RNA–Protein interactions for RNA: ENST00000512707.1

PFDN1-204, Transcript of prefoldin subunit 1, humanhuman

TSL 2

Gene PFDN1, Length 798 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN1-204ENST00000512707 SOWAHDA6NJG2 315 aa11.53□□□□□ -0.56
PFDN1-204ENST00000512707 CCP110O43303 1012 aa11.53□□□□□ -0.56
PFDN1-204ENST00000512707 LPXNO60711 386 aa11.53□□□□□ -0.56
PFDN1-204ENST00000512707 FGF18O76093 207 aa11.53□□□□□ -0.56
PFDN1-204ENST00000512707 NDUFA10O95299 355 aa11.53□□□□□ -0.56
PFDN1-204ENST00000512707 RB1P06400 928 aa11.53□□□□□ -0.56
PFDN1-204ENST00000512707 PTPN1P18031 435 aaKnown RBP11.53□□□□□ -0.56
PFDN1-204ENST00000512707 BRD2P25440 801 aaKnown RBP11.53□□□□□ -0.56
PFDN1-204ENST00000512707 BMPR1AP36894 532 aa11.53□□□□□ -0.56
PFDN1-204ENST00000512707 RABGGTBP53611 331 aa11.53□□□□□ -0.56
PFDN1-204ENST00000512707 SNX16P57768 344 aa11.53□□□□□ -0.56
PFDN1-204ENST00000512707 CCZ1BP86790 482 aa11.53□□□□□ -0.56
PFDN1-204ENST00000512707 CCZ1P86791 482 aaPredicted RBP11.53□□□□□ -0.56
PFDN1-204ENST00000512707 SMARCB1Q12824 385 aa11.53□□□□□ -0.56
PFDN1-204ENST00000512707 ORC1Q13415 861 aa11.53□□□□□ -0.56
PFDN1-204ENST00000512707 SLC18A3Q16572 532 aa11.53□□□□□ -0.56
PFDN1-204ENST00000512707 VARS2Q5ST30 1063 aaKnown RBP11.53□□□□□ -0.56
PFDN1-204ENST00000512707 C10orf76Q5T2E6 689 aa11.53□□□□□ -0.56
PFDN1-204ENST00000512707 C4orf50Q6ZRC1 276 aa11.53□□□□□ -0.56
PFDN1-204ENST00000512707 ZNF571Q7Z3V5 609 aaPredicted RBP11.53□□□□□ -0.56
PFDN1-204ENST00000512707 GLYCTKQ8IVS8 523 aa11.53□□□□□ -0.56
PFDN1-204ENST00000512707 TMEM35BQ8NCS4 154 aa11.53□□□□□ -0.56
PFDN1-204ENST00000512707 WHAMMQ8TF30 809 aa11.53□□□□□ -0.56
PFDN1-204ENST00000512707 ZNF606Q8WXB4 792 aa11.53□□□□□ -0.56
PFDN1-204ENST00000512707 TGS1Q96RS0 853 aaKnown RBP11.53□□□□□ -0.56
PFDN1-204ENST00000512707 CHP1Q99653 195 aa11.53□□□□□ -0.56
PFDN1-204ENST00000512707 MED10Q9BTT4 135 aa11.53□□□□□ -0.56
PFDN1-204ENST00000512707 HERC2P3Q9BVR0 1158 aa11.53□□□□□ -0.56
PFDN1-204ENST00000512707 ADAMTS1Q9UHI8 967 aa11.53□□□□□ -0.56
PFDN1-204ENST00000512707 EPN1Q9Y6I3 576 aaPredicted RBP11.53□□□□□ -0.56
PFDN1-204ENST00000512707 EIF3CLB5ME19 914 aaKnown RBP11.52□□□□□ -0.57
PFDN1-204ENST00000512707 M0QYV0 167 aa11.52□□□□□ -0.57
PFDN1-204ENST00000512707 MAP3K13O43283 966 aa11.52□□□□□ -0.57
PFDN1-204ENST00000512707 CA3P07451 260 aa11.52□□□□□ -0.57
PFDN1-204ENST00000512707 MMEP08473 750 aa11.52□□□□□ -0.57
PFDN1-204ENST00000512707 PLEKP08567 350 aaPredicted RBP11.52□□□□□ -0.57
PFDN1-204ENST00000512707 CCDC175P0C221 793 aa11.52□□□□□ -0.57
PFDN1-204ENST00000512707 CPB1P15086 417 aa11.52□□□□□ -0.57
PFDN1-204ENST00000512707 ACAT1P24752 427 aaKnown RBP11.52□□□□□ -0.57
PFDN1-204ENST00000512707 LMO2P25791 158 aa11.52□□□□□ -0.57
PFDN1-204ENST00000512707 NSFP46459 744 aaKnown RBP11.52□□□□□ -0.57
PFDN1-204ENST00000512707 PSMC1P62191 440 aaKnown RBP11.52□□□□□ -0.57
PFDN1-204ENST00000512707 PLCB3Q01970 1234 aa11.52□□□□□ -0.57
PFDN1-204ENST00000512707 UBE3AQ05086 875 aa11.52□□□□□ -0.57
PFDN1-204ENST00000512707 CNGA2Q16280 664 aa11.52□□□□□ -0.57
PFDN1-204ENST00000512707 PSMD5Q16401 504 aa11.52□□□□□ -0.57
PFDN1-204ENST00000512707 NFE2Q16621 373 aaPredicted RBP11.52□□□□□ -0.57
PFDN1-204ENST00000512707 GOLGA7BQ2TAP0 167 aa11.52□□□□□ -0.57
PFDN1-204ENST00000512707 MDH1BQ5I0G3 518 aa11.52□□□□□ -0.57
PFDN1-204ENST00000512707 INTS6LQ5JSJ4 861 aaKnown RBP11.52□□□□□ -0.57
PFDN1-204ENST00000512707 ARHGAP17Q68EM7 881 aa11.52□□□□□ -0.57
PFDN1-204ENST00000512707 OSTM1Q86WC4 334 aa11.52□□□□□ -0.57
PFDN1-204ENST00000512707 TMEM173Q86WV6 379 aaPredicted RBP11.52□□□□□ -0.57
PFDN1-204ENST00000512707 TMEM139Q8IV31 216 aa11.52□□□□□ -0.57
PFDN1-204ENST00000512707 GPR65Q8IYL9 337 aa11.52□□□□□ -0.57
PFDN1-204ENST00000512707 VPS52Q8N1B4 723 aa11.52□□□□□ -0.57
PFDN1-204ENST00000512707 MYCBPAPQ8TBZ2 947 aa11.52□□□□□ -0.57
PFDN1-204ENST00000512707 SLC20A1Q8WUM9 679 aa11.52□□□□□ -0.57
PFDN1-204ENST00000512707 BCL7CQ8WUZ0 217 aaPredicted RBP11.52□□□□□ -0.57
PFDN1-204ENST00000512707 RIN2Q8WYP3 895 aaPredicted RBP11.52□□□□□ -0.57
PFDN1-204ENST00000512707 PIK3R5Q8WYR1 880 aa11.52□□□□□ -0.57
PFDN1-204ENST00000512707 CYFIP2Q96F07 1278 aa11.52□□□□□ -0.57
PFDN1-204ENST00000512707 TRIM11Q96F44 468 aa11.52□□□□□ -0.57
PFDN1-204ENST00000512707 ZNF830Q96NB3 372 aaPredicted RBP11.52□□□□□ -0.57
PFDN1-204ENST00000512707 TWNKQ96RR1 684 aa11.52□□□□□ -0.57
PFDN1-204ENST00000512707 EIF3CQ99613 913 aaKnown RBP11.52□□□□□ -0.57
PFDN1-204ENST00000512707 ZNF518BQ9C0D4 1074 aa11.52□□□□□ -0.57
PFDN1-204ENST00000512707 MIS12Q9H081 205 aa11.52□□□□□ -0.57
PFDN1-204ENST00000512707 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP11.52□□□□□ -0.57
PFDN1-204ENST00000512707 MRPL17Q9NRX2 175 aaKnown RBP11.52□□□□□ -0.57
PFDN1-204ENST00000512707 FAM49BQ9NUQ9 324 aa11.52□□□□□ -0.57
PFDN1-204ENST00000512707 PCDHGC3Q9UN70 934 aa11.52□□□□□ -0.57
PFDN1-204ENST00000512707 WDR3Q9UNX4 943 aaKnown RBP eCLIP11.52□□□□□ -0.57
PFDN1-204ENST00000512707 LZTS1Q9Y250 596 aa11.52□□□□□ -0.57
PFDN1-204ENST00000512707 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP11.52□□□□□ -0.57
PFDN1-204ENST00000512707 PTPRSQ13332 1948 aa11.51□□□□□ -0.57
PFDN1-204ENST00000512707 LCHNA4D1U4 455 aa11.51□□□□□ -0.57
PFDN1-204ENST00000512707 O00370 1275 aa11.51□□□□□ -0.57
PFDN1-204ENST00000512707 ZSCAN12O43309 604 aa11.51□□□□□ -0.57
PFDN1-204ENST00000512707 SETSIPP0DME0 302 aa11.51□□□□□ -0.57
PFDN1-204ENST00000512707 GZMAP12544 262 aa11.51□□□□□ -0.57
PFDN1-204ENST00000512707 IGFBP6P24592 240 aaPredicted RBP11.51□□□□□ -0.57
PFDN1-204ENST00000512707 CA8P35219 290 aa11.51□□□□□ -0.57
PFDN1-204ENST00000512707 BCAT1P54687 386 aa11.51□□□□□ -0.57
PFDN1-204ENST00000512707 CYP27A1Q02318 531 aa11.51□□□□□ -0.57
PFDN1-204ENST00000512707 DSG1Q02413 1049 aa11.51□□□□□ -0.57
PFDN1-204ENST00000512707 CCDC122Q5T0U0 273 aa11.51□□□□□ -0.57
PFDN1-204ENST00000512707 PPP2R2DQ66LE6 453 aa11.51□□□□□ -0.57
PFDN1-204ENST00000512707 FAM109BQ6ICB4 259 aaPredicted RBP11.51□□□□□ -0.57
PFDN1-204ENST00000512707 ALKBH5Q6P6C2 394 aaKnown RBP11.51□□□□□ -0.57
PFDN1-204ENST00000512707 LCLAT1Q6UWP7 414 aa11.51□□□□□ -0.57
PFDN1-204ENST00000512707 KIAA1328Q86T90 577 aa11.51□□□□□ -0.57
PFDN1-204ENST00000512707 SPATA2LQ8IUW3 424 aaPredicted RBP11.51□□□□□ -0.57
PFDN1-204ENST00000512707 KLHL23Q8NBE8 558 aa11.51□□□□□ -0.57
PFDN1-204ENST00000512707 DDX1Q92499 740 aaKnown RBP11.51□□□□□ -0.57
PFDN1-204ENST00000512707 LHX5Q9H2C1 402 aa11.51□□□□□ -0.57
PFDN1-204ENST00000512707 KCNF1Q9H3M0 494 aa11.51□□□□□ -0.57
PFDN1-204ENST00000512707 DPEP3Q9H4B8 488 aa11.51□□□□□ -0.57
PFDN1-204ENST00000512707 SLC28A3Q9HAS3 691 aa11.51□□□□□ -0.57
PFDN1-204ENST00000512707 ACP6Q9NPH0 428 aa11.51□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms