RNA–Protein interactions for RNA: ENST00000514110.5

SNHG4-208, Transcript of small nucleolar RNA host gene 4, humanhuman

TSL 1 (best)

Gene SNHG4, Length 679 nt, Biotype retained intron, Subcellular localisation Nucleoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG4-208ENST00000514110 SDHAF4Q5VUM1 108 aa13.14□□□□□ -0.31
SNHG4-208ENST00000514110 C1orf228Q6PIY5 440 aa13.14□□□□□ -0.31
SNHG4-208ENST00000514110 OSTM1Q86WC4 334 aa13.14□□□□□ -0.31
SNHG4-208ENST00000514110 SPEM1Q8N4L4 309 aa13.14□□□□□ -0.31
SNHG4-208ENST00000514110 CSGALNACT2Q8N6G5 542 aa13.14□□□□□ -0.31
SNHG4-208ENST00000514110 CELF5Q8N6W0 485 aaKnown RBP13.14□□□□□ -0.31
SNHG4-208ENST00000514110 PDILTQ8N807 584 aa13.14□□□□□ -0.31
SNHG4-208ENST00000514110 MAB21L3Q8N8X9 362 aa13.14□□□□□ -0.31
SNHG4-208ENST00000514110 NOC3LQ8WTT2 800 aaKnown RBP13.14□□□□□ -0.31
SNHG4-208ENST00000514110 CACTINQ8WUQ7 758 aaKnown RBP13.14□□□□□ -0.31
SNHG4-208ENST00000514110 SECISBP2LQ93073 1101 aaKnown RBP13.14□□□□□ -0.31
SNHG4-208ENST00000514110 GCNAQ96QF7 691 aa13.14□□□□□ -0.31
SNHG4-208ENST00000514110 PDE11AQ9HCR9 933 aa13.14□□□□□ -0.31
SNHG4-208ENST00000514110 DDX43Q9NXZ2 648 aaKnown RBP13.14□□□□□ -0.31
SNHG4-208ENST00000514110 SIX4Q9UIU6 781 aa13.14□□□□□ -0.31
SNHG4-208ENST00000514110 CCL26Q9Y258 94 aa13.14□□□□□ -0.31
SNHG4-208ENST00000514110 CACNA1AO00555 2505 aa13.13□□□□□ -0.31
SNHG4-208ENST00000514110 CHURC1-FNTBB4DL54 471 aa13.13□□□□□ -0.31
SNHG4-208ENST00000514110 K7ESF4 209 aa13.13□□□□□ -0.31
SNHG4-208ENST00000514110 HCRTO43612 131 aa13.13□□□□□ -0.31
SNHG4-208ENST00000514110 HUS1O60921 280 aa13.13□□□□□ -0.31
SNHG4-208ENST00000514110 ACAT1P24752 427 aaKnown RBP13.13□□□□□ -0.31
SNHG4-208ENST00000514110 FNTBP49356 437 aa13.13□□□□□ -0.31
SNHG4-208ENST00000514110 PLCB2Q00722 1185 aa13.13□□□□□ -0.31
SNHG4-208ENST00000514110 CCINQ13939 588 aa13.13□□□□□ -0.31
SNHG4-208ENST00000514110 NFE2Q16621 373 aaPredicted RBP13.13□□□□□ -0.31
SNHG4-208ENST00000514110 INTS6LQ5JSJ4 861 aaKnown RBP13.13□□□□□ -0.31
SNHG4-208ENST00000514110 DGKKQ5KSL6 1271 aa13.13□□□□□ -0.31
SNHG4-208ENST00000514110 LMBRD2Q68DH5 695 aaPredicted RBP13.13□□□□□ -0.31
SNHG4-208ENST00000514110 TXNDC8Q6A555 127 aa13.13□□□□□ -0.31
SNHG4-208ENST00000514110 LRRC52Q8N7C0 313 aa13.13□□□□□ -0.31
SNHG4-208ENST00000514110 GLIS3Q8NEA6 775 aa13.13□□□□□ -0.31
SNHG4-208ENST00000514110 LEO1Q8WVC0 666 aaPredicted RBP13.13□□□□□ -0.31
SNHG4-208ENST00000514110 USP13Q92995 863 aaPredicted RBP13.13□□□□□ -0.31
SNHG4-208ENST00000514110 HPS3Q969F9 1004 aa13.13□□□□□ -0.31
SNHG4-208ENST00000514110 INTS4Q96HW7 963 aaKnown RBP13.13□□□□□ -0.31
SNHG4-208ENST00000514110 PKMYT1Q99640 499 aa13.13□□□□□ -0.31
SNHG4-208ENST00000514110 ACBD6Q9BR61 282 aa13.13□□□□□ -0.31
SNHG4-208ENST00000514110 MTMR12Q9C0I1 747 aa13.13□□□□□ -0.31
SNHG4-208ENST00000514110 PARD6AQ9NPB6 346 aa13.13□□□□□ -0.31
SNHG4-208ENST00000514110 GKN1Q9NS71 199 aa13.13□□□□□ -0.31
SNHG4-208ENST00000514110 GDAP2Q9NXN4 497 aa13.13□□□□□ -0.31
SNHG4-208ENST00000514110 ITGA11Q9UKX5 1188 aa13.13□□□□□ -0.31
SNHG4-208ENST00000514110 MAGED2Q9UNF1 606 aaPredicted RBP13.13□□□□□ -0.31
SNHG4-208ENST00000514110 DENND4CQ5VZ89 1909 aa13.13□□□□□ -0.31
SNHG4-208ENST00000514110 OBSL1O75147 1896 aa13.12□□□□□ -0.31
SNHG4-208ENST00000514110 OTOL1A6NHN0 477 aaPredicted RBP13.12□□□□□ -0.31
SNHG4-208ENST00000514110 HRO43593 1189 aa13.12□□□□□ -0.31
SNHG4-208ENST00000514110 STX6O43752 255 aa13.12□□□□□ -0.31
SNHG4-208ENST00000514110 TADA3O75528 432 aa13.12□□□□□ -0.31
SNHG4-208ENST00000514110 PAPSS2O95340 614 aaPredicted RBP13.12□□□□□ -0.31
SNHG4-208ENST00000514110 KRT19P08727 400 aa13.12□□□□□ -0.31
SNHG4-208ENST00000514110 CYP2F1P24903 491 aa13.12□□□□□ -0.31
SNHG4-208ENST00000514110 HOXD13P35453 343 aa13.12□□□□□ -0.31
SNHG4-208ENST00000514110 NASPP49321 788 aaPredicted RBP13.12□□□□□ -0.31
SNHG4-208ENST00000514110 SRSF5Q13243 272 aaKnown RBP13.12□□□□□ -0.31
SNHG4-208ENST00000514110 DDR2Q16832 855 aa13.12□□□□□ -0.31
SNHG4-208ENST00000514110 ITPRIPL2Q3MIP1 535 aa13.12□□□□□ -0.31
SNHG4-208ENST00000514110 HEATR6Q6AI08 1181 aaKnown RBP13.12□□□□□ -0.31
SNHG4-208ENST00000514110 TRIM68Q6AZZ1 485 aa13.12□□□□□ -0.31
SNHG4-208ENST00000514110 PRR23BQ6ZRT6 265 aa13.12□□□□□ -0.31
SNHG4-208ENST00000514110 TMEM86AQ8N2M4 240 aa13.12□□□□□ -0.31
SNHG4-208ENST00000514110 GPD1LQ8N335 351 aa13.12□□□□□ -0.31
SNHG4-208ENST00000514110 GPR161Q8N6U8 529 aaKnown RBP13.12□□□□□ -0.31
SNHG4-208ENST00000514110 RIN3Q8TB24 985 aa13.12□□□□□ -0.31
SNHG4-208ENST00000514110 CHFRQ96EP1 664 aa13.12□□□□□ -0.31
SNHG4-208ENST00000514110 FAM83CQ9BQN1 747 aa13.12□□□□□ -0.31
SNHG4-208ENST00000514110 ZSCAN16Q9H4T2 348 aaPredicted RBP13.12□□□□□ -0.31
SNHG4-208ENST00000514110 TMEM206Q9H813 350 aa13.12□□□□□ -0.31
SNHG4-208ENST00000514110 HPS4Q9NQG7 708 aa13.12□□□□□ -0.31
SNHG4-208ENST00000514110 THG1LQ9NWX6 298 aaKnown RBP13.12□□□□□ -0.31
SNHG4-208ENST00000514110 ZMYM5Q9UJ78 669 aa13.12□□□□□ -0.31
SNHG4-208ENST00000514110 GMEB2Q9UKD1 530 aa13.12□□□□□ -0.31
SNHG4-208ENST00000514110 GTF3C4Q9UKN8 822 aa13.12□□□□□ -0.31
SNHG4-208ENST00000514110 SNX9Q9Y5X1 595 aa13.12□□□□□ -0.31
SNHG4-208ENST00000514110 PTPRJQ12913 1337 aa13.12□□□□□ -0.31
SNHG4-208ENST00000514110 GABRDO14764 452 aa13.11□□□□□ -0.31
SNHG4-208ENST00000514110 TMEM191BP0C7N4 346 aa13.11□□□□□ -0.31
SNHG4-208ENST00000514110 CSH1P0DML2 217 aa13.11□□□□□ -0.31
SNHG4-208ENST00000514110 CSH2P0DML3 217 aa13.11□□□□□ -0.31
SNHG4-208ENST00000514110 DDX6P26196 483 aaKnown RBP eCLIP13.11□□□□□ -0.31
SNHG4-208ENST00000514110 AVPR1AP37288 418 aa13.11□□□□□ -0.31
SNHG4-208ENST00000514110 RBP5P82980 135 aa13.11□□□□□ -0.31
SNHG4-208ENST00000514110 MYL7Q01449 175 aa13.11□□□□□ -0.31
SNHG4-208ENST00000514110 RUNX3Q13761 415 aa13.11□□□□□ -0.31
SNHG4-208ENST00000514110 STK38Q15208 465 aa13.11□□□□□ -0.31
SNHG4-208ENST00000514110 E2F4Q16254 413 aa13.11□□□□□ -0.31
SNHG4-208ENST00000514110 SOWAHAQ2M3V2 549 aa13.11□□□□□ -0.31
SNHG4-208ENST00000514110 LAIR1Q6GTX8 287 aa13.11□□□□□ -0.31
SNHG4-208ENST00000514110 MON1AQ86VX9 555 aa13.11□□□□□ -0.31
SNHG4-208ENST00000514110 CBWD2Q8IUF1 395 aa13.11□□□□□ -0.31
SNHG4-208ENST00000514110 CCDC65Q8IXS2 484 aa13.11□□□□□ -0.31
SNHG4-208ENST00000514110 ADGRF2Q8IZF7 708 aa13.11□□□□□ -0.31
SNHG4-208ENST00000514110 TOP6BLQ8N6T0 577 aa13.11□□□□□ -0.31
SNHG4-208ENST00000514110 LINC00301Q8NCQ3 95 aa13.11□□□□□ -0.31
SNHG4-208ENST00000514110 OR5B17Q8NGF7 314 aa13.11□□□□□ -0.31
SNHG4-208ENST00000514110 EBF3Q9H4W6 596 aa13.11□□□□□ -0.31
SNHG4-208ENST00000514110 ABCB6Q9NP58 842 aa13.11□□□□□ -0.31
SNHG4-208ENST00000514110 TDP1Q9NUW8 608 aa13.11□□□□□ -0.31
SNHG4-208ENST00000514110 INTS13Q9NVM9 706 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms