RNA–Protein interactions for RNA: ENST00000512375.1

MRPS18C-208, Transcript of mitochondrial ribosomal protein S18C, human

TSL 2

Gene MRPS18C, Length 2,482 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MRPS18C-208	ENST00000512375	BARX2	Q9UMQ3	279 aa	Predicted RBP	11.63	□□□□□ -0.55
MRPS18C-208	ENST00000512375	MANSC4	A6NHS7	340 aa	Predicted RBP	11.63	□□□□□ -0.55
MRPS18C-208	ENST00000512375	SIGLEC16	A6NMB1	481 aa		11.63	□□□□□ -0.55
MRPS18C-208	ENST00000512375	PPEF2	O14830	753 aa		11.63	□□□□□ -0.55
MRPS18C-208	ENST00000512375	SHOX2	O60902	331 aa	Predicted RBP	11.63	□□□□□ -0.55
MRPS18C-208	ENST00000512375	DARS	P14868	501 aa	Known RBP	11.63	□□□□□ -0.55
MRPS18C-208	ENST00000512375	NR1D1	P20393	614 aa		11.63	□□□□□ -0.55
MRPS18C-208	ENST00000512375	PSMA2	P25787	234 aa		11.63	□□□□□ -0.55
MRPS18C-208	ENST00000512375	CETN2	P41208	172 aa		11.63	□□□□□ -0.55
MRPS18C-208	ENST00000512375	CDC42EP1	Q00587	391 aa		11.63	□□□□□ -0.55
MRPS18C-208	ENST00000512375	INCA1	Q0VD86	236 aa		11.63	□□□□□ -0.55
MRPS18C-208	ENST00000512375	MYO1E	Q12965	1108 aa		11.63	□□□□□ -0.55
MRPS18C-208	ENST00000512375	ODF2	Q5BJF6	829 aa		11.63	□□□□□ -0.55
MRPS18C-208	ENST00000512375	SPDYC	Q5MJ68	293 aa		11.63	□□□□□ -0.55
MRPS18C-208	ENST00000512375	LRRC38	Q5VT99	294 aa		11.63	□□□□□ -0.55
MRPS18C-208	ENST00000512375	MFSD7	Q6UXD7	560 aa		11.63	□□□□□ -0.55
MRPS18C-208	ENST00000512375	XYLT1	Q86Y38	959 aa		11.63	□□□□□ -0.55
MRPS18C-208	ENST00000512375	RCOR2	Q8IZ40	523 aa		11.63	□□□□□ -0.55
MRPS18C-208	ENST00000512375	EMC1	Q8N766	993 aa		11.63	□□□□□ -0.55
MRPS18C-208	ENST00000512375	NIPA2	Q8N8Q9	360 aa		11.63	□□□□□ -0.55
MRPS18C-208	ENST00000512375	ATL2	Q8NHH9	583 aa		11.63	□□□□□ -0.55
MRPS18C-208	ENST00000512375	UBA3	Q8TBC4	463 aa		11.63	□□□□□ -0.55
MRPS18C-208	ENST00000512375	GRK7	Q8WTQ7	553 aa		11.63	□□□□□ -0.55
MRPS18C-208	ENST00000512375	TRIM6	Q9C030	488 aa	Predicted RBP	11.63	□□□□□ -0.55
MRPS18C-208	ENST00000512375	NXF3	Q9H4D5	531 aa	Known RBP	11.63	□□□□□ -0.55
MRPS18C-208	ENST00000512375	LRRC4C	Q9HCJ2	640 aa		11.63	□□□□□ -0.55
MRPS18C-208	ENST00000512375	HOMER3	Q9NSC5	361 aa		11.63	□□□□□ -0.55
MRPS18C-208	ENST00000512375	RNF19A	Q9NV58	838 aa		11.63	□□□□□ -0.55
MRPS18C-208	ENST00000512375	LCMT1	Q9UIC8	334 aa		11.63	□□□□□ -0.55
MRPS18C-208	ENST00000512375	TP73	O15350	636 aa		11.62	□□□□□ -0.55
MRPS18C-208	ENST00000512375	TREH	O43280	583 aa		11.62	□□□□□ -0.55
MRPS18C-208	ENST00000512375	STAU1	O95793	577 aa	Known RBP	11.62	□□□□□ -0.55
MRPS18C-208	ENST00000512375	MYL3	P08590	195 aa		11.62	□□□□□ -0.55
MRPS18C-208	ENST00000512375	VDR	P11473	427 aa		11.62	□□□□□ -0.55
MRPS18C-208	ENST00000512375	GPD2	P43304	727 aa		11.62	□□□□□ -0.55
MRPS18C-208	ENST00000512375	VPS41	P49754	854 aa		11.62	□□□□□ -0.55
MRPS18C-208	ENST00000512375	PSEN2	P49810	448 aa		11.62	□□□□□ -0.55
MRPS18C-208	ENST00000512375	YARS	P54577	528 aa	Known RBP	11.62	□□□□□ -0.55
MRPS18C-208	ENST00000512375	ZNF200	P98182	395 aa	Predicted RBP	11.62	□□□□□ -0.55
MRPS18C-208	ENST00000512375	IFFO1	Q0D2I5	559 aa		11.62	□□□□□ -0.55
MRPS18C-208	ENST00000512375	PDCL	Q13371	301 aa		11.62	□□□□□ -0.55
MRPS18C-208	ENST00000512375	CCNG2	Q16589	344 aa		11.62	□□□□□ -0.55
MRPS18C-208	ENST00000512375	SKIDA1	Q1XH10	827 aa		11.62	□□□□□ -0.55
MRPS18C-208	ENST00000512375	KRT71	Q3SY84	523 aa		11.62	□□□□□ -0.55
MRPS18C-208	ENST00000512375	APBB1IP	Q7Z5R6	666 aa	Predicted RBP	11.62	□□□□□ -0.55
MRPS18C-208	ENST00000512375	TMEM40	Q8WWA1	233 aa		11.62	□□□□□ -0.55
MRPS18C-208	ENST00000512375	RAPGEF5	Q92565	580 aa		11.62	□□□□□ -0.55
MRPS18C-208	ENST00000512375	SNX27	Q96L92	541 aa		11.62	□□□□□ -0.55
MRPS18C-208	ENST00000512375	APOL6	Q9BWW8	343 aa		11.62	□□□□□ -0.55
MRPS18C-208	ENST00000512375	SEMA4A	Q9H3S1	761 aa		11.62	□□□□□ -0.55
MRPS18C-208	ENST00000512375	PLEKHA5	Q9HAU0	1116 aa		11.62	□□□□□ -0.55
MRPS18C-208	ENST00000512375	METTL5	Q9NRN9	209 aa	Known RBP	11.62	□□□□□ -0.55
MRPS18C-208	ENST00000512375	BCCIP	Q9P287	314 aa	Known RBP eCLIP	11.62	□□□□□ -0.55
MRPS18C-208	ENST00000512375	TUBGCP4	Q9UGJ1	667 aa		11.62	□□□□□ -0.55
MRPS18C-208	ENST00000512375	FEZ2	Q9UHY8	353 aa	Predicted RBP	11.62	□□□□□ -0.55
MRPS18C-208	ENST00000512375	RALGAPA2	Q2PPJ7	1873 aa		11.62	□□□□□ -0.55
MRPS18C-208	ENST00000512375	TRPM7	Q96QT4	1865 aa		11.62	□□□□□ -0.55
MRPS18C-208	ENST00000512375	CEP350	Q5VT06	3117 aa		11.62	□□□□□ -0.55
MRPS18C-208	ENST00000512375	LRRD1	A4D1F6	860 aa		11.62	□□□□□ -0.55
MRPS18C-208	ENST00000512375	HMGCR	P04035	888 aa		11.62	□□□□□ -0.55
MRPS18C-208	ENST00000512375	CPT1A	P50416	773 aa		11.62	□□□□□ -0.55
MRPS18C-208	ENST00000512375	HNRNPH2	P55795	449 aa	Known RBP	11.62	□□□□□ -0.55
MRPS18C-208	ENST00000512375	ADAM17	P78536	824 aa		11.62	□□□□□ -0.55
MRPS18C-208	ENST00000512375	SKOR1	P84550	965 aa		11.62	□□□□□ -0.55
MRPS18C-208	ENST00000512375	IRF5	Q13568	498 aa		11.62	□□□□□ -0.55
MRPS18C-208	ENST00000512375	PTK6	Q13882	451 aa		11.62	□□□□□ -0.55
MRPS18C-208	ENST00000512375	CNGA2	Q16280	664 aa		11.62	□□□□□ -0.55
MRPS18C-208	ENST00000512375	DENND2C	Q68D51	928 aa		11.62	□□□□□ -0.55
MRPS18C-208	ENST00000512375	C17orf99	Q6UX52	265 aa		11.62	□□□□□ -0.55
MRPS18C-208	ENST00000512375	LRRC31	Q6UY01	552 aa		11.62	□□□□□ -0.55
MRPS18C-208	ENST00000512375	KDM7A	Q6ZMT4	941 aa		11.62	□□□□□ -0.55
MRPS18C-208	ENST00000512375	CCDC25	Q86WR0	208 aa		11.62	□□□□□ -0.55
MRPS18C-208	ENST00000512375	USP6NL	Q92738	828 aa		11.62	□□□□□ -0.55
MRPS18C-208	ENST00000512375	SNF8	Q96H20	258 aa		11.62	□□□□□ -0.55
MRPS18C-208	ENST00000512375	NT5C1A	Q9BXI3	368 aa		11.62	□□□□□ -0.55
MRPS18C-208	ENST00000512375	WHRN	Q9P202	907 aa		11.62	□□□□□ -0.55
MRPS18C-208	ENST00000512375	WDR35	Q9P2L0	1181 aa		11.62	□□□□□ -0.55
MRPS18C-208	ENST00000512375	PIN4	Q9Y237	131 aa	Known RBP	11.62	□□□□□ -0.55
MRPS18C-208	ENST00000512375	SNX9	Q9Y5X1	595 aa		11.62	□□□□□ -0.55
MRPS18C-208	ENST00000512375	LRCH4	O75427	683 aa		11.61	□□□□□ -0.55
MRPS18C-208	ENST00000512375	RECQL4	O94761	1208 aa		11.61	□□□□□ -0.55
MRPS18C-208	ENST00000512375	SHBG	P04278	402 aa		11.61	□□□□□ -0.55
MRPS18C-208	ENST00000512375	AKAP5	P24588	427 aa		11.61	□□□□□ -0.55
MRPS18C-208	ENST00000512375	IVD	P26440	423 aa		11.61	□□□□□ -0.55
MRPS18C-208	ENST00000512375	HPD	P32754	393 aa	Predicted RBP	11.61	□□□□□ -0.55
MRPS18C-208	ENST00000512375	RGS2	P41220	211 aa		11.61	□□□□□ -0.55
MRPS18C-208	ENST00000512375	IRAK1	P51617	712 aa		11.61	□□□□□ -0.55
MRPS18C-208	ENST00000512375	GNGT1	P63211	74 aa		11.61	□□□□□ -0.55
MRPS18C-208	ENST00000512375	SLC29A2	Q14542	456 aa		11.61	□□□□□ -0.55
MRPS18C-208	ENST00000512375	SNX17	Q15036	470 aa		11.61	□□□□□ -0.55
MRPS18C-208	ENST00000512375	SMTNL2	Q2TAL5	461 aa		11.61	□□□□□ -0.55
MRPS18C-208	ENST00000512375	UBAP2	Q5T6F2	1119 aa	Known RBP	11.61	□□□□□ -0.55
MRPS18C-208	ENST00000512375	SPOCD1	Q6ZMY3	1216 aa		11.61	□□□□□ -0.55
MRPS18C-208	ENST00000512375	SYDE1	Q6ZW31	735 aa	Predicted RBP	11.61	□□□□□ -0.55
MRPS18C-208	ENST00000512375	C12orf29	Q8N999	325 aa		11.61	□□□□□ -0.55
MRPS18C-208	ENST00000512375	C18orf25	Q96B23	403 aa	Predicted RBP	11.61	□□□□□ -0.55
MRPS18C-208	ENST00000512375	AP5M1	Q9H0R1	490 aa		11.61	□□□□□ -0.55
MRPS18C-208	ENST00000512375	TSPAN16	Q9UKR8	245 aa		11.61	□□□□□ -0.55
MRPS18C-208	ENST00000512375	HAS3	O00219	553 aa		11.61	□□□□□ -0.55
MRPS18C-208	ENST00000512375	PIK3R2	O00459	728 aa		11.61	□□□□□ -0.55

Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms