RNA–Protein interactions for RNA: ENST00000514610.1

HMGCS1-207, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

TSL 2

Gene HMGCS1, Length 555 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-207ENST00000514610 ZNF280BQ86YH2 543 aa6.27□□□□□ -1.41
HMGCS1-207ENST00000514610 KIAA1191Q96A73 305 aa6.27□□□□□ -1.41
HMGCS1-207ENST00000514610 MYEOVQ96EZ4 313 aa6.27□□□□□ -1.41
HMGCS1-207ENST00000514610 UNKLQ9H9P5 680 aaKnown RBP6.27□□□□□ -1.41
HMGCS1-207ENST00000514610 AS3MTQ9HBK9 375 aa6.27□□□□□ -1.41
HMGCS1-207ENST00000514610 TMEM74BQ9NUR3 256 aa6.27□□□□□ -1.41
HMGCS1-207ENST00000514610 PAXBP1Q9Y5B6 917 aa6.27□□□□□ -1.41
HMGCS1-207ENST00000514610 CENPVL1A0A0U1RR11 272 aa6.26□□□□□ -1.41
HMGCS1-207ENST00000514610 CDKL5O76039 1030 aa6.26□□□□□ -1.41
HMGCS1-207ENST00000514610 SPDEFO95238 335 aa6.26□□□□□ -1.41
HMGCS1-207ENST00000514610 ATXN1LP0C7T5 689 aaKnown RBP6.26□□□□□ -1.41
HMGCS1-207ENST00000514610 TXNP10599 105 aaKnown RBP6.26□□□□□ -1.41
HMGCS1-207ENST00000514610 GATA3P23771 443 aa6.26□□□□□ -1.41
HMGCS1-207ENST00000514610 CARSP49589 748 aaKnown RBP6.26□□□□□ -1.41
HMGCS1-207ENST00000514610 VAV2P52735 878 aa6.26□□□□□ -1.41
HMGCS1-207ENST00000514610 TP53BP2Q13625 1128 aa6.26□□□□□ -1.41
HMGCS1-207ENST00000514610 FNDC7Q5VTL7 733 aa6.26□□□□□ -1.41
HMGCS1-207ENST00000514610 TMEM108Q6UXF1 575 aa6.26□□□□□ -1.41
HMGCS1-207ENST00000514610 RHOUQ7L0Q8 258 aa6.26□□□□□ -1.41
HMGCS1-207ENST00000514610 ATP11CQ8NB49 1132 aa6.26□□□□□ -1.41
HMGCS1-207ENST00000514610 DEPTORQ8TB45 409 aa6.26□□□□□ -1.41
HMGCS1-207ENST00000514610 SPSB4Q96A44 273 aa6.26□□□□□ -1.41
HMGCS1-207ENST00000514610 ZC3H10Q96K80 434 aaKnown RBP6.26□□□□□ -1.41
HMGCS1-207ENST00000514610 COLEC11Q9BWP8 271 aa6.26□□□□□ -1.41
HMGCS1-207ENST00000514610 GALNT9Q9HCQ5 603 aa6.26□□□□□ -1.41
HMGCS1-207ENST00000514610 SLC2A4RGQ9NR83 387 aa6.26□□□□□ -1.41
HMGCS1-207ENST00000514610 DMTF1Q9Y222 760 aa6.26□□□□□ -1.41
HMGCS1-207ENST00000514610 NEU2Q9Y3R4 380 aa6.26□□□□□ -1.41
HMGCS1-207ENST00000514610 NOX1Q9Y5S8 564 aa6.26□□□□□ -1.41
HMGCS1-207ENST00000514610 MYADML2A6NDP7 307 aa6.25□□□□□ -1.41
HMGCS1-207ENST00000514610 APOL1O14791 398 aa6.25□□□□□ -1.41
HMGCS1-207ENST00000514610 LDHAP00338 332 aaKnown RBP6.25□□□□□ -1.41
HMGCS1-207ENST00000514610 HLA-DOAP06340 250 aa6.25□□□□□ -1.41
HMGCS1-207ENST00000514610 ANXA2P07355 339 aaKnown RBP6.25□□□□□ -1.41
HMGCS1-207ENST00000514610 HARSP12081 509 aaKnown RBP6.25□□□□□ -1.41
HMGCS1-207ENST00000514610 LAG3P18627 525 aa6.25□□□□□ -1.41
HMGCS1-207ENST00000514610 FGFR2P21802 821 aa6.25□□□□□ -1.41
HMGCS1-207ENST00000514610 NPTX2P47972 431 aa6.25□□□□□ -1.41
HMGCS1-207ENST00000514610 NDUFV1P49821 464 aa6.25□□□□□ -1.41
HMGCS1-207ENST00000514610 RPS7P62081 194 aaKnown RBP6.25□□□□□ -1.41
HMGCS1-207ENST00000514610 FPGSQ05932 587 aa6.25□□□□□ -1.41
HMGCS1-207ENST00000514610 FOXE3Q13461 319 aa6.25□□□□□ -1.41
HMGCS1-207ENST00000514610 MORC3Q14149 939 aa6.25□□□□□ -1.41
HMGCS1-207ENST00000514610 SPDYE7PQ495Y7 208 aa6.25□□□□□ -1.41
HMGCS1-207ENST00000514610 PLA1AQ53H76 456 aa6.25□□□□□ -1.41
HMGCS1-207ENST00000514610 MIIPQ5JXC2 388 aa6.25□□□□□ -1.41
HMGCS1-207ENST00000514610 IZUMO3Q5VZ72 239 aa6.25□□□□□ -1.41
HMGCS1-207ENST00000514610 FAM9AQ8IZU1 332 aaPredicted RBP6.25□□□□□ -1.41
HMGCS1-207ENST00000514610 FUBP1Q96AE4 644 aaKnown RBP6.25□□□□□ -1.41
HMGCS1-207ENST00000514610 LENG9Q96B70 501 aa6.25□□□□□ -1.41
HMGCS1-207ENST00000514610 NRDE2Q9H7Z3 1164 aa6.25□□□□□ -1.41
HMGCS1-207ENST00000514610 CERS4Q9HA82 394 aa6.25□□□□□ -1.41
HMGCS1-207ENST00000514610 MYO1AQ9UBC5 1043 aa6.25□□□□□ -1.41
HMGCS1-207ENST00000514610 RGS17Q9UGC6 210 aaPredicted RBP6.25□□□□□ -1.41
HMGCS1-207ENST00000514610 MID2Q9UJV3 735 aa6.25□□□□□ -1.41
HMGCS1-207ENST00000514610 ITGB1BP2Q9UKP3 347 aa6.25□□□□□ -1.41
HMGCS1-207ENST00000514610 PADI4Q9UM07 663 aa6.25□□□□□ -1.41
HMGCS1-207ENST00000514610 FZD1Q9UP38 647 aa6.25□□□□□ -1.41
HMGCS1-207ENST00000514610 HS3ST4Q9Y661 456 aa6.25□□□□□ -1.41
HMGCS1-207ENST00000514610 hCG_1984214I3L0E3 225 aa6.24□□□□□ -1.41
HMGCS1-207ENST00000514610 RASSF9O75901 435 aa6.24□□□□□ -1.41
HMGCS1-207ENST00000514610 FGF18O76093 207 aa6.24□□□□□ -1.41
HMGCS1-207ENST00000514610 PEX11BO96011 259 aa6.24□□□□□ -1.41
HMGCS1-207ENST00000514610 CYP2C9P11712 490 aa6.24□□□□□ -1.41
HMGCS1-207ENST00000514610 ITGALP20701 1170 aa6.24□□□□□ -1.41
HMGCS1-207ENST00000514610 ABCB4P21439 1286 aa6.24□□□□□ -1.41
HMGCS1-207ENST00000514610 LOXL3P58215 753 aa6.24□□□□□ -1.41
HMGCS1-207ENST00000514610 HLXQ14774 488 aaPredicted RBP6.24□□□□□ -1.41
HMGCS1-207ENST00000514610 PREPLQ4J6C6 727 aaPredicted RBP6.24□□□□□ -1.41
HMGCS1-207ENST00000514610 TIGD2Q4W5G0 525 aa6.24□□□□□ -1.41
HMGCS1-207ENST00000514610 C10orf62Q5T681 223 aaPredicted RBP6.24□□□□□ -1.41
HMGCS1-207ENST00000514610 VPS53Q5VIR6 699 aa6.24□□□□□ -1.41
HMGCS1-207ENST00000514610 SP5Q6BEB4 398 aaPredicted RBP6.24□□□□□ -1.41
HMGCS1-207ENST00000514610 MICALCLQ6ZW33 695 aa6.24□□□□□ -1.41
HMGCS1-207ENST00000514610 GPR149Q86SP6 731 aa6.24□□□□□ -1.41
HMGCS1-207ENST00000514610 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP6.24□□□□□ -1.41
HMGCS1-207ENST00000514610 SNX19Q92543 992 aa6.24□□□□□ -1.41
HMGCS1-207ENST00000514610 IQCDQ96DY2 449 aa6.24□□□□□ -1.41
HMGCS1-207ENST00000514610 MOGAT1Q96PD6 335 aa6.24□□□□□ -1.41
HMGCS1-207ENST00000514610 MLST8Q9BVC4 326 aa6.24□□□□□ -1.41
HMGCS1-207ENST00000514610 ANKFY1Q9P2R3 1169 aa6.24□□□□□ -1.41
HMGCS1-207ENST00000514610 SHOC2Q9UQ13 582 aa6.24□□□□□ -1.41
HMGCS1-207ENST00000514610 MRPS17Q9Y2R5 130 aaKnown RBP6.24□□□□□ -1.41
HMGCS1-207ENST00000514610 PCDHGB2Q9Y5G2 931 aa6.24□□□□□ -1.41
HMGCS1-207ENST00000514610 COMMD10Q9Y6G5 202 aa6.24□□□□□ -1.41
HMGCS1-207ENST00000514610 SPATA31A3Q5VYP0 1347 aa6.24□□□□□ -1.41
HMGCS1-207ENST00000514610 ABHD14A-ACY1A0A1B0GW23 586 aa6.23□□□□□ -1.41
HMGCS1-207ENST00000514610 H7C4K7 107 aa6.23□□□□□ -1.41
HMGCS1-207ENST00000514610 SOAT2O75908 522 aa6.23□□□□□ -1.41
HMGCS1-207ENST00000514610 XRCC6P12956 609 aaKnown RBP eCLIP6.23□□□□□ -1.41
HMGCS1-207ENST00000514610 PXNP49023 591 aaPredicted RBP6.23□□□□□ -1.41
HMGCS1-207ENST00000514610 TUBA3CQ13748 450 aa6.23□□□□□ -1.41
HMGCS1-207ENST00000514610 SLC35G1Q2M3R5 365 aa6.23□□□□□ -1.41
HMGCS1-207ENST00000514610 DGKKQ5KSL6 1271 aa6.23□□□□□ -1.41
HMGCS1-207ENST00000514610 RBM20Q5T481 1227 aaKnown RBP6.23□□□□□ -1.41
HMGCS1-207ENST00000514610 RRAGBQ5VZM2 374 aa6.23□□□□□ -1.41
HMGCS1-207ENST00000514610 FCRL6Q6DN72 434 aa6.23□□□□□ -1.41
HMGCS1-207ENST00000514610 ARMC6Q6NXE6 501 aa6.23□□□□□ -1.41
HMGCS1-207ENST00000514610 TUBA3EQ6PEY2 450 aa6.23□□□□□ -1.41
HMGCS1-207ENST00000514610 KCTD20Q7Z5Y7 419 aa6.23□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms