RNA–Protein interactions for RNA: ENST00000512617.6

PVT1-202, Transcript of Pvt1 oncogene, humanhuman

TSL 3

Gene PVT1, Length 383 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-202ENST00000512617 PHYKPLQ8IUZ5 450 aa3.58□□□□□ -1.84
PVT1-202ENST00000512617 SPNS2Q8IVW8 549 aa3.58□□□□□ -1.84
PVT1-202ENST00000512617 WDR63Q8IWG1 891 aa3.58□□□□□ -1.84
PVT1-202ENST00000512617 SCN4BQ8IWT1 228 aa3.58□□□□□ -1.84
PVT1-202ENST00000512617 ULK2Q8IYT8 1036 aa3.58□□□□□ -1.84
PVT1-202ENST00000512617 SCML4Q8N228 414 aa3.58□□□□□ -1.84
PVT1-202ENST00000512617 ANKRD35Q8N283 1001 aa3.58□□□□□ -1.84
PVT1-202ENST00000512617 AGGF1Q8N302 714 aaeCLIP3.58□□□□□ -1.84
PVT1-202ENST00000512617 POMGNT2Q8NAT1 580 aa3.58□□□□□ -1.84
PVT1-202ENST00000512617 RNF217Q8TC41 542 aa3.58□□□□□ -1.84
PVT1-202ENST00000512617 FAM216AQ8WUB2 273 aa3.58□□□□□ -1.84
PVT1-202ENST00000512617 FATE1Q969F0 183 aa3.58□□□□□ -1.84
PVT1-202ENST00000512617 NMD3Q96D46 503 aaKnown RBP3.58□□□□□ -1.84
PVT1-202ENST00000512617 KTI12Q96EK9 354 aaPredicted RBP3.58□□□□□ -1.84
PVT1-202ENST00000512617 PGAP3Q96FM1 320 aaPredicted RBP3.58□□□□□ -1.84
PVT1-202ENST00000512617 CFAP36Q96G28 342 aa3.58□□□□□ -1.84
PVT1-202ENST00000512617 BORCS6Q96GS4 357 aa3.58□□□□□ -1.84
PVT1-202ENST00000512617 APOPT1Q96IL0 206 aa3.58□□□□□ -1.84
PVT1-202ENST00000512617 MAML3Q96JK9 1138 aa3.58□□□□□ -1.84
PVT1-202ENST00000512617 ZNF830Q96NB3 372 aaPredicted RBP3.58□□□□□ -1.84
PVT1-202ENST00000512617 TRAPPC9Q96Q05 1148 aa3.58□□□□□ -1.84
PVT1-202ENST00000512617 RAB3IPQ96QF0 476 aaPredicted RBP3.58□□□□□ -1.84
PVT1-202ENST00000512617 HS3ST6Q96QI5 342 aa3.58□□□□□ -1.84
PVT1-202ENST00000512617 GDF15Q99988 308 aa3.58□□□□□ -1.84
PVT1-202ENST00000512617 CRACR2AQ9BSW2 395 aa3.58□□□□□ -1.84
PVT1-202ENST00000512617 ADI1Q9BV57 179 aa3.58□□□□□ -1.84
PVT1-202ENST00000512617 APOL6Q9BWW8 343 aa3.58□□□□□ -1.84
PVT1-202ENST00000512617 KLF16Q9BXK1 252 aaPredicted RBP3.58□□□□□ -1.84
PVT1-202ENST00000512617 KRT23Q9C075 422 aa3.58□□□□□ -1.84
PVT1-202ENST00000512617 UBE2OQ9C0C9 1292 aaKnown RBP3.58□□□□□ -1.84
PVT1-202ENST00000512617 NT5C3AQ9H0P0 336 aa3.58□□□□□ -1.84
PVT1-202ENST00000512617 POFUT1Q9H488 388 aa3.58□□□□□ -1.84
PVT1-202ENST00000512617 BRF2Q9HAW0 419 aa3.58□□□□□ -1.84
PVT1-202ENST00000512617 MID1IP1Q9NPA3 183 aa3.58□□□□□ -1.84
PVT1-202ENST00000512617 PRDM8Q9NQV8 689 aa3.58□□□□□ -1.84
PVT1-202ENST00000512617 TAS2R10Q9NYW0 307 aa3.58□□□□□ -1.84
PVT1-202ENST00000512617 MRPL15Q9P015 296 aaKnown RBP3.58□□□□□ -1.84
PVT1-202ENST00000512617 NDUFAF4Q9P032 175 aa3.58□□□□□ -1.84
PVT1-202ENST00000512617 ACTR3BQ9P1U1 418 aa3.58□□□□□ -1.84
PVT1-202ENST00000512617 EXTL2Q9UBQ6 330 aa3.58□□□□□ -1.84
PVT1-202ENST00000512617 ITM2BQ9Y287 266 aa3.58□□□□□ -1.84
PVT1-202ENST00000512617 KLHL20Q9Y2M5 609 aa3.58□□□□□ -1.84
PVT1-202ENST00000512617 MTO1Q9Y2Z2 717 aaKnown RBP3.58□□□□□ -1.84
PVT1-202ENST00000512617 CCL27Q9Y4X3 112 aa3.58□□□□□ -1.84
PVT1-202ENST00000512617 PCDHB1Q9Y5F3 818 aa3.58□□□□□ -1.84
PVT1-202ENST00000512617 PCDHGC4Q9Y5F7 938 aa3.58□□□□□ -1.84
PVT1-202ENST00000512617 PCDHA3Q9Y5H8 950 aa3.58□□□□□ -1.84
PVT1-202ENST00000512617 PCDHA13Q9Y5I0 950 aa3.58□□□□□ -1.84
PVT1-202ENST00000512617 HS3ST4Q9Y661 456 aa3.58□□□□□ -1.84
PVT1-202ENST00000512617 FMN1Q68DA7 1419 aa3.58□□□□□ -1.84
PVT1-202ENST00000512617 ARHGEF40Q8TER5 1519 aa3.58□□□□□ -1.84
PVT1-202ENST00000512617 CLRN2A0PK11 232 aa3.57□□□□□ -1.84
PVT1-202ENST00000512617 CTAGE9A4FU28 777 aa3.57□□□□□ -1.84
PVT1-202ENST00000512617 CCDC151A5D8V7 595 aa3.57□□□□□ -1.84
PVT1-202ENST00000512617 MEIS1O00470 390 aa3.57□□□□□ -1.84
PVT1-202ENST00000512617 WDR46O15213 610 aaKnown RBP3.57□□□□□ -1.84
PVT1-202ENST00000512617 FANCAO15360 1455 aa3.57□□□□□ -1.84
PVT1-202ENST00000512617 CCP110O43303 1012 aa3.57□□□□□ -1.84
PVT1-202ENST00000512617 STX6O43752 255 aa3.57□□□□□ -1.84
PVT1-202ENST00000512617 TBC1D4O60343 1298 aa3.57□□□□□ -1.84
PVT1-202ENST00000512617 NEMFO60524 1076 aa3.57□□□□□ -1.84
PVT1-202ENST00000512617 PLCH2O75038 1416 aa3.57□□□□□ -1.84
PVT1-202ENST00000512617 KRT38O76015 456 aa3.57□□□□□ -1.84
PVT1-202ENST00000512617 PCF11O94913 1555 aaKnown RBP3.57□□□□□ -1.84
PVT1-202ENST00000512617 CSPG5O95196 566 aa3.57□□□□□ -1.84
PVT1-202ENST00000512617 CCNDBP1O95273 360 aa3.57□□□□□ -1.84
PVT1-202ENST00000512617 TUBB4AP04350 444 aa3.57□□□□□ -1.84
PVT1-202ENST00000512617 CTSBP07858 339 aa3.57□□□□□ -1.84
PVT1-202ENST00000512617 MAPTP10636 758 aaKnown RBP3.57□□□□□ -1.84
PVT1-202ENST00000512617 GNAT1P11488 350 aa3.57□□□□□ -1.84
PVT1-202ENST00000512617 CPB1P15086 417 aa3.57□□□□□ -1.84
PVT1-202ENST00000512617 TIMP2P16035 220 aa3.57□□□□□ -1.84
PVT1-202ENST00000512617 NPPBP16860 134 aa3.57□□□□□ -1.84
PVT1-202ENST00000512617 IL10P22301 178 aa3.57□□□□□ -1.84
PVT1-202ENST00000512617 PSMC2P35998 433 aaKnown RBP3.57□□□□□ -1.84
PVT1-202ENST00000512617 GGCXP38435 758 aa3.57□□□□□ -1.84
PVT1-202ENST00000512617 ASMTP46597 345 aa3.57□□□□□ -1.84
PVT1-202ENST00000512617 CAPZA2P47755 286 aa3.57□□□□□ -1.84
PVT1-202ENST00000512617 CARSP49589 748 aaKnown RBP3.57□□□□□ -1.84
PVT1-202ENST00000512617 HARS2P49590 506 aaKnown RBP3.57□□□□□ -1.84
PVT1-202ENST00000512617 NT5C2P49902 561 aa3.57□□□□□ -1.84
PVT1-202ENST00000512617 ARFIP1P53367 373 aa3.57□□□□□ -1.84
PVT1-202ENST00000512617 MLLT6P55198 1093 aaPredicted RBP3.57□□□□□ -1.84
PVT1-202ENST00000512617 ADAMTSL3P82987 1691 aa3.57□□□□□ -1.84
PVT1-202ENST00000512617 LSM11P83369 360 aaKnown RBP eCLIP3.57□□□□□ -1.84
PVT1-202ENST00000512617 ID3Q02535 119 aa3.57□□□□□ -1.84
PVT1-202ENST00000512617 TNP2Q05952 138 aa3.57□□□□□ -1.84
PVT1-202ENST00000512617 DDR1Q08345 913 aa3.57□□□□□ -1.84
PVT1-202ENST00000512617 FSTL1Q12841 308 aa3.57□□□□□ -1.84
PVT1-202ENST00000512617 RPA4Q13156 261 aa3.57□□□□□ -1.84
PVT1-202ENST00000512617 MMRN1Q13201 1228 aa3.57□□□□□ -1.84
PVT1-202ENST00000512617 TUSC3Q13454 348 aa3.57□□□□□ -1.84
PVT1-202ENST00000512617 SNW1Q13573 536 aaKnown RBP3.57□□□□□ -1.84
PVT1-202ENST00000512617 SLBPQ14493 270 aaKnown RBP eCLIP3.57□□□□□ -1.84
PVT1-202ENST00000512617 LBRQ14739 615 aaKnown RBP3.57□□□□□ -1.84
PVT1-202ENST00000512617 KIF14Q15058 1648 aa3.57□□□□□ -1.84
PVT1-202ENST00000512617 PPP1R7Q15435 360 aa3.57□□□□□ -1.84
PVT1-202ENST00000512617 CAVIN4Q5BKX8 364 aa3.57□□□□□ -1.84
PVT1-202ENST00000512617 KHDC1LQ5JSQ8 128 aa3.57□□□□□ -1.84
PVT1-202ENST00000512617 ZBTB41Q5SVQ8 909 aa3.57□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms