RNA–Protein interactions for RNA: ENST00000510906.5

PDPN-209, Transcript of podoplanin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PDPN, Length 786 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-209ENST00000510906 LARP7Q4G0J3 582 aaKnown RBP eCLIP9.35□□□□□ -0.91
PDPN-209ENST00000510906 PDXDC1Q6P996 788 aa9.35□□□□□ -0.91
PDPN-209ENST00000510906 CYP26C1Q6V0L0 522 aa9.35□□□□□ -0.91
PDPN-209ENST00000510906 RIPOR1Q6ZS17 1223 aa9.35□□□□□ -0.91
PDPN-209ENST00000510906 OTOP3Q7RTS5 596 aa9.35□□□□□ -0.91
PDPN-209ENST00000510906 BMP8AQ7Z5Y6 402 aa9.35□□□□□ -0.91
PDPN-209ENST00000510906 MAP4K3Q8IVH8 894 aa9.35□□□□□ -0.91
PDPN-209ENST00000510906 HSCBQ8IWL3 235 aa9.35□□□□□ -0.91
PDPN-209ENST00000510906 GALNT12Q8IXK2 581 aa9.35□□□□□ -0.91
PDPN-209ENST00000510906 C1orf127Q8N9H9 656 aa9.35□□□□□ -0.91
PDPN-209ENST00000510906 LINC00301Q8NCQ3 95 aa9.35□□□□□ -0.91
PDPN-209ENST00000510906 ACSF2Q96CM8 615 aaPredicted RBP9.35□□□□□ -0.91
PDPN-209ENST00000510906 DNAJC19Q96DA6 116 aa9.35□□□□□ -0.91
PDPN-209ENST00000510906 ASIC4Q96FT7 647 aa9.35□□□□□ -0.91
PDPN-209ENST00000510906 CRELD1Q96HD1 420 aa9.35□□□□□ -0.91
PDPN-209ENST00000510906 RHOBTB2Q9BYZ6 727 aa9.35□□□□□ -0.91
PDPN-209ENST00000510906 PIDD1Q9HB75 910 aa9.35□□□□□ -0.91
PDPN-209ENST00000510906 WDR6Q9NNW5 1121 aaKnown RBP9.35□□□□□ -0.91
PDPN-209ENST00000510906 ZDHHC7Q9NXF8 308 aa9.35□□□□□ -0.91
PDPN-209ENST00000510906 VTI1BQ9UEU0 232 aa9.35□□□□□ -0.91
PDPN-209ENST00000510906 SORCS3Q9UPU3 1222 aa9.35□□□□□ -0.91
PDPN-209ENST00000510906 NUB1Q9Y5A7 615 aa9.35□□□□□ -0.91
PDPN-209ENST00000510906 CDY1Q9Y6F8 540 aa9.35□□□□□ -0.91
PDPN-209ENST00000510906 MORC2Q9Y6X9 1032 aaPredicted RBP9.35□□□□□ -0.91
PDPN-209ENST00000510906 DCDC2BA2VCK2 349 aa9.34□□□□□ -0.91
PDPN-209ENST00000510906 LACTBL1A8MY62 500 aa9.34□□□□□ -0.91
PDPN-209ENST00000510906 GIPC1O14908 333 aa9.34□□□□□ -0.91
PDPN-209ENST00000510906 OGTO15294 1046 aa9.34□□□□□ -0.91
PDPN-209ENST00000510906 BNIP3LO60238 219 aa9.34□□□□□ -0.91
PDPN-209ENST00000510906 PDGFBP01127 241 aaPredicted RBP9.34□□□□□ -0.91
PDPN-209ENST00000510906 SCP2P22307 547 aa9.34□□□□□ -0.91
PDPN-209ENST00000510906 GBP2P32456 591 aaPredicted RBP9.34□□□□□ -0.91
PDPN-209ENST00000510906 RPL9P32969 192 aaKnown RBP9.34□□□□□ -0.91
PDPN-209ENST00000510906 STAT6P42226 847 aa9.34□□□□□ -0.91
PDPN-209ENST00000510906 GUCY2FP51841 1108 aa9.34□□□□□ -0.91
PDPN-209ENST00000510906 NTHL1P78549 312 aa9.34□□□□□ -0.91
PDPN-209ENST00000510906 PPP2R3AQ06190 1150 aa9.34□□□□□ -0.91
PDPN-209ENST00000510906 CCINQ13939 588 aa9.34□□□□□ -0.91
PDPN-209ENST00000510906 PPM1LQ5SGD2 360 aa9.34□□□□□ -0.91
PDPN-209ENST00000510906 LIN9Q5TKA1 542 aa9.34□□□□□ -0.91
PDPN-209ENST00000510906 CCDC73Q6ZRK6 1079 aa9.34□□□□□ -0.91
PDPN-209ENST00000510906 ANKS3Q6ZW76 656 aa9.34□□□□□ -0.91
PDPN-209ENST00000510906 SV2BQ7L1I2 683 aa9.34□□□□□ -0.91
PDPN-209ENST00000510906 PDILTQ8N807 584 aa9.34□□□□□ -0.91
PDPN-209ENST00000510906 SLC7A14Q8TBB6 771 aa9.34□□□□□ -0.91
PDPN-209ENST00000510906 EPS8L3Q8TE67 593 aaKnown RBP9.34□□□□□ -0.91
PDPN-209ENST00000510906 ZNF837Q96EG3 531 aaPredicted RBP9.34□□□□□ -0.91
PDPN-209ENST00000510906 MFSD14AQ96MC6 490 aa9.34□□□□□ -0.91
PDPN-209ENST00000510906 MYADMQ96S97 322 aa9.34□□□□□ -0.91
PDPN-209ENST00000510906 MSTO1Q9BUK6 570 aa9.34□□□□□ -0.91
PDPN-209ENST00000510906 PLEKHA5Q9HAU0 1116 aa9.34□□□□□ -0.91
PDPN-209ENST00000510906 TBC1D7Q9P0N9 293 aa9.34□□□□□ -0.91
PDPN-209ENST00000510906 BACE2Q9Y5Z0 518 aa9.34□□□□□ -0.91
PDPN-209ENST00000510906 PLXNA3P51805 1871 aa9.34□□□□□ -0.91
PDPN-209ENST00000510906 PPEF2O14830 753 aa9.33□□□□□ -0.92
PDPN-209ENST00000510906 EREGO14944 169 aa9.33□□□□□ -0.92
PDPN-209ENST00000510906 SYN3O14994 580 aa9.33□□□□□ -0.92
PDPN-209ENST00000510906 KHNYNO15037 678 aaKnown RBP9.33□□□□□ -0.92
PDPN-209ENST00000510906 SPTLC2O15270 562 aa9.33□□□□□ -0.92
PDPN-209ENST00000510906 CCL16O15467 120 aa9.33□□□□□ -0.92
PDPN-209ENST00000510906 TBC1D4O60343 1298 aa9.33□□□□□ -0.92
PDPN-209ENST00000510906 HSP90AA1P07900 732 aaKnown RBP9.33□□□□□ -0.92
PDPN-209ENST00000510906 HNRNPA1P09651 372 aaKnown RBP eCLIP9.33□□□□□ -0.92
PDPN-209ENST00000510906 IDEP14735 1019 aa9.33□□□□□ -0.92
PDPN-209ENST00000510906 MCM4P33991 863 aa9.33□□□□□ -0.92
PDPN-209ENST00000510906 ACOT2P49753 483 aa9.33□□□□□ -0.92
PDPN-209ENST00000510906 ARPP19P56211 112 aa9.33□□□□□ -0.92
PDPN-209ENST00000510906 ROR1Q01973 937 aa9.33□□□□□ -0.92
PDPN-209ENST00000510906 PKP1Q13835 747 aa9.33□□□□□ -0.92
PDPN-209ENST00000510906 ZBTB6Q15916 424 aa9.33□□□□□ -0.92
PDPN-209ENST00000510906 KYAT1Q16773 422 aa9.33□□□□□ -0.92
PDPN-209ENST00000510906 FOXD4L6Q3SYB3 417 aaPredicted RBP9.33□□□□□ -0.92
PDPN-209ENST00000510906 AXDND1Q5T1B0 1012 aaPredicted RBP9.33□□□□□ -0.92
PDPN-209ENST00000510906 ADALQ6DHV7 355 aa9.33□□□□□ -0.92
PDPN-209ENST00000510906 SLC8B1Q6J4K2 584 aa9.33□□□□□ -0.92
PDPN-209ENST00000510906 FOXD4L3Q6VB84 417 aaPredicted RBP9.33□□□□□ -0.92
PDPN-209ENST00000510906 GET4Q7L5D6 327 aaPredicted RBP9.33□□□□□ -0.92
PDPN-209ENST00000510906 ZNF720Q7Z2F6 126 aa9.33□□□□□ -0.92
PDPN-209ENST00000510906 GRASPQ7Z6J2 395 aaPredicted RBP9.33□□□□□ -0.92
PDPN-209ENST00000510906 UBALD2Q8IYN6 164 aa9.33□□□□□ -0.92
PDPN-209ENST00000510906 FBXL6Q8N531 539 aa9.33□□□□□ -0.92
PDPN-209ENST00000510906 RSAD2Q8WXG1 361 aa9.33□□□□□ -0.92
PDPN-209ENST00000510906 STAMQ92783 540 aa9.33□□□□□ -0.92
PDPN-209ENST00000510906 PMEPA1Q969W9 287 aa9.33□□□□□ -0.92
PDPN-209ENST00000510906 ZNF396Q96N95 335 aaPredicted RBP9.33□□□□□ -0.92
PDPN-209ENST00000510906 STRA6Q9BX79 667 aa9.33□□□□□ -0.92
PDPN-209ENST00000510906 FGFBP2Q9BYJ0 223 aa9.33□□□□□ -0.92
PDPN-209ENST00000510906 ST6GALNAC4Q9H4F1 302 aa9.33□□□□□ -0.92
PDPN-209ENST00000510906 C12orf49Q9H741 205 aa9.33□□□□□ -0.92
PDPN-209ENST00000510906 MRPL44Q9H9J2 332 aaKnown RBP9.33□□□□□ -0.92
PDPN-209ENST00000510906 RPF1Q9H9Y2 349 aaKnown RBP9.33□□□□□ -0.92
PDPN-209ENST00000510906 KCNK12Q9HB15 430 aa9.33□□□□□ -0.92
PDPN-209ENST00000510906 NPHS2Q9NP85 383 aa9.33□□□□□ -0.92
PDPN-209ENST00000510906 METTL5Q9NRN9 209 aaKnown RBP9.33□□□□□ -0.92
PDPN-209ENST00000510906 SEL1LQ9UBV2 794 aa9.33□□□□□ -0.92
PDPN-209ENST00000510906 CPSF3Q9UKF6 684 aaKnown RBP9.33□□□□□ -0.92
PDPN-209ENST00000510906 UBQLN1Q9UMX0 589 aaKnown RBP9.33□□□□□ -0.92
PDPN-209ENST00000510906 WDR27A2RRH5 827 aa9.32□□□□□ -0.92
PDPN-209ENST00000510906 PPP6R2O75170 966 aa9.32□□□□□ -0.92
PDPN-209ENST00000510906 YEATS4O95619 227 aa9.32□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms