RNA–Protein interactions for RNA: ENST00000510866.5

KDM3B-207, Transcript of lysine demethylase 3B, humanhuman

TSL 1 (best)

Gene KDM3B, Length 6,324 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM3B-207ENST00000510866 MS4A14Q96JA4 679 aa7.49□□□□□ -1.21
KDM3B-207ENST00000510866 FAM118BQ9BPY3 351 aa7.49□□□□□ -1.21
KDM3B-207ENST00000510866 CENPKQ9BS16 269 aa7.49□□□□□ -1.21
KDM3B-207ENST00000510866 STAU2Q9NUL3 570 aaKnown RBP eCLIP7.49□□□□□ -1.21
KDM3B-207ENST00000510866 CYP39A1Q9NYL5 469 aa7.49□□□□□ -1.21
KDM3B-207ENST00000510866 SLC12A8A0AV02 714 aa7.49□□□□□ -1.21
KDM3B-207ENST00000510866 ATP8B1O43520 1251 aa7.49□□□□□ -1.21
KDM3B-207ENST00000510866 HIST1H2AGP0C0S8 130 aaPredicted RBP7.49□□□□□ -1.21
KDM3B-207ENST00000510866 PRKAR2AP13861 404 aaKnown RBP7.49□□□□□ -1.21
KDM3B-207ENST00000510866 HIST1H2ADP20671 130 aa7.49□□□□□ -1.21
KDM3B-207ENST00000510866 COMTP21964 271 aa7.49□□□□□ -1.21
KDM3B-207ENST00000510866 PON1P27169 355 aa7.49□□□□□ -1.21
KDM3B-207ENST00000510866 POLD3Q15054 466 aaPredicted RBP7.49□□□□□ -1.21
KDM3B-207ENST00000510866 OVOS1Q6IE37 1185 aa7.49□□□□□ -1.21
KDM3B-207ENST00000510866 DDI1Q8WTU0 396 aa7.49□□□□□ -1.21
KDM3B-207ENST00000510866 HIST1H2AHQ96KK5 128 aa7.49□□□□□ -1.21
KDM3B-207ENST00000510866 HIST1H2AJQ99878 128 aa7.49□□□□□ -1.21
KDM3B-207ENST00000510866 H2AFJQ9BTM1 129 aa7.49□□□□□ -1.21
KDM3B-207ENST00000510866 CASS4Q9NQ75 786 aa7.49□□□□□ -1.21
KDM3B-207ENST00000510866 CHST12Q9NRB3 414 aa7.49□□□□□ -1.21
KDM3B-207ENST00000510866 ARHGEF38Q9NXL2 777 aa7.49□□□□□ -1.21
KDM3B-207ENST00000510866 AIPL1Q9NZN9 384 aa7.49□□□□□ -1.21
KDM3B-207ENST00000510866 KIAA1257Q9ULG3 409 aa7.49□□□□□ -1.21
KDM3B-207ENST00000510866 ZNF197O14709 1029 aa7.49□□□□□ -1.21
KDM3B-207ENST00000510866 MAPK13O15264 365 aa7.49□□□□□ -1.21
KDM3B-207ENST00000510866 PHF2O75151 1096 aa7.49□□□□□ -1.21
KDM3B-207ENST00000510866 MMEP08473 750 aa7.49□□□□□ -1.21
KDM3B-207ENST00000510866 UBA1P22314 1058 aaKnown RBP7.49□□□□□ -1.21
KDM3B-207ENST00000510866 PHEXP78562 749 aa7.49□□□□□ -1.21
KDM3B-207ENST00000510866 PTK2BQ14289 1009 aa7.49□□□□□ -1.21
KDM3B-207ENST00000510866 SYDE1Q6ZW31 735 aaPredicted RBP7.49□□□□□ -1.21
KDM3B-207ENST00000510866 WDR75Q8IWA0 830 aaKnown RBP7.49□□□□□ -1.21
KDM3B-207ENST00000510866 SCFD1Q8WVM8 642 aa7.49□□□□□ -1.21
KDM3B-207ENST00000510866 KRT35Q92764 455 aa7.49□□□□□ -1.21
KDM3B-207ENST00000510866 PCDHB5Q9Y5E4 795 aa7.49□□□□□ -1.21
KDM3B-207ENST00000510866 SIGLEC1Q9BZZ2 1709 aa7.49□□□□□ -1.21
KDM3B-207ENST00000510866 A0A0G2JND7 137 aa7.48□□□□□ -1.21
KDM3B-207ENST00000510866 SLITRK3O94933 977 aa7.48□□□□□ -1.21
KDM3B-207ENST00000510866 SMIM10L2AP0DMW4 78 aa7.48□□□□□ -1.21
KDM3B-207ENST00000510866 SMIM10L2BP0DMW5 78 aa7.48□□□□□ -1.21
KDM3B-207ENST00000510866 SFSWAPQ12872 951 aaKnown RBP7.48□□□□□ -1.21
KDM3B-207ENST00000510866 IFT88Q13099 833 aa7.48□□□□□ -1.21
KDM3B-207ENST00000510866 CAPRIN1Q14444 709 aaKnown RBP7.48□□□□□ -1.21
KDM3B-207ENST00000510866 ZSCAN26Q16670 478 aa7.48□□□□□ -1.21
KDM3B-207ENST00000510866 LRRC23Q53EV4 343 aaPredicted RBP7.48□□□□□ -1.21
KDM3B-207ENST00000510866 FAM133BQ5BKY9 247 aaKnown RBP7.48□□□□□ -1.21
KDM3B-207ENST00000510866 DDIASQ8IXT1 998 aa7.48□□□□□ -1.21
KDM3B-207ENST00000510866 SPATA18Q8TC71 538 aa7.48□□□□□ -1.21
KDM3B-207ENST00000510866 PTPRN2Q92932 1015 aa7.48□□□□□ -1.21
KDM3B-207ENST00000510866 ADAM2Q99965 735 aa7.48□□□□□ -1.21
KDM3B-207ENST00000510866 AMACRQ9UHK6 382 aa7.48□□□□□ -1.21
KDM3B-207ENST00000510866 USP27XA6NNY8 438 aa7.48□□□□□ -1.21
KDM3B-207ENST00000510866 RNASEH1O60930 286 aaKnown RBP7.48□□□□□ -1.21
KDM3B-207ENST00000510866 TMEM253P0C7T8 217 aa7.48□□□□□ -1.21
KDM3B-207ENST00000510866 WEE1P30291 646 aa7.48□□□□□ -1.21
KDM3B-207ENST00000510866 NUMBP49757 651 aa7.48□□□□□ -1.21
KDM3B-207ENST00000510866 NTRK3Q16288 839 aa7.48□□□□□ -1.21
KDM3B-207ENST00000510866 CRY2Q49AN0 593 aa7.48□□□□□ -1.21
KDM3B-207ENST00000510866 ZRANB3Q5FWF4 1079 aa7.48□□□□□ -1.21
KDM3B-207ENST00000510866 ELOA2Q8IYF1 753 aaPredicted RBP7.48□□□□□ -1.21
KDM3B-207ENST00000510866 HS6ST3Q8IZP7 471 aa7.48□□□□□ -1.21
KDM3B-207ENST00000510866 ANKS1AQ92625 1134 aa7.48□□□□□ -1.21
KDM3B-207ENST00000510866 MKL1Q969V6 931 aa7.48□□□□□ -1.21
KDM3B-207ENST00000510866 TMEM176AQ96HP8 235 aa7.48□□□□□ -1.21
KDM3B-207ENST00000510866 PURBQ96QR8 312 aaKnown RBP7.48□□□□□ -1.21
KDM3B-207ENST00000510866 WDR18Q9BV38 432 aa7.48□□□□□ -1.21
KDM3B-207ENST00000510866 Q9H521 79 aa7.48□□□□□ -1.21
KDM3B-207ENST00000510866 TAF1DQ9H5J8 278 aaPredicted RBP7.48□□□□□ -1.21
KDM3B-207ENST00000510866 TLR8Q9NR97 1041 aaKnown RBP7.48□□□□□ -1.21
KDM3B-207ENST00000510866 EPB41L3Q9Y2J2 1087 aaPredicted RBP7.48□□□□□ -1.21
KDM3B-207ENST00000510866 PKP3Q9Y446 797 aa7.48□□□□□ -1.21
KDM3B-207ENST00000510866 FXR1P51114 621 aaKnown RBP eCLIP7.48□□□□□ -1.21
KDM3B-207ENST00000510866 KPNA1P52294 538 aaPredicted RBP7.48□□□□□ -1.21
KDM3B-207ENST00000510866 PPM1LQ5SGD2 360 aa7.48□□□□□ -1.21
KDM3B-207ENST00000510866 MEI1Q5TIA1 1274 aa7.48□□□□□ -1.21
KDM3B-207ENST00000510866 ARMC6Q6NXE6 501 aa7.48□□□□□ -1.21
KDM3B-207ENST00000510866 TMC2Q8TDI7 906 aa7.48□□□□□ -1.21
KDM3B-207ENST00000510866 GIPC2Q8TF65 315 aa7.48□□□□□ -1.21
KDM3B-207ENST00000510866 PGLYRP2Q96PD5 576 aa7.48□□□□□ -1.21
KDM3B-207ENST00000510866 ANLNQ9NQW6 1124 aa7.48□□□□□ -1.21
KDM3B-207ENST00000510866 SPATS2LQ9NUQ6 558 aaKnown RBP7.48□□□□□ -1.21
KDM3B-207ENST00000510866 ADGRB2O60241 1585 aa7.48□□□□□ -1.21
KDM3B-207ENST00000510866 ZNF185O15231 689 aa7.48□□□□□ -1.21
KDM3B-207ENST00000510866 FBXO21O94952 628 aa7.48□□□□□ -1.21
KDM3B-207ENST00000510866 RARRES1P49788 294 aa7.48□□□□□ -1.21
KDM3B-207ENST00000510866 CCL23P55773 120 aa7.48□□□□□ -1.21
KDM3B-207ENST00000510866 PTRHD1Q6GMV3 140 aaKnown RBP7.48□□□□□ -1.21
KDM3B-207ENST00000510866 TFB1MQ8WVM0 346 aaKnown RBP7.48□□□□□ -1.21
KDM3B-207ENST00000510866 RIN2Q8WYP3 895 aaPredicted RBP7.48□□□□□ -1.21
KDM3B-207ENST00000510866 SYT15Q9BQS2 421 aa7.48□□□□□ -1.21
KDM3B-207ENST00000510866 TUBB6Q9BUF5 446 aa7.48□□□□□ -1.21
KDM3B-207ENST00000510866 SCUBE2Q9NQ36 999 aa7.48□□□□□ -1.21
KDM3B-207ENST00000510866 APOBEC2Q9Y235 224 aaKnown RBP7.48□□□□□ -1.21
KDM3B-207ENST00000510866 MAP3K13O43283 966 aa7.48□□□□□ -1.21
KDM3B-207ENST00000510866 GFAPP14136 432 aa7.48□□□□□ -1.21
KDM3B-207ENST00000510866 CLCN6P51797 869 aa7.48□□□□□ -1.21
KDM3B-207ENST00000510866 CCDC157Q569K6 752 aa7.48□□□□□ -1.21
KDM3B-207ENST00000510866 NUGGCQ68CJ6 796 aa7.48□□□□□ -1.21
KDM3B-207ENST00000510866 ANKS3Q6ZW76 656 aa7.48□□□□□ -1.21
KDM3B-207ENST00000510866 THG1LQ9NWX6 298 aaKnown RBP7.48□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms