RNA–Protein interactions for RNA: ENST00000512985.1

CDK7-209, Transcript of cyclin dependent kinase 7, humanhuman

TSL 2

Gene CDK7, Length 261 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK7-209ENST00000512985 GBP6Q6ZN66 633 aa13.62□□□□□ -0.23
CDK7-209ENST00000512985 OTOP3Q7RTS5 596 aa13.62□□□□□ -0.23
CDK7-209ENST00000512985 PLCD3Q8N3E9 789 aa13.62□□□□□ -0.23
CDK7-209ENST00000512985 ATAD1Q8NBU5 361 aa13.62□□□□□ -0.23
CDK7-209ENST00000512985 B3GALNT2Q8NCR0 500 aa13.62□□□□□ -0.23
CDK7-209ENST00000512985 MYCBPAPQ8TBZ2 947 aa13.62□□□□□ -0.23
CDK7-209ENST00000512985 FAM200AQ8TCP9 573 aa13.62□□□□□ -0.23
CDK7-209ENST00000512985 TMEM209Q96SK2 561 aa13.62□□□□□ -0.23
CDK7-209ENST00000512985 SEPT5Q99719 369 aaPredicted RBP13.62□□□□□ -0.23
CDK7-209ENST00000512985 BPIFA3Q9BQP9 254 aa13.62□□□□□ -0.23
CDK7-209ENST00000512985 RTP3Q9BQQ7 232 aa13.62□□□□□ -0.23
CDK7-209ENST00000512985 MRPL45Q9BRJ2 306 aaKnown RBP13.62□□□□□ -0.23
CDK7-209ENST00000512985 TUBGCP2Q9BSJ2 902 aa13.62□□□□□ -0.23
CDK7-209ENST00000512985 PI4K2AQ9BTU6 479 aa13.62□□□□□ -0.23
CDK7-209ENST00000512985 ELOVL4Q9GZR5 314 aa13.62□□□□□ -0.23
CDK7-209ENST00000512985 DNAJC25Q9H1X3 360 aa13.62□□□□□ -0.23
CDK7-209ENST00000512985 SMYD3Q9H7B4 428 aa13.62□□□□□ -0.23
CDK7-209ENST00000512985 WDR6Q9NNW5 1121 aaKnown RBP13.62□□□□□ -0.23
CDK7-209ENST00000512985 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP13.62□□□□□ -0.23
CDK7-209ENST00000512985 GTF3C4Q9UKN8 822 aa13.62□□□□□ -0.23
CDK7-209ENST00000512985 USTQ9Y2C2 406 aa13.62□□□□□ -0.23
CDK7-209ENST00000512985 YIPF1Q9Y548 306 aa13.62□□□□□ -0.23
CDK7-209ENST00000512985 ZFP37Q9Y6Q3 630 aaPredicted RBP13.62□□□□□ -0.23
CDK7-209ENST00000512985 MTCL1Q9Y4B5 1905 aaKnown RBP13.62□□□□□ -0.23
CDK7-209ENST00000512985 CCL16O15467 120 aa13.61□□□□□ -0.23
CDK7-209ENST00000512985 SEC24AO95486 1093 aa13.61□□□□□ -0.23
CDK7-209ENST00000512985 IL9P15248 144 aa13.61□□□□□ -0.23
CDK7-209ENST00000512985 PTPN1P18031 435 aaKnown RBP13.61□□□□□ -0.23
CDK7-209ENST00000512985 ANXA13P27216 316 aa13.61□□□□□ -0.23
CDK7-209ENST00000512985 MAGEA11P43364 429 aa13.61□□□□□ -0.23
CDK7-209ENST00000512985 CDH8P55286 799 aa13.61□□□□□ -0.23
CDK7-209ENST00000512985 CYP27A1Q02318 531 aa13.61□□□□□ -0.23
CDK7-209ENST00000512985 INCA1Q0VD86 236 aa13.61□□□□□ -0.23
CDK7-209ENST00000512985 TWF1Q12792 350 aa13.61□□□□□ -0.23
CDK7-209ENST00000512985 ANO6Q4KMQ2 910 aa13.61□□□□□ -0.23
CDK7-209ENST00000512985 PABPC1LQ4VXU2 614 aaKnown RBP13.61□□□□□ -0.23
CDK7-209ENST00000512985 TCP11X2Q5H9J9 407 aa13.61□□□□□ -0.23
CDK7-209ENST00000512985 SMYD5Q6GMV2 418 aa13.61□□□□□ -0.23
CDK7-209ENST00000512985 SPOPLQ6IQ16 392 aa13.61□□□□□ -0.23
CDK7-209ENST00000512985 FAM171BQ6P995 826 aa13.61□□□□□ -0.23
CDK7-209ENST00000512985 VSTM1Q6UX27 236 aa13.61□□□□□ -0.23
CDK7-209ENST00000512985 ENOSF1Q7L5Y1 443 aa13.61□□□□□ -0.23
CDK7-209ENST00000512985 OSTM1Q86WC4 334 aa13.61□□□□□ -0.23
CDK7-209ENST00000512985 ADAMTS19Q8TE59 1207 aa13.61□□□□□ -0.23
CDK7-209ENST00000512985 ZNF707Q96C28 371 aaPredicted RBP13.61□□□□□ -0.23
CDK7-209ENST00000512985 UHRF1Q96T88 793 aaPredicted RBP13.61□□□□□ -0.23
CDK7-209ENST00000512985 NT5C1AQ9BXI3 368 aa13.61□□□□□ -0.23
CDK7-209ENST00000512985 ASAH2Q9NR71 780 aa13.61□□□□□ -0.23
CDK7-209ENST00000512985 GCNT4Q9P109 453 aa13.61□□□□□ -0.23
CDK7-209ENST00000512985 CLUHO75153 1309 aa13.61□□□□□ -0.23
CDK7-209ENST00000512985 PRUNE2Q8WUY3 3088 aa13.6□□□□□ -0.23
CDK7-209ENST00000512985 SYCE3A1L190 88 aa13.6□□□□□ -0.23
CDK7-209ENST00000512985 XIRP2A4UGR9 3374 aa13.6□□□□□ -0.23
CDK7-209ENST00000512985 TRIM66O15016 1216 aa13.6□□□□□ -0.23
CDK7-209ENST00000512985 WEE2P0C1S8 567 aa13.6□□□□□ -0.23
CDK7-209ENST00000512985 CSH1P0DML2 217 aa13.6□□□□□ -0.23
CDK7-209ENST00000512985 CSH2P0DML3 217 aa13.6□□□□□ -0.23
CDK7-209ENST00000512985 HAPLN1P10915 354 aaPredicted RBP13.6□□□□□ -0.23
CDK7-209ENST00000512985 LMO2P25791 158 aa13.6□□□□□ -0.23
CDK7-209ENST00000512985 SSTR3P32745 418 aaPredicted RBP13.6□□□□□ -0.23
CDK7-209ENST00000512985 NDST1P52848 882 aa13.6□□□□□ -0.23
CDK7-209ENST00000512985 PSMC1P62191 440 aaKnown RBP13.6□□□□□ -0.23
CDK7-209ENST00000512985 CUL2Q13617 745 aa13.6□□□□□ -0.23
CDK7-209ENST00000512985 EXOC3L4Q17RC7 722 aa13.6□□□□□ -0.23
CDK7-209ENST00000512985 VWA3BQ502W6 1294 aa13.6□□□□□ -0.23
CDK7-209ENST00000512985 MDH1BQ5I0G3 518 aa13.6□□□□□ -0.23
CDK7-209ENST00000512985 SCARA3Q6AZY7 606 aa13.6□□□□□ -0.23
CDK7-209ENST00000512985 PDZD4Q76G19 769 aaPredicted RBP13.6□□□□□ -0.23
CDK7-209ENST00000512985 LRRTM3Q86VH5 581 aa13.6□□□□□ -0.23
CDK7-209ENST00000512985 PPM1KQ8N3J5 372 aa13.6□□□□□ -0.23
CDK7-209ENST00000512985 TDRD5Q8NAT2 981 aaKnown RBP13.6□□□□□ -0.23
CDK7-209ENST00000512985 EHBP1Q8NDI1 1231 aa13.6□□□□□ -0.23
CDK7-209ENST00000512985 SEMA4DQ92854 862 aa13.6□□□□□ -0.23
CDK7-209ENST00000512985 JAKMIP2Q96AA8 810 aa13.6□□□□□ -0.23
CDK7-209ENST00000512985 GCNAQ96QF7 691 aa13.6□□□□□ -0.23
CDK7-209ENST00000512985 MED15Q96RN5 788 aa13.6□□□□□ -0.23
CDK7-209ENST00000512985 MED10Q9BTT4 135 aa13.6□□□□□ -0.23
CDK7-209ENST00000512985 NDST4Q9H3R1 872 aa13.6□□□□□ -0.23
CDK7-209ENST00000512985 POMKQ9H5K3 350 aa13.6□□□□□ -0.23
CDK7-209ENST00000512985 APOBEC3GQ9HC16 384 aaKnown RBP13.6□□□□□ -0.23
CDK7-209ENST00000512985 AVENQ9NQS1 362 aaPredicted RBP13.6□□□□□ -0.23
CDK7-209ENST00000512985 UTP3Q9NQZ2 479 aaKnown RBP eCLIP13.6□□□□□ -0.23
CDK7-209ENST00000512985 UXTQ9UBK9 157 aaPredicted RBP13.6□□□□□ -0.23
CDK7-209ENST00000512985 SLC27A5Q9Y2P5 690 aa13.6□□□□□ -0.23
CDK7-209ENST00000512985 MYBPHLA2RUH7 354 aa13.59□□□□□ -0.23
CDK7-209ENST00000512985 CILPO75339 1184 aa13.59□□□□□ -0.23
CDK7-209ENST00000512985 MICAL2O94851 1124 aa13.59□□□□□ -0.23
CDK7-209ENST00000512985 CD58P19256 250 aa13.59□□□□□ -0.23
CDK7-209ENST00000512985 FSHRP23945 695 aa13.59□□□□□ -0.23
CDK7-209ENST00000512985 GRIK1P39086 918 aa13.59□□□□□ -0.23
CDK7-209ENST00000512985 RAP1GAPP47736 663 aa13.59□□□□□ -0.23
CDK7-209ENST00000512985 ZNF165P49910 485 aa13.59□□□□□ -0.23
CDK7-209ENST00000512985 SLC8A3P57103 927 aa13.59□□□□□ -0.23
CDK7-209ENST00000512985 GCNT1Q02742 428 aa13.59□□□□□ -0.23
CDK7-209ENST00000512985 NFKBIBQ15653 356 aa13.59□□□□□ -0.23
CDK7-209ENST00000512985 FKBP15Q5T1M5 1219 aa13.59□□□□□ -0.23
CDK7-209ENST00000512985 C11orf57Q6ZUT1 292 aaPredicted RBP13.59□□□□□ -0.23
CDK7-209ENST00000512985 GRASPQ7Z6J2 395 aaPredicted RBP13.59□□□□□ -0.23
CDK7-209ENST00000512985 IRF2BP1Q8IU81 584 aa13.59□□□□□ -0.23
CDK7-209ENST00000512985 CRYBG2Q8N1P7 616 aa13.59□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms