96HP0 2047 aa15.18■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms