RNA–Protein interactions for RNA: ENST00000513960.5

VCAN-210, Transcript of versican, humanhuman

TSL 1 (best)

Gene VCAN, Length 3,973 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-210ENST00000513960 STK10O94804 968 aaKnown RBP10.14□□□□□ -0.79
VCAN-210ENST00000513960 MT-ND3P03897 115 aa10.14□□□□□ -0.79
VCAN-210ENST00000513960 GSTA2P09210 222 aa10.14□□□□□ -0.79
VCAN-210ENST00000513960 NSFP46459 744 aaKnown RBP10.14□□□□□ -0.79
VCAN-210ENST00000513960 ALDH18A1P54886 795 aaKnown RBP10.14□□□□□ -0.79
VCAN-210ENST00000513960 SP4Q02446 784 aa10.14□□□□□ -0.79
VCAN-210ENST00000513960 BTKQ06187 659 aa10.14□□□□□ -0.79
VCAN-210ENST00000513960 CLNKQ7Z7G1 428 aa10.14□□□□□ -0.79
VCAN-210ENST00000513960 ZSWIM2Q8NEG5 633 aa10.14□□□□□ -0.79
VCAN-210ENST00000513960 PYROXD1Q8WU10 500 aa10.14□□□□□ -0.79
VCAN-210ENST00000513960 WDR60Q8WVS4 1066 aa10.14□□□□□ -0.79
VCAN-210ENST00000513960 OPTNQ96CV9 577 aa10.14□□□□□ -0.79
VCAN-210ENST00000513960 RBM41Q96IZ5 413 aaKnown RBP10.14□□□□□ -0.79
VCAN-210ENST00000513960 ZNF184Q99676 751 aaPredicted RBP10.14□□□□□ -0.79
VCAN-210ENST00000513960 PI4K2AQ9BTU6 479 aa10.14□□□□□ -0.79
VCAN-210ENST00000513960 TMEM120AQ9BXJ8 343 aa10.14□□□□□ -0.79
VCAN-210ENST00000513960 UBE2OQ9C0C9 1292 aaKnown RBP10.14□□□□□ -0.79
VCAN-210ENST00000513960 RPAP3Q9H6T3 665 aaPredicted RBP10.14□□□□□ -0.79
VCAN-210ENST00000513960 PCDHA3Q9Y5H8 950 aa10.14□□□□□ -0.79
VCAN-210ENST00000513960 PCDHA10Q9Y5I2 948 aa10.14□□□□□ -0.79
VCAN-210ENST00000513960 DKC1O60832 514 aaKnown RBP eCLIP10.13□□□□□ -0.79
VCAN-210ENST00000513960 CCNFP41002 786 aa10.13□□□□□ -0.79
VCAN-210ENST00000513960 LMBRD2Q68DH5 695 aaPredicted RBP10.13□□□□□ -0.79
VCAN-210ENST00000513960 TTC7BQ86TV6 843 aa10.13□□□□□ -0.79
VCAN-210ENST00000513960 SPATA24Q86W54 205 aa10.13□□□□□ -0.79
VCAN-210ENST00000513960 OLIG1Q8TAK6 271 aa10.13□□□□□ -0.79
VCAN-210ENST00000513960 CCDC110Q8TBZ0 833 aa10.13□□□□□ -0.79
VCAN-210ENST00000513960 SLC26A7Q8TE54 656 aa10.13□□□□□ -0.79
VCAN-210ENST00000513960 KIFC3Q9BVG8 833 aa10.13□□□□□ -0.79
VCAN-210ENST00000513960 DCLK3Q9C098 648 aa10.13□□□□□ -0.79
VCAN-210ENST00000513960 VPS33BQ9H267 617 aa10.13□□□□□ -0.79
VCAN-210ENST00000513960 C10orf88Q9H8K7 445 aa10.13□□□□□ -0.79
VCAN-210ENST00000513960 PXMP2Q9NR77 195 aa10.13□□□□□ -0.79
VCAN-210ENST00000513960 PDP2Q9P2J9 529 aa10.13□□□□□ -0.79
VCAN-210ENST00000513960 SMG5Q9UPR3 1016 aaKnown RBP10.13□□□□□ -0.79
VCAN-210ENST00000513960 AGTPBP1Q9UPW5 1226 aa10.13□□□□□ -0.79
VCAN-210ENST00000513960 MEI4A8MW99 385 aa10.13□□□□□ -0.79
VCAN-210ENST00000513960 KRT1P04264 644 aa10.13□□□□□ -0.79
VCAN-210ENST00000513960 ADRB2P07550 413 aa10.13□□□□□ -0.79
VCAN-210ENST00000513960 POTEJP0CG39 1038 aa10.13□□□□□ -0.79
VCAN-210ENST00000513960 MYL2P10916 166 aa10.13□□□□□ -0.79
VCAN-210ENST00000513960 PYGBP11216 843 aa10.13□□□□□ -0.79
VCAN-210ENST00000513960 GZMAP12544 262 aa10.13□□□□□ -0.79
VCAN-210ENST00000513960 AMPD1P23109 780 aa10.13□□□□□ -0.79
VCAN-210ENST00000513960 NPTX2P47972 431 aa10.13□□□□□ -0.79
VCAN-210ENST00000513960 NCKAP1LP55160 1127 aa10.13□□□□□ -0.79
VCAN-210ENST00000513960 YWHAGP61981 247 aaKnown RBP eCLIP10.13□□□□□ -0.79
VCAN-210ENST00000513960 MAP3K10Q02779 954 aa10.13□□□□□ -0.79
VCAN-210ENST00000513960 CAV1Q03135 178 aa10.13□□□□□ -0.79
VCAN-210ENST00000513960 SPP2Q13103 211 aa10.13□□□□□ -0.79
VCAN-210ENST00000513960 BAATQ14032 418 aaPredicted RBP10.13□□□□□ -0.79
VCAN-210ENST00000513960 EFTUD2Q15029 972 aaKnown RBP eCLIP10.13□□□□□ -0.79
VCAN-210ENST00000513960 TRABD2AQ86V40 505 aa10.13□□□□□ -0.79
VCAN-210ENST00000513960 EPS8L1Q8TE68 723 aa10.13□□□□□ -0.79
VCAN-210ENST00000513960 ATP6V0A1Q93050 837 aa10.13□□□□□ -0.79
VCAN-210ENST00000513960 FAM111AQ96PZ2 611 aa10.13□□□□□ -0.79
VCAN-210ENST00000513960 MANSC1Q9H8J5 431 aa10.13□□□□□ -0.79
VCAN-210ENST00000513960 RNF146Q9NTX7 359 aa10.13□□□□□ -0.79
VCAN-210ENST00000513960 HNRNPDLO14979 420 aaKnown RBP10.13□□□□□ -0.79
VCAN-210ENST00000513960 LPXNO60711 386 aa10.13□□□□□ -0.79
VCAN-210ENST00000513960 CCND2P30279 289 aa10.13□□□□□ -0.79
VCAN-210ENST00000513960 HADHBP55084 474 aaKnown RBP10.13□□□□□ -0.79
VCAN-210ENST00000513960 SMAD1Q15797 465 aaKnown RBP10.13□□□□□ -0.79
VCAN-210ENST00000513960 FAM71AQ8IYT1 594 aa10.13□□□□□ -0.79
VCAN-210ENST00000513960 SMC1BQ8NDV3 1235 aa10.13□□□□□ -0.79
VCAN-210ENST00000513960 PIP4K2CQ8TBX8 421 aa10.13□□□□□ -0.79
VCAN-210ENST00000513960 TCP10LQ8TDR4 215 aa10.13□□□□□ -0.79
VCAN-210ENST00000513960 MORC4Q8TE76 937 aa10.13□□□□□ -0.79
VCAN-210ENST00000513960 PRR11Q96HE9 360 aaPredicted RBP10.13□□□□□ -0.79
VCAN-210ENST00000513960 CHCHD3Q9NX63 227 aaKnown RBP10.13□□□□□ -0.79
VCAN-210ENST00000513960 GOLGB1Q14789 3259 aaKnown RBP10.13□□□□□ -0.79
VCAN-210ENST00000513960 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP10.12□□□□□ -0.79
VCAN-210ENST00000513960 ASMTLO95671 621 aa10.12□□□□□ -0.79
VCAN-210ENST00000513960 FDX1P10109 184 aa10.12□□□□□ -0.79
VCAN-210ENST00000513960 BGNP21810 368 aa10.12□□□□□ -0.79
VCAN-210ENST00000513960 SSTR1P30872 391 aa10.12□□□□□ -0.79
VCAN-210ENST00000513960 DSG1Q02413 1049 aa10.12□□□□□ -0.79
VCAN-210ENST00000513960 MAPK6Q16659 721 aa10.12□□□□□ -0.79
VCAN-210ENST00000513960 MTHFD1LQ6UB35 978 aa10.12□□□□□ -0.79
VCAN-210ENST00000513960 RINLQ6ZS11 566 aa10.12□□□□□ -0.79
VCAN-210ENST00000513960 CENPUQ71F23 418 aa10.12□□□□□ -0.79
VCAN-210ENST00000513960 FBXL13Q8NEE6 735 aa10.12□□□□□ -0.79
VCAN-210ENST00000513960 PLEKHO2Q8TD55 490 aa10.12□□□□□ -0.79
VCAN-210ENST00000513960 MIPEPQ99797 713 aa10.12□□□□□ -0.79
VCAN-210ENST00000513960 OSBPL8Q9BZF1 889 aa10.12□□□□□ -0.79
VCAN-210ENST00000513960 TMEM8AQ9HCN3 771 aa10.12□□□□□ -0.79
VCAN-210ENST00000513960 RAB20Q9NX57 234 aa10.12□□□□□ -0.79
VCAN-210ENST00000513960 CLIC5Q9NZA1 410 aa10.12□□□□□ -0.79
VCAN-210ENST00000513960 GABBR1Q9UBS5 961 aa10.12□□□□□ -0.79
VCAN-210ENST00000513960 USP20Q9Y2K6 914 aa10.12□□□□□ -0.79
VCAN-210ENST00000513960 ADGRA3Q8IWK6 1321 aa10.12□□□□□ -0.79
VCAN-210ENST00000513960 GSC2O15499 205 aa10.12□□□□□ -0.79
VCAN-210ENST00000513960 TRPA1O75762 1119 aa10.12□□□□□ -0.79
VCAN-210ENST00000513960 CCNE2O96020 404 aa10.12□□□□□ -0.79
VCAN-210ENST00000513960 T-ENOLP0DO92 83 aa10.12□□□□□ -0.79
VCAN-210ENST00000513960 TMPRSS15P98073 1019 aa10.12□□□□□ -0.79
VCAN-210ENST00000513960 CCDC15Q0P6D6 951 aa10.12□□□□□ -0.79
VCAN-210ENST00000513960 NR1H3Q13133 447 aa10.12□□□□□ -0.79
VCAN-210ENST00000513960 ACVR2BQ13705 512 aa10.12□□□□□ -0.79
VCAN-210ENST00000513960 PDK4Q16654 411 aa10.12□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms