RNA–Protein interactions for RNA: ENST00000509967.6

TRIO-214, Transcript of trio Rho guanine nucleotide exchange factor, humanhuman

TSL 2 BASIC

Gene TRIO, Length 4,949 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIO-214ENST00000509967 MAGEA13PA6NCF6 341 aa9.65□□□□□ -0.87
TRIO-214ENST00000509967 H0Y3Z8 333 aa9.65□□□□□ -0.87
TRIO-214ENST00000509967 APRTP07741 180 aa9.65□□□□□ -0.87
TRIO-214ENST00000509967 FAM228BP0C875 321 aa9.65□□□□□ -0.87
TRIO-214ENST00000509967 THRAP10827 490 aa9.65□□□□□ -0.87
TRIO-214ENST00000509967 CALB2P22676 271 aa9.65□□□□□ -0.87
TRIO-214ENST00000509967 MRPS25P82663 173 aaKnown RBP9.65□□□□□ -0.87
TRIO-214ENST00000509967 IL1RL1Q01638 556 aa9.65□□□□□ -0.87
TRIO-214ENST00000509967 ST3GAL1Q11201 340 aa9.65□□□□□ -0.87
TRIO-214ENST00000509967 CLEC16AQ2KHT3 1053 aa9.65□□□□□ -0.87
TRIO-214ENST00000509967 MPZL3Q6UWV2 235 aa9.65□□□□□ -0.87
TRIO-214ENST00000509967 MARCH10Q8NA82 808 aaPredicted RBP9.65□□□□□ -0.87
TRIO-214ENST00000509967 PTPRN2Q92932 1015 aa9.65□□□□□ -0.87
TRIO-214ENST00000509967 LRRC39Q96DD0 335 aa9.65□□□□□ -0.87
TRIO-214ENST00000509967 NAF1Q96HR8 494 aaKnown RBP9.65□□□□□ -0.87
TRIO-214ENST00000509967 SLC13A1Q9BZW2 595 aa9.65□□□□□ -0.87
TRIO-214ENST00000509967 KIF17Q9P2E2 1029 aa9.65□□□□□ -0.87
TRIO-214ENST00000509967 TUBGCP4Q9UGJ1 667 aa9.65□□□□□ -0.87
TRIO-214ENST00000509967 ADGRA3Q8IWK6 1321 aa9.65□□□□□ -0.87
TRIO-214ENST00000509967 KDM1AO60341 852 aa9.64□□□□□ -0.87
TRIO-214ENST00000509967 CST8O60676 142 aa9.64□□□□□ -0.87
TRIO-214ENST00000509967 SUPT20HL2P0C7V6 817 aa9.64□□□□□ -0.87
TRIO-214ENST00000509967 CYP11B1P15538 503 aa9.64□□□□□ -0.87
TRIO-214ENST00000509967 SLC29A2Q14542 456 aa9.64□□□□□ -0.87
TRIO-214ENST00000509967 CRYMQ14894 314 aa9.64□□□□□ -0.87
TRIO-214ENST00000509967 LVRNQ6Q4G3 990 aa9.64□□□□□ -0.87
TRIO-214ENST00000509967 CXorf38Q8TB03 319 aa9.64□□□□□ -0.87
TRIO-214ENST00000509967 CPA5Q8WXQ8 436 aa9.64□□□□□ -0.87
TRIO-214ENST00000509967 TSPAN18Q96SJ8 248 aa9.64□□□□□ -0.87
TRIO-214ENST00000509967 MROH8Q9H579 483 aa9.64□□□□□ -0.87
TRIO-214ENST00000509967 H0Y626 953 aa9.64□□□□□ -0.87
TRIO-214ENST00000509967 TRIM16O95361 564 aa9.64□□□□□ -0.87
TRIO-214ENST00000509967 ERBB2P04626 1255 aa9.64□□□□□ -0.87
TRIO-214ENST00000509967 CYBBP04839 570 aa9.64□□□□□ -0.87
TRIO-214ENST00000509967 COPAP53621 1224 aa9.64□□□□□ -0.87
TRIO-214ENST00000509967 KHDRBS1Q07666 443 aaKnown RBP eCLIP9.64□□□□□ -0.87
TRIO-214ENST00000509967 FAM83EQ2M2I3 478 aa9.64□□□□□ -0.87
TRIO-214ENST00000509967 SCN4BQ8IWT1 228 aa9.64□□□□□ -0.87
TRIO-214ENST00000509967 STKLD1Q8NE28 680 aa9.64□□□□□ -0.87
TRIO-214ENST00000509967 GDF3Q9NR23 364 aa9.64□□□□□ -0.87
TRIO-214ENST00000509967 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP9.64□□□□□ -0.873e-6■■□□□ 12.8
TRIO-214ENST00000509967 FRMD3A2A2Y4 597 aa9.64□□□□□ -0.87
TRIO-214ENST00000509967 SLC37A4O43826 429 aa9.64□□□□□ -0.87
TRIO-214ENST00000509967 NPM3O75607 178 aaKnown RBP9.64□□□□□ -0.87
TRIO-214ENST00000509967 APOA1P02647 267 aa9.64□□□□□ -0.87
TRIO-214ENST00000509967 FCGR1AP12314 374 aa9.64□□□□□ -0.87
TRIO-214ENST00000509967 ETFBP38117 255 aa9.64□□□□□ -0.87
TRIO-214ENST00000509967 CAP2P40123 477 aa9.64□□□□□ -0.87
TRIO-214ENST00000509967 CPT1AP50416 773 aa9.64□□□□□ -0.87
TRIO-214ENST00000509967 LRRC8EQ6NSJ5 796 aa9.64□□□□□ -0.87
TRIO-214ENST00000509967 C16orf87Q6PH81 154 aa9.64□□□□□ -0.87
TRIO-214ENST00000509967 ZPBP2Q6X784 338 aa9.64□□□□□ -0.87
TRIO-214ENST00000509967 PNKPQ96T60 521 aa9.64□□□□□ -0.87
TRIO-214ENST00000509967 DCLRE1BQ9H816 532 aa9.64□□□□□ -0.87
TRIO-214ENST00000509967 GEMIN8Q9NWZ8 242 aaKnown RBP9.64□□□□□ -0.87
TRIO-214ENST00000509967 SORCS3Q9UPU3 1222 aa9.64□□□□□ -0.87
TRIO-214ENST00000509967 AP3M1Q9Y2T2 418 aa9.64□□□□□ -0.87
TRIO-214ENST00000509967 ATXN2Q99700 1313 aaKnown RBP9.64□□□□□ -0.87
TRIO-214ENST00000509967 NQO1P15559 274 aaKnown RBP9.64□□□□□ -0.87
TRIO-214ENST00000509967 HMGCS2P54868 508 aa9.64□□□□□ -0.87
TRIO-214ENST00000509967 POU5F1BQ06416 359 aa9.64□□□□□ -0.87
TRIO-214ENST00000509967 CYP24A1Q07973 514 aa9.64□□□□□ -0.87
TRIO-214ENST00000509967 DNAJC3Q13217 504 aa9.64□□□□□ -0.87
TRIO-214ENST00000509967 PDAP1Q13442 181 aaKnown RBP9.64□□□□□ -0.87
TRIO-214ENST00000509967 USP10Q14694 798 aaKnown RBP9.64□□□□□ -0.87
TRIO-214ENST00000509967 DCLK2Q8N568 766 aa9.64□□□□□ -0.87
TRIO-214ENST00000509967 OR6P1Q8NGX9 317 aa9.64□□□□□ -0.87
TRIO-214ENST00000509967 ATP8B4Q8TF62 1192 aa9.64□□□□□ -0.87
TRIO-214ENST00000509967 BCL9O00512 1426 aa9.63□□□□□ -0.87
TRIO-214ENST00000509967 ROBO3Q96MS0 1386 aa9.63□□□□□ -0.87
TRIO-214ENST00000509967 HACD1B0YJ81 288 aa9.63□□□□□ -0.87
TRIO-214ENST00000509967 MAN1A2O60476 641 aa9.63□□□□□ -0.87
TRIO-214ENST00000509967 PAEPP09466 180 aa9.63□□□□□ -0.87
TRIO-214ENST00000509967 TKTP29401 623 aaKnown RBP9.63□□□□□ -0.87
TRIO-214ENST00000509967 HMOX2P30519 316 aa9.63□□□□□ -0.87
TRIO-214ENST00000509967 ITPK1Q13572 414 aa9.63□□□□□ -0.87
TRIO-214ENST00000509967 LLGL1Q15334 1064 aa9.63□□□□□ -0.87
TRIO-214ENST00000509967 PCBP1Q15365 356 aaKnown RBP eCLIP9.63□□□□□ -0.87
TRIO-214ENST00000509967 DGKDQ16760 1214 aa9.63□□□□□ -0.87
TRIO-214ENST00000509967 AGAP9Q5VTM2 703 aa9.63□□□□□ -0.87
TRIO-214ENST00000509967 PATL1Q86TB9 770 aaKnown RBP9.63□□□□□ -0.87
TRIO-214ENST00000509967 SLC26A11Q86WA9 606 aa9.63□□□□□ -0.87
TRIO-214ENST00000509967 TRIM69Q86WT6 500 aa9.63□□□□□ -0.87
TRIO-214ENST00000509967 SH2D3CQ8N5H7 860 aa9.63□□□□□ -0.87
TRIO-214ENST00000509967 C1orf131Q8NDD1 294 aaKnown RBP9.63□□□□□ -0.87
TRIO-214ENST00000509967 AENQ8WTP8 325 aaKnown RBP9.63□□□□□ -0.87
TRIO-214ENST00000509967 CDK5RAP1Q96SZ6 601 aaKnown RBP9.63□□□□□ -0.87
TRIO-214ENST00000509967 THAP2Q9H0W7 228 aa9.63□□□□□ -0.87
TRIO-214ENST00000509967 LRRC40Q9H9A6 602 aa9.63□□□□□ -0.87
TRIO-214ENST00000509967 SENP2Q9HC62 589 aa9.63□□□□□ -0.87
TRIO-214ENST00000509967 NPHS2Q9NP85 383 aa9.63□□□□□ -0.87
TRIO-214ENST00000509967 TRIM10Q9UDY6 481 aa9.63□□□□□ -0.87
TRIO-214ENST00000509967 ITGA11Q9UKX5 1188 aa9.63□□□□□ -0.87
TRIO-214ENST00000509967 PCDHGC5Q9Y5F6 944 aa9.63□□□□□ -0.87
TRIO-214ENST00000509967 TBC1D4O60343 1298 aa9.63□□□□□ -0.87
TRIO-214ENST00000509967 EFCAB14O75071 495 aa9.63□□□□□ -0.87
TRIO-214ENST00000509967 RPS6KA5O75582 802 aa9.63□□□□□ -0.87
TRIO-214ENST00000509967 HIST1H2AGP0C0S8 130 aaPredicted RBP9.63□□□□□ -0.87
TRIO-214ENST00000509967 HIST1H2ADP20671 130 aa9.63□□□□□ -0.87
TRIO-214ENST00000509967 KPNA1P52294 538 aaPredicted RBP9.63□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms