RNA–Protein interactions for RNA: ENST00000512334.5

DDX41-214, Transcript of DEAD-box helicase 41, humanhuman

TSL 2

Gene DDX41, Length 686 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-214ENST00000512334 ATP2C2O75185 946 aa17.01■□□□□ 0.31
DDX41-214ENST00000512334 HAPLN1P10915 354 aaPredicted RBP17.01■□□□□ 0.31
DDX41-214ENST00000512334 CEBPBP17676 345 aa17.01■□□□□ 0.31
DDX41-214ENST00000512334 RAP1GAPP47736 663 aa17.01■□□□□ 0.31
DDX41-214ENST00000512334 TAF12Q16514 161 aa17.01■□□□□ 0.31
DDX41-214ENST00000512334 CCDC142Q17RM4 750 aa17.01■□□□□ 0.31
DDX41-214ENST00000512334 NPAS3Q8IXF0 933 aa17.01■□□□□ 0.31
DDX41-214ENST00000512334 TRIML1Q8N9V2 468 aa17.01■□□□□ 0.31
DDX41-214ENST00000512334 LEMD2Q8NC56 503 aa17.01■□□□□ 0.31
DDX41-214ENST00000512334 CCDC150Q8NCX0 1101 aa17.01■□□□□ 0.31
DDX41-214ENST00000512334 GIPC2Q8TF65 315 aa17.01■□□□□ 0.31
DDX41-214ENST00000512334 RSAD2Q8WXG1 361 aa17.01■□□□□ 0.31
DDX41-214ENST00000512334 PSMG2Q969U7 264 aa17.01■□□□□ 0.31
DDX41-214ENST00000512334 MCRS1Q96EZ8 462 aa17.01■□□□□ 0.31
DDX41-214ENST00000512334 CLSTN2Q9H4D0 955 aa17.01■□□□□ 0.31
DDX41-214ENST00000512334 VRTNQ9H8Y1 702 aa17.01■□□□□ 0.31
DDX41-214ENST00000512334 TMEM8AQ9HCN3 771 aa17.01■□□□□ 0.31
DDX41-214ENST00000512334 AVENQ9NQS1 362 aaPredicted RBP17.01■□□□□ 0.31
DDX41-214ENST00000512334 LMBRD1Q9NUN5 540 aa17.01■□□□□ 0.31
DDX41-214ENST00000512334 ASB3Q9Y575 518 aa17.01■□□□□ 0.31
DDX41-214ENST00000512334 A8MXQ7 604 aa17■□□□□ 0.31
DDX41-214ENST00000512334 STX10O60499 249 aa17■□□□□ 0.31
DDX41-214ENST00000512334 FAM163BP0C2L3 166 aa17■□□□□ 0.31
DDX41-214ENST00000512334 ATF6P18850 670 aa17■□□□□ 0.31
DDX41-214ENST00000512334 CYP2F1P24903 491 aa17■□□□□ 0.31
DDX41-214ENST00000512334 CCR2P41597 374 aa17■□□□□ 0.31
DDX41-214ENST00000512334 MXI1P50539 228 aa17■□□□□ 0.31
DDX41-214ENST00000512334 CDH8P55286 799 aa17■□□□□ 0.31
DDX41-214ENST00000512334 STX17P56962 302 aa17■□□□□ 0.31
DDX41-214ENST00000512334 PAK1Q13153 545 aa17■□□□□ 0.31
DDX41-214ENST00000512334 TDGQ13569 410 aa17■□□□□ 0.31
DDX41-214ENST00000512334 MAPRE1Q15691 268 aaKnown RBP17■□□□□ 0.31
DDX41-214ENST00000512334 CCDC40Q4G0X9 1142 aa17■□□□□ 0.31
DDX41-214ENST00000512334 PRSS36Q5K4E3 855 aa17■□□□□ 0.31
DDX41-214ENST00000512334 KRT39Q6A163 491 aa17■□□□□ 0.31
DDX41-214ENST00000512334 SPOPLQ6IQ16 392 aa17■□□□□ 0.31
DDX41-214ENST00000512334 C4orf50Q6ZRC1 276 aa17■□□□□ 0.31
DDX41-214ENST00000512334 TRIM67Q6ZTA4 783 aa17■□□□□ 0.31
DDX41-214ENST00000512334 DNAJB7Q7Z6W7 309 aaPredicted RBP17■□□□□ 0.31
DDX41-214ENST00000512334 ZC3H3Q8IXZ2 948 aaKnown RBP17■□□□□ 0.31
DDX41-214ENST00000512334 UBALD2Q8IYN6 164 aa17■□□□□ 0.31
DDX41-214ENST00000512334 GPR152Q8TDT2 470 aa17■□□□□ 0.31
DDX41-214ENST00000512334 TAS1R2Q8TE23 839 aa17■□□□□ 0.31
DDX41-214ENST00000512334 TAF4BQ92750 862 aa17■□□□□ 0.31
DDX41-214ENST00000512334 PKMYT1Q99640 499 aa17■□□□□ 0.31
DDX41-214ENST00000512334 NUP62CLQ9H1M0 184 aa17■□□□□ 0.31
DDX41-214ENST00000512334 SMOC2Q9H3U7 446 aa17■□□□□ 0.31
DDX41-214ENST00000512334 C11orf16Q9NQ32 467 aa17■□□□□ 0.31
DDX41-214ENST00000512334 GPR37L1O60883 481 aa16.99■□□□□ 0.31
DDX41-214ENST00000512334 ASS1P00966 412 aaKnown RBP16.99■□□□□ 0.31
DDX41-214ENST00000512334 GJA1P17302 382 aa16.99■□□□□ 0.31
DDX41-214ENST00000512334 GTF2H1P32780 548 aa16.99■□□□□ 0.31
DDX41-214ENST00000512334 GPR15P49685 360 aa16.99■□□□□ 0.31
DDX41-214ENST00000512334 CYP27A1Q02318 531 aa16.99■□□□□ 0.31
DDX41-214ENST00000512334 MDH1BQ5I0G3 518 aa16.99■□□□□ 0.31
DDX41-214ENST00000512334 TTI2Q6NXR4 508 aa16.99■□□□□ 0.31
DDX41-214ENST00000512334 FAM171BQ6P995 826 aa16.99■□□□□ 0.31
DDX41-214ENST00000512334 PARM1Q6UWI2 310 aa16.99■□□□□ 0.31
DDX41-214ENST00000512334 MTSS1LQ765P7 747 aa16.99■□□□□ 0.31
DDX41-214ENST00000512334 NXPE3Q969Y0 559 aa16.99■□□□□ 0.31
DDX41-214ENST00000512334 MYLPFQ96A32 169 aa16.99■□□□□ 0.31
DDX41-214ENST00000512334 CEP63Q96MT8 703 aa16.99■□□□□ 0.31
DDX41-214ENST00000512334 DUSP9Q99956 384 aaKnown RBP16.99■□□□□ 0.31
DDX41-214ENST00000512334 DPEP3Q9H4B8 488 aa16.99■□□□□ 0.31
DDX41-214ENST00000512334 SLITRK6Q9H5Y7 841 aa16.99■□□□□ 0.31
DDX41-214ENST00000512334 ABCB6Q9NP58 842 aa16.99■□□□□ 0.31
DDX41-214ENST00000512334 CRTAC1Q9NQ79 661 aa16.99■□□□□ 0.31
DDX41-214ENST00000512334 GDE1Q9NZC3 331 aa16.99■□□□□ 0.31
DDX41-214ENST00000512334 MAGEC2Q9UBF1 373 aaPredicted RBP16.99■□□□□ 0.31
DDX41-214ENST00000512334 ARMCX3Q9UH62 379 aaPredicted RBP16.99■□□□□ 0.31
DDX41-214ENST00000512334 NUMBLQ9Y6R0 609 aa16.99■□□□□ 0.31
DDX41-214ENST00000512334 A0A1W2PRU2 124 aa16.98■□□□□ 0.31
DDX41-214ENST00000512334 EPHA5P54756 1037 aa16.98■□□□□ 0.31
DDX41-214ENST00000512334 RPL10AP62906 217 aaKnown RBP16.98■□□□□ 0.31
DDX41-214ENST00000512334 NOP14P78316 857 aaKnown RBP16.98■□□□□ 0.31
DDX41-214ENST00000512334 SIGLEC14Q08ET2 396 aa16.98■□□□□ 0.31
DDX41-214ENST00000512334 HTR4Q13639 388 aa16.98■□□□□ 0.31
DDX41-214ENST00000512334 TEAD2Q15562 447 aa16.98■□□□□ 0.31
DDX41-214ENST00000512334 DDR2Q16832 855 aa16.98■□□□□ 0.31
DDX41-214ENST00000512334 SDHAF4Q5VUM1 108 aa16.98■□□□□ 0.31
DDX41-214ENST00000512334 TMC8Q8IU68 726 aa16.98■□□□□ 0.31
DDX41-214ENST00000512334 SCN4BQ8IWT1 228 aa16.98■□□□□ 0.31
DDX41-214ENST00000512334 MYCBPAPQ8TBZ2 947 aa16.98■□□□□ 0.31
DDX41-214ENST00000512334 FGF14Q92915 247 aa16.98■□□□□ 0.31
DDX41-214ENST00000512334 FUBP3Q96I24 572 aaKnown RBP eCLIP16.98■□□□□ 0.31
DDX41-214ENST00000512334 LRFN3Q9BTN0 628 aa16.98■□□□□ 0.31
DDX41-214ENST00000512334 SDCBP2Q9H190 292 aa16.98■□□□□ 0.31
DDX41-214ENST00000512334 METTL14Q9HCE5 456 aaKnown RBP16.98■□□□□ 0.31
DDX41-214ENST00000512334 ZNF334Q9HCZ1 680 aaPredicted RBP16.98■□□□□ 0.31
DDX41-214ENST00000512334 NME7Q9Y5B8 376 aa16.98■□□□□ 0.31
DDX41-214ENST00000512334 TMEM221A6NGB7 291 aa16.97■□□□□ 0.31
DDX41-214ENST00000512334 PRR33A8MZF0 331 aa16.97■□□□□ 0.31
DDX41-214ENST00000512334 ANHXE9PGG2 379 aa16.97■□□□□ 0.31
DDX41-214ENST00000512334 M0R296 226 aa16.97■□□□□ 0.31
DDX41-214ENST00000512334 NRG2O14511 850 aaPredicted RBP16.97■□□□□ 0.31
DDX41-214ENST00000512334 MICAL2O94851 1124 aa16.97■□□□□ 0.31
DDX41-214ENST00000512334 FGF19O95750 216 aa16.97■□□□□ 0.31
DDX41-214ENST00000512334 PTPN1P18031 435 aaKnown RBP16.97■□□□□ 0.31
DDX41-214ENST00000512334 BDNFP23560 247 aa16.97■□□□□ 0.31
DDX41-214ENST00000512334 GABRR2P28476 465 aa16.97■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms