RNA–Protein interactions for RNA: ENST00000510533.5

NEK1-206, Transcript of NIMA related kinase 1, humanhuman

TSL 1 (best) BASIC

Gene NEK1, Length 5,377 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK1-206ENST00000510533 BRD2P25440 801 aaKnown RBP11.03□□□□□ -0.64
NEK1-206ENST00000510533 STIP1P31948 543 aaKnown RBP11.03□□□□□ -0.64
NEK1-206ENST00000510533 EPS8L3Q8TE67 593 aaKnown RBP11.03□□□□□ -0.64
NEK1-206ENST00000510533 RBBP8Q99708 897 aa11.03□□□□□ -0.64
NEK1-206ENST00000510533 CD248Q9HCU0 757 aa11.03□□□□□ -0.64
NEK1-206ENST00000510533 TAF6LQ9Y6J9 622 aa11.03□□□□□ -0.64
NEK1-206ENST00000510533 USP31Q70CQ4 1352 aa11.03□□□□□ -0.64
NEK1-206ENST00000510533 PRLRP16471 622 aa11.03□□□□□ -0.64
NEK1-206ENST00000510533 NUDT2P50583 147 aa11.03□□□□□ -0.64
NEK1-206ENST00000510533 OVGP1Q12889 678 aa11.03□□□□□ -0.64
NEK1-206ENST00000510533 DCAF6Q58WW2 860 aa11.03□□□□□ -0.64
NEK1-206ENST00000510533 CYP4A22Q5TCH4 519 aa11.03□□□□□ -0.64
NEK1-206ENST00000510533 MAGEB18Q96M61 343 aa11.03□□□□□ -0.64
NEK1-206ENST00000510533 EXOSC4Q9NPD3 245 aaKnown RBP11.03□□□□□ -0.64
NEK1-206ENST00000510533 ZBTB12Q9Y330 459 aaPredicted RBP11.03□□□□□ -0.64
NEK1-206ENST00000510533 ZBTB39O15060 712 aa11.03□□□□□ -0.64
NEK1-206ENST00000510533 ASMTLO95671 621 aa11.03□□□□□ -0.64
NEK1-206ENST00000510533 SKOR1P84550 965 aa11.03□□□□□ -0.64
NEK1-206ENST00000510533 STX5Q13190 355 aa11.03□□□□□ -0.64
NEK1-206ENST00000510533 RCN1Q15293 331 aa11.03□□□□□ -0.64
NEK1-206ENST00000510533 SV2CQ496J9 727 aa11.03□□□□□ -0.64
NEK1-206ENST00000510533 BOLA3Q53S33 107 aa11.03□□□□□ -0.64
NEK1-206ENST00000510533 PTRHD1Q6GMV3 140 aaKnown RBP11.03□□□□□ -0.64
NEK1-206ENST00000510533 TTC33Q6PID6 262 aaPredicted RBP11.03□□□□□ -0.64
NEK1-206ENST00000510533 NLRP9Q7RTR0 991 aa11.03□□□□□ -0.64
NEK1-206ENST00000510533 P3H2Q8IVL5 708 aa11.03□□□□□ -0.64
NEK1-206ENST00000510533 SNX31Q8N9S9 440 aa11.03□□□□□ -0.64
NEK1-206ENST00000510533 DAGLBQ8NCG7 672 aa11.03□□□□□ -0.64
NEK1-206ENST00000510533 AGPAT3Q9NRZ7 376 aa11.03□□□□□ -0.64
NEK1-206ENST00000510533 ANKEF1Q9NU02 776 aa11.03□□□□□ -0.64
NEK1-206ENST00000510533 SELENONQ9NZV5 590 aa11.03□□□□□ -0.64
NEK1-206ENST00000510533 LSM7Q9UK45 103 aaKnown RBP11.03□□□□□ -0.64
NEK1-206ENST00000510533 DTNAQ9Y4J8 743 aa11.03□□□□□ -0.64
NEK1-206ENST00000510533 A0A087X0T9 212 aa11.03□□□□□ -0.64
NEK1-206ENST00000510533 TNPO2O14787 897 aaKnown RBP11.03□□□□□ -0.64
NEK1-206ENST00000510533 ALBP02768 609 aa11.03□□□□□ -0.64
NEK1-206ENST00000510533 FAM228BP0C875 321 aa11.03□□□□□ -0.64
NEK1-206ENST00000510533 CDC42EP5Q6NZY7 148 aa11.03□□□□□ -0.64
NEK1-206ENST00000510533 PLEKHM3Q6ZWE6 761 aa11.03□□□□□ -0.64
NEK1-206ENST00000510533 PLEKHA8Q96JA3 519 aa11.03□□□□□ -0.64
NEK1-206ENST00000510533 FRMD8P1Q9BZ68 369 aaPredicted RBP11.03□□□□□ -0.64
NEK1-206ENST00000510533 ILKAPQ9H0C8 392 aaPredicted RBP11.03□□□□□ -0.64
NEK1-206ENST00000510533 VCPKMTQ9H867 229 aa11.03□□□□□ -0.64
NEK1-206ENST00000510533 CAAP1Q9H8G2 361 aa11.03□□□□□ -0.64
NEK1-206ENST00000510533 TMBIM4Q9HC24 238 aa11.03□□□□□ -0.64
NEK1-206ENST00000510533 STAU2Q9NUL3 570 aaKnown RBP eCLIP11.03□□□□□ -0.64
NEK1-206ENST00000510533 HEY2Q9UBP5 337 aa11.03□□□□□ -0.64
NEK1-206ENST00000510533 SERPIND1P05546 499 aa11.02□□□□□ -0.64
NEK1-206ENST00000510533 FDFT1P37268 417 aa11.02□□□□□ -0.64
NEK1-206ENST00000510533 RPS6P62753 249 aaKnown RBP11.02□□□□□ -0.64
NEK1-206ENST00000510533 KBTBD12Q3ZCT8 623 aa11.02□□□□□ -0.64
NEK1-206ENST00000510533 CENPPQ6IPU0 288 aa11.02□□□□□ -0.64
NEK1-206ENST00000510533 APLFQ8IW19 511 aaPredicted RBP11.02□□□□□ -0.64
NEK1-206ENST00000510533 ZNF34Q8IZ26 560 aa11.02□□□□□ -0.64
NEK1-206ENST00000510533 C1orf131Q8NDD1 294 aaKnown RBP11.02□□□□□ -0.64
NEK1-206ENST00000510533 TFB1MQ8WVM0 346 aaKnown RBP11.02□□□□□ -0.64
NEK1-206ENST00000510533 CRAMP1Q96RY5 1269 aa11.02□□□□□ -0.64
NEK1-206ENST00000510533 PRMT7Q9NVM4 692 aaPredicted RBP11.02□□□□□ -0.64
NEK1-206ENST00000510533 IQGAP3Q86VI3 1631 aa11.02□□□□□ -0.65
NEK1-206ENST00000510533 BCORL1Q5H9F3 1711 aa11.02□□□□□ -0.65
NEK1-206ENST00000510533 C19orf81C9J6K1 198 aa11.02□□□□□ -0.65
NEK1-206ENST00000510533 MAFGO15525 162 aa11.02□□□□□ -0.65
NEK1-206ENST00000510533 GLRA3O75311 464 aa11.02□□□□□ -0.65
NEK1-206ENST00000510533 ATP6V1B1P15313 513 aa11.02□□□□□ -0.65
NEK1-206ENST00000510533 PON1P27169 355 aa11.02□□□□□ -0.65
NEK1-206ENST00000510533 KPNB1Q14974 876 aaKnown RBP11.02□□□□□ -0.65
NEK1-206ENST00000510533 HHIPL2Q6UWX4 724 aa11.02□□□□□ -0.65
NEK1-206ENST00000510533 LINC00523Q86TU6 105 aa11.02□□□□□ -0.65
NEK1-206ENST00000510533 BBS7Q8IWZ6 715 aa11.02□□□□□ -0.65
NEK1-206ENST00000510533 USP6NLQ92738 828 aa11.02□□□□□ -0.65
NEK1-206ENST00000510533 VPS50Q96JG6 964 aa11.02□□□□□ -0.65
NEK1-206ENST00000510533 TNS3Q68CZ2 1445 aa11.02□□□□□ -0.65
NEK1-206ENST00000510533 SERPINI2O75830 405 aa11.02□□□□□ -0.65
NEK1-206ENST00000510533 H2AFXP16104 143 aaPredicted RBP11.02□□□□□ -0.65
NEK1-206ENST00000510533 PPP3CCP48454 512 aa11.02□□□□□ -0.65
NEK1-206ENST00000510533 TMED10P49755 219 aaKnown RBP11.02□□□□□ -0.65
NEK1-206ENST00000510533 SNX17Q15036 470 aa11.02□□□□□ -0.65
NEK1-206ENST00000510533 FAM83EQ2M2I3 478 aa11.02□□□□□ -0.65
NEK1-206ENST00000510533 MICU2Q8IYU8 434 aa11.02□□□□□ -0.65
NEK1-206ENST00000510533 CNBD2Q96M20 576 aa11.02□□□□□ -0.65
NEK1-206ENST00000510533 TRPC7Q9HCX4 862 aa11.02□□□□□ -0.65
NEK1-206ENST00000510533 SLC38A7Q9NVC3 462 aa11.02□□□□□ -0.65
NEK1-206ENST00000510533 SATB2Q9UPW6 733 aa11.02□□□□□ -0.65
NEK1-206ENST00000510533 CLTCL1P53675 1640 aa11.02□□□□□ -0.65
NEK1-206ENST00000510533 EVPLLA8MZ36 301 aa11.02□□□□□ -0.65
NEK1-206ENST00000510533 PRR23D1E9PI22 279 aaPredicted RBP11.02□□□□□ -0.65
NEK1-206ENST00000510533 TADA2AO75478 443 aa11.02□□□□□ -0.65
NEK1-206ENST00000510533 GH1P01241 217 aa11.02□□□□□ -0.65
NEK1-206ENST00000510533 PRR23D2P0DMB1 279 aaPredicted RBP11.02□□□□□ -0.65
NEK1-206ENST00000510533 SERPINB1P30740 379 aa11.02□□□□□ -0.65
NEK1-206ENST00000510533 NPEPPSP55786 919 aa11.02□□□□□ -0.65
NEK1-206ENST00000510533 CUL2Q13617 745 aa11.02□□□□□ -0.65
NEK1-206ENST00000510533 PTPAQ15257 358 aa11.02□□□□□ -0.65
NEK1-206ENST00000510533 TRIM65Q6PJ69 517 aa11.02□□□□□ -0.65
NEK1-206ENST00000510533 LRRC6Q86X45 466 aa11.02□□□□□ -0.65
NEK1-206ENST00000510533 MUC3BQ9H195 1237 aa11.02□□□□□ -0.65
NEK1-206ENST00000510533 IL25Q9H293 177 aa11.02□□□□□ -0.65
NEK1-206ENST00000510533 OLFML3Q9NRN5 406 aa11.02□□□□□ -0.65
NEK1-206ENST00000510533 H2AFY2Q9P0M6 372 aaPredicted RBP11.02□□□□□ -0.65
NEK1-206ENST00000510533 V9GYQ6 96 aa11.02□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 79.4 ms