RNA–Protein interactions for RNA: ENST00000513769.5

TPM3-221, Transcript of tropomyosin 3, humanhuman

TSL 3

Gene TPM3, Length 539 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-221ENST00000513769 AMPD2Q01433 879 aa10.5□□□□□ -0.73
TPM3-221ENST00000513769 PTPRNQ16849 979 aa10.5□□□□□ -0.73
TPM3-221ENST00000513769 SLC39A5Q6ZMH5 540 aa10.5□□□□□ -0.73
TPM3-221ENST00000513769 FAM126BQ8IXS8 530 aa10.5□□□□□ -0.73
TPM3-221ENST00000513769 MCOLN2Q8IZK6 566 aa10.5□□□□□ -0.73
TPM3-221ENST00000513769 TMEM86AQ8N2M4 240 aa10.5□□□□□ -0.73
TPM3-221ENST00000513769 MSANTD4Q8NCY6 345 aa10.5□□□□□ -0.73
TPM3-221ENST00000513769 GSTCDQ8NEC7 633 aa10.5□□□□□ -0.73
TPM3-221ENST00000513769 STK32AQ8WU08 396 aa10.5□□□□□ -0.73
TPM3-221ENST00000513769 SLC20A1Q8WUM9 679 aa10.5□□□□□ -0.73
TPM3-221ENST00000513769 ATRIPQ8WXE1 791 aa10.5□□□□□ -0.73
TPM3-221ENST00000513769 WNT8BQ93098 351 aa10.5□□□□□ -0.73
TPM3-221ENST00000513769 PBKQ96KB5 322 aa10.5□□□□□ -0.73
TPM3-221ENST00000513769 DEFB118Q96PH6 123 aa10.5□□□□□ -0.73
TPM3-221ENST00000513769 MMS19Q96T76 1030 aa10.5□□□□□ -0.73
TPM3-221ENST00000513769 ADAM2Q99965 735 aa10.5□□□□□ -0.73
TPM3-221ENST00000513769 SELENOOQ9BVL4 669 aa10.5□□□□□ -0.73
TPM3-221ENST00000513769 TRPV6Q9H1D0 765 aa10.5□□□□□ -0.73
TPM3-221ENST00000513769 TRIM10Q9UDY6 481 aa10.5□□□□□ -0.73
TPM3-221ENST00000513769 SALL4Q9UJQ4 1053 aa10.5□□□□□ -0.73
TPM3-221ENST00000513769 AMFRQ9UKV5 643 aa10.5□□□□□ -0.73
TPM3-221ENST00000513769 STRIP2Q9ULQ0 834 aa10.5□□□□□ -0.73
TPM3-221ENST00000513769 SNX12Q9UMY4 172 aa10.5□□□□□ -0.73
TPM3-221ENST00000513769 HES2Q9Y543 173 aa10.5□□□□□ -0.73
TPM3-221ENST00000513769 NCANO14594 1321 aa10.5□□□□□ -0.73
TPM3-221ENST00000513769 CITO14578 2027 aa10.5□□□□□ -0.73
TPM3-221ENST00000513769 ANK1P16157 1881 aa10.49□□□□□ -0.73
TPM3-221ENST00000513769 MKI67P46013 3256 aaKnown RBP10.49□□□□□ -0.73
TPM3-221ENST00000513769 ARL5CA6NH57 179 aa10.49□□□□□ -0.73
TPM3-221ENST00000513769 MIF4GDA9UHW6 222 aaKnown RBP10.49□□□□□ -0.73
TPM3-221ENST00000513769 DYNC1I1O14576 645 aa10.49□□□□□ -0.73
TPM3-221ENST00000513769 THAP12O43422 761 aa10.49□□□□□ -0.73
TPM3-221ENST00000513769 HUS1O60921 280 aa10.49□□□□□ -0.73
TPM3-221ENST00000513769 PALMO75781 387 aa10.49□□□□□ -0.73
TPM3-221ENST00000513769 TFRCP02786 760 aaKnown RBP10.49□□□□□ -0.73
TPM3-221ENST00000513769 CALB1P05937 261 aa10.49□□□□□ -0.73
TPM3-221ENST00000513769 MMP8P22894 467 aa10.49□□□□□ -0.73
TPM3-221ENST00000513769 CD52P31358 61 aa10.49□□□□□ -0.73
TPM3-221ENST00000513769 GNL1P36915 607 aaPredicted RBP10.49□□□□□ -0.73
TPM3-221ENST00000513769 PAFAH1B1P43034 410 aa10.49□□□□□ -0.73
TPM3-221ENST00000513769 LHX1P48742 406 aa10.49□□□□□ -0.73
TPM3-221ENST00000513769 CKAP4Q07065 602 aaKnown RBP10.49□□□□□ -0.73
TPM3-221ENST00000513769 ZNF268Q14587 947 aaPredicted RBP10.49□□□□□ -0.73
TPM3-221ENST00000513769 RPS6KA1Q15418 735 aa10.49□□□□□ -0.73
TPM3-221ENST00000513769 SGO2Q562F6 1265 aa10.49□□□□□ -0.73
TPM3-221ENST00000513769 DCLRE1AQ6PJP8 1040 aa10.49□□□□□ -0.73
TPM3-221ENST00000513769 LCLAT1Q6UWP7 414 aa10.49□□□□□ -0.73
TPM3-221ENST00000513769 AGMOQ6ZNB7 445 aa10.49□□□□□ -0.73
TPM3-221ENST00000513769 ECHDC2Q86YB7 292 aa10.49□□□□□ -0.73
TPM3-221ENST00000513769 LRRC57Q8N9N7 239 aa10.49□□□□□ -0.73
TPM3-221ENST00000513769 SLC4A11Q8NBS3 891 aa10.49□□□□□ -0.73
TPM3-221ENST00000513769 APPL2Q8NEU8 664 aa10.49□□□□□ -0.73
TPM3-221ENST00000513769 PPP1R13LQ8WUF5 828 aa10.49□□□□□ -0.73
TPM3-221ENST00000513769 CYFIP2Q96F07 1278 aa10.49□□□□□ -0.73
TPM3-221ENST00000513769 TNIP3Q96KP6 325 aa10.49□□□□□ -0.73
TPM3-221ENST00000513769 HEXIM2Q96MH2 286 aaKnown RBP10.49□□□□□ -0.73
TPM3-221ENST00000513769 ARID3AQ99856 593 aa10.49□□□□□ -0.73
TPM3-221ENST00000513769 PACSIN1Q9BY11 444 aa10.49□□□□□ -0.73
TPM3-221ENST00000513769 THAP2Q9H0W7 228 aa10.49□□□□□ -0.73
TPM3-221ENST00000513769 CYLDQ9NQC7 956 aa10.49□□□□□ -0.73
TPM3-221ENST00000513769 PARVAQ9NVD7 372 aa10.49□□□□□ -0.73
TPM3-221ENST00000513769 ADAM22Q9P0K1 906 aa10.49□□□□□ -0.73
TPM3-221ENST00000513769 SNX9Q9Y5X1 595 aa10.49□□□□□ -0.73
TPM3-221ENST00000513769 SCINQ9Y6U3 715 aa10.49□□□□□ -0.73
TPM3-221ENST00000513769 HTTP42858 3142 aa10.49□□□□□ -0.73
TPM3-221ENST00000513769 C9IYK1 514 aa10.48□□□□□ -0.73
TPM3-221ENST00000513769 MYO1FO00160 1098 aa10.48□□□□□ -0.73
TPM3-221ENST00000513769 ENPP3O14638 875 aa10.48□□□□□ -0.73
TPM3-221ENST00000513769 PTGESO14684 152 aa10.48□□□□□ -0.73
TPM3-221ENST00000513769 BUB1O43683 1085 aa10.48□□□□□ -0.73
TPM3-221ENST00000513769 SETSIPP0DME0 302 aa10.48□□□□□ -0.73
TPM3-221ENST00000513769 GHRP10912 638 aa10.48□□□□□ -0.73
TPM3-221ENST00000513769 GABRB2P47870 512 aa10.48□□□□□ -0.73
TPM3-221ENST00000513769 GSCP56915 257 aaPredicted RBP10.48□□□□□ -0.73
TPM3-221ENST00000513769 NOMO3P69849 1222 aa10.48□□□□□ -0.73
TPM3-221ENST00000513769 ACAP1Q15027 740 aa10.48□□□□□ -0.73
TPM3-221ENST00000513769 CFAP221Q4G0U5 840 aa10.48□□□□□ -0.73
TPM3-221ENST00000513769 PLEKHG4Q58EX7 1191 aa10.48□□□□□ -0.73
TPM3-221ENST00000513769 TAF3Q5VWG9 929 aa10.48□□□□□ -0.73
TPM3-221ENST00000513769 ARHGAP17Q68EM7 881 aa10.48□□□□□ -0.73
TPM3-221ENST00000513769 PLEKHA7Q6IQ23 1121 aa10.48□□□□□ -0.73
TPM3-221ENST00000513769 C11orf63Q6NUN7 778 aa10.48□□□□□ -0.73
TPM3-221ENST00000513769 LRRC8DQ7L1W4 858 aa10.48□□□□□ -0.73
TPM3-221ENST00000513769 ZNF572Q7Z3I7 529 aaPredicted RBP10.48□□□□□ -0.73
TPM3-221ENST00000513769 PEX26Q7Z412 305 aa10.48□□□□□ -0.73
TPM3-221ENST00000513769 DAAM2Q86T65 1068 aa10.48□□□□□ -0.73
TPM3-221ENST00000513769 RTN4RL1Q86UN2 441 aaPredicted RBP10.48□□□□□ -0.73
TPM3-221ENST00000513769 ERICH1Q86X53 443 aa10.48□□□□□ -0.73
TPM3-221ENST00000513769 WHAMMQ8TF30 809 aa10.48□□□□□ -0.73
TPM3-221ENST00000513769 HES6Q96HZ4 224 aa10.48□□□□□ -0.73
TPM3-221ENST00000513769 TLR10Q9BXR5 811 aa10.48□□□□□ -0.73
TPM3-221ENST00000513769 WNT8AQ9H1J5 351 aa10.48□□□□□ -0.73
TPM3-221ENST00000513769 RSAD1Q9HA92 442 aa10.48□□□□□ -0.73
TPM3-221ENST00000513769 UTP3Q9NQZ2 479 aaKnown RBP eCLIP10.48□□□□□ -0.73
TPM3-221ENST00000513769 CTTNBP2NLQ9P2B4 639 aa10.48□□□□□ -0.73
TPM3-221ENST00000513769 GMPR2Q9P2T1 348 aaKnown RBP10.48□□□□□ -0.73
TPM3-221ENST00000513769 DSEQ9UL01 958 aa10.48□□□□□ -0.73
TPM3-221ENST00000513769 TTC7AQ9ULT0 858 aaPredicted RBP10.48□□□□□ -0.73
TPM3-221ENST00000513769 STXBP5LQ9Y2K9 1186 aa10.48□□□□□ -0.73
TPM3-221ENST00000513769 HYOU1Q9Y4L1 999 aa10.48□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms