RNA–Protein interactions for RNA: ENST00000509876.5

PHF3-210, Transcript of PHD finger protein 3, humanhuman

TSL 1 (best)

Gene PHF3, Length 7,124 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF3-210ENST00000509876 CDC25CP30307 473 aa5.39□□□□□ -1.55
PHF3-210ENST00000509876 ETFBP38117 255 aa5.39□□□□□ -1.55
PHF3-210ENST00000509876 GTF2H3Q13889 308 aa5.39□□□□□ -1.55
PHF3-210ENST00000509876 PTPN21Q16825 1174 aa5.39□□□□□ -1.55
PHF3-210ENST00000509876 HYIQ5T013 277 aa5.39□□□□□ -1.55
PHF3-210ENST00000509876 ZDHHC17Q8IUH5 632 aa5.39□□□□□ -1.55
PHF3-210ENST00000509876 CARNMT1Q8N4J0 409 aa5.39□□□□□ -1.55
PHF3-210ENST00000509876 MCEEQ96PE7 176 aa5.39□□□□□ -1.55
PHF3-210ENST00000509876 WDCPQ9H6R7 721 aa5.39□□□□□ -1.55
PHF3-210ENST00000509876 IL23AQ9NPF7 189 aa5.39□□□□□ -1.55
PHF3-210ENST00000509876 CISHQ9NSE2 258 aa5.39□□□□□ -1.55
PHF3-210ENST00000509876 BLOC1S4Q9NUP1 217 aa5.39□□□□□ -1.55
PHF3-210ENST00000509876 FNDC3AQ9Y2H6 1198 aaKnown RBP5.39□□□□□ -1.55
PHF3-210ENST00000509876 IGLV3-22A0A075B6J6 115 aa5.39□□□□□ -1.55
PHF3-210ENST00000509876 ANKRD63C9JTQ0 380 aa5.39□□□□□ -1.55
PHF3-210ENST00000509876 TSPAN1O60635 241 aa5.39□□□□□ -1.55
PHF3-210ENST00000509876 CNMDO75829 334 aa5.39□□□□□ -1.55
PHF3-210ENST00000509876 C22orf31O95567 290 aa5.39□□□□□ -1.55
PHF3-210ENST00000509876 PAEPP09466 180 aa5.39□□□□□ -1.55
PHF3-210ENST00000509876 MX2P20592 715 aa5.39□□□□□ -1.55
PHF3-210ENST00000509876 ARL2P36404 184 aa5.39□□□□□ -1.55
PHF3-210ENST00000509876 YWHAGP61981 247 aaKnown RBP eCLIP5.39□□□□□ -1.55
PHF3-210ENST00000509876 ROR1Q01973 937 aa5.39□□□□□ -1.55
PHF3-210ENST00000509876 ATAT1Q5SQI0 421 aa5.39□□□□□ -1.55
PHF3-210ENST00000509876 TOP6BLQ8N6T0 577 aa5.39□□□□□ -1.55
PHF3-210ENST00000509876 DDI1Q8WTU0 396 aa5.39□□□□□ -1.55
PHF3-210ENST00000509876 RFFLQ8WZ73 363 aa5.39□□□□□ -1.55
PHF3-210ENST00000509876 PGLYRP2Q96PD5 576 aa5.39□□□□□ -1.55
PHF3-210ENST00000509876 POP1Q99575 1024 aaKnown RBP5.39□□□□□ -1.55
PHF3-210ENST00000509876 TCF25Q9BQ70 676 aa5.39□□□□□ -1.55
PHF3-210ENST00000509876 TRIM56Q9BRZ2 755 aaKnown RBP5.39□□□□□ -1.55
PHF3-210ENST00000509876 TSSK1BQ9BXA7 367 aa5.39□□□□□ -1.55
PHF3-210ENST00000509876 KCNK9Q9NPC2 374 aa5.39□□□□□ -1.55
PHF3-210ENST00000509876 METTL5Q9NRN9 209 aaKnown RBP5.39□□□□□ -1.55
PHF3-210ENST00000509876 HEY1Q9Y5J3 304 aa5.39□□□□□ -1.55
PHF3-210ENST00000509876 FHOD1Q9Y613 1164 aa5.39□□□□□ -1.55
PHF3-210ENST00000509876 TLDC2A0PJX2 215 aa5.39□□□□□ -1.55
PHF3-210ENST00000509876 FTCDO95954 541 aa5.39□□□□□ -1.55
PHF3-210ENST00000509876 SPATA31C1P0DKV0 1188 aa5.39□□□□□ -1.55
PHF3-210ENST00000509876 VPS41P49754 854 aa5.39□□□□□ -1.55
PHF3-210ENST00000509876 TKTL1P51854 596 aa5.39□□□□□ -1.55
PHF3-210ENST00000509876 SNX1Q13596 522 aa5.39□□□□□ -1.55
PHF3-210ENST00000509876 PCGF5Q86SE9 256 aa5.39□□□□□ -1.55
PHF3-210ENST00000509876 C18orf25Q96B23 403 aaPredicted RBP5.39□□□□□ -1.55
PHF3-210ENST00000509876 ZBTB45Q96K62 511 aaPredicted RBP5.39□□□□□ -1.55
PHF3-210ENST00000509876 CORO1BQ9BR76 489 aa5.39□□□□□ -1.55
PHF3-210ENST00000509876 TMEM175Q9BSA9 504 aa5.39□□□□□ -1.55
PHF3-210ENST00000509876 MMTAG2Q9BU76 263 aaKnown RBP5.39□□□□□ -1.55
PHF3-210ENST00000509876 TRIM7Q9C029 511 aa5.39□□□□□ -1.55
PHF3-210ENST00000509876 MYH14Q7Z406 1995 aaKnown RBP5.39□□□□□ -1.55
PHF3-210ENST00000509876 LRRIQ3A6PVS8 624 aaPredicted RBP5.39□□□□□ -1.55
PHF3-210ENST00000509876 AP3B1O00203 1094 aa5.39□□□□□ -1.55
PHF3-210ENST00000509876 CASP4P49662 377 aa5.39□□□□□ -1.55
PHF3-210ENST00000509876 NDST1P52848 882 aa5.39□□□□□ -1.55
PHF3-210ENST00000509876 LAMB3Q13751 1172 aa5.39□□□□□ -1.55
PHF3-210ENST00000509876 POLD3Q15054 466 aaPredicted RBP5.39□□□□□ -1.55
PHF3-210ENST00000509876 MIB1Q86YT6 1006 aa5.39□□□□□ -1.55
PHF3-210ENST00000509876 SIAH1Q8IUQ4 282 aa5.39□□□□□ -1.55
PHF3-210ENST00000509876 ACRBPQ8NEB7 543 aa5.39□□□□□ -1.55
PHF3-210ENST00000509876 SYN2Q92777 582 aaPredicted RBP5.39□□□□□ -1.55
PHF3-210ENST00000509876 EMID1Q96A84 441 aaPredicted RBP5.39□□□□□ -1.55
PHF3-210ENST00000509876 CERS4Q9HA82 394 aa5.39□□□□□ -1.55
PHF3-210ENST00000509876 A0A1B0GTH6 734 aa5.39□□□□□ -1.55
PHF3-210ENST00000509876 SYN3O14994 580 aa5.39□□□□□ -1.55
PHF3-210ENST00000509876 ARF4P18085 180 aaPredicted RBP5.39□□□□□ -1.55
PHF3-210ENST00000509876 SLC9A1P19634 815 aa5.39□□□□□ -1.55
PHF3-210ENST00000509876 MBTD1Q05BQ5 628 aa5.39□□□□□ -1.55
PHF3-210ENST00000509876 ARHGEF7Q14155 803 aa5.39□□□□□ -1.55
PHF3-210ENST00000509876 DENND2CQ68D51 928 aa5.39□□□□□ -1.55
PHF3-210ENST00000509876 RCOR2Q8IZ40 523 aa5.39□□□□□ -1.55
PHF3-210ENST00000509876 C1orf131Q8NDD1 294 aaKnown RBP5.39□□□□□ -1.55
PHF3-210ENST00000509876 SEMA6BQ9H3T3 888 aa5.39□□□□□ -1.55
PHF3-210ENST00000509876 ACAT1P24752 427 aaKnown RBP5.38□□□□□ -1.55
PHF3-210ENST00000509876 PSEN1P49768 467 aa5.38□□□□□ -1.55
PHF3-210ENST00000509876 ORC1Q13415 861 aa5.38□□□□□ -1.55
PHF3-210ENST00000509876 TSTA3Q13630 321 aaPredicted RBP5.38□□□□□ -1.55
PHF3-210ENST00000509876 AAK1Q2M2I8 961 aa5.38□□□□□ -1.55
PHF3-210ENST00000509876 VPS52Q8N1B4 723 aa5.38□□□□□ -1.55
PHF3-210ENST00000509876 DBF4BQ8NFT6 615 aa5.38□□□□□ -1.55
PHF3-210ENST00000509876 USP13Q92995 863 aaPredicted RBP5.38□□□□□ -1.55
PHF3-210ENST00000509876 FAF2Q96CS3 445 aa5.38□□□□□ -1.55
PHF3-210ENST00000509876 SERPINB11Q96P15 392 aa5.38□□□□□ -1.55
PHF3-210ENST00000509876 DDIT4Q9NX09 232 aa5.38□□□□□ -1.55
PHF3-210ENST00000509876 PLA2G4CQ9UP65 541 aa5.38□□□□□ -1.55
PHF3-210ENST00000509876 DOLKQ9UPQ8 538 aa5.38□□□□□ -1.55
PHF3-210ENST00000509876 HES2Q9Y543 173 aa5.38□□□□□ -1.55
PHF3-210ENST00000509876 GTPBP10A4D1E9 387 aaKnown RBP5.38□□□□□ -1.55
PHF3-210ENST00000509876 M0QYT0 321 aa5.38□□□□□ -1.55
PHF3-210ENST00000509876 B4GALT5O43286 388 aa5.38□□□□□ -1.55
PHF3-210ENST00000509876 F2P00734 622 aa5.38□□□□□ -1.55
PHF3-210ENST00000509876 ZNF865P0CJ78 1059 aaPredicted RBP5.38□□□□□ -1.55
PHF3-210ENST00000509876 KPNA2P52292 529 aaKnown RBP5.38□□□□□ -1.55
PHF3-210ENST00000509876 GEMIN4P57678 1058 aaKnown RBP5.38□□□□□ -1.55
PHF3-210ENST00000509876 POU5F1BQ06416 359 aa5.38□□□□□ -1.55
PHF3-210ENST00000509876 ADCY1Q08828 1119 aa5.38□□□□□ -1.55
PHF3-210ENST00000509876 TIGD5Q53EQ6 642 aa5.38□□□□□ -1.55
PHF3-210ENST00000509876 RAB44Q7Z6P3 723 aaPredicted RBP5.38□□□□□ -1.55
PHF3-210ENST00000509876 LRRC52Q8N7C0 313 aa5.38□□□□□ -1.55
PHF3-210ENST00000509876 ENGASEQ8NFI3 743 aa5.38□□□□□ -1.55
PHF3-210ENST00000509876 TAS1R2Q8TE23 839 aa5.38□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms