RNA–Protein interactions for RNA: ENST00000509860.1

PRDM16-205, Transcript of PR/SET domain 16, humanhuman

TSL 5

Gene PRDM16, Length 3,737 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM16-205ENST00000509860 GOLGA6L1Q8N7Z2 621 aa13.21□□□□□ -0.29
PRDM16-205ENST00000509860 CD99L2Q8TCZ2 262 aa13.21□□□□□ -0.29
PRDM16-205ENST00000509860 ZFP42Q96MM3 310 aa13.21□□□□□ -0.29
PRDM16-205ENST00000509860 TRIM51Q9BSJ1 452 aa13.21□□□□□ -0.29
PRDM16-205ENST00000509860 CYP3A43Q9HB55 503 aa13.21□□□□□ -0.29
PRDM16-205ENST00000509860 XPNPEP3Q9NQH7 507 aa13.21□□□□□ -0.29
PRDM16-205ENST00000509860 RARAP10276 462 aa13.21□□□□□ -0.29
PRDM16-205ENST00000509860 FLT3P36888 993 aa13.21□□□□□ -0.29
PRDM16-205ENST00000509860 SSR1P43307 286 aaKnown RBP13.21□□□□□ -0.29
PRDM16-205ENST00000509860 GABRB2P47870 512 aa13.21□□□□□ -0.29
PRDM16-205ENST00000509860 NOGQ13253 232 aa13.21□□□□□ -0.29
PRDM16-205ENST00000509860 SMYD5Q6GMV2 418 aa13.21□□□□□ -0.29
PRDM16-205ENST00000509860 TRAF7Q6Q0C0 670 aa13.21□□□□□ -0.29
PRDM16-205ENST00000509860 FEZF2Q8TBJ5 459 aa13.21□□□□□ -0.29
PRDM16-205ENST00000509860 TRIM11Q96F44 468 aa13.21□□□□□ -0.29
PRDM16-205ENST00000509860 MCEEQ96PE7 176 aa13.21□□□□□ -0.29
PRDM16-205ENST00000509860 PPP1R10Q96QC0 940 aaKnown RBP13.21□□□□□ -0.29
PRDM16-205ENST00000509860 BARX2Q9UMQ3 279 aaPredicted RBP13.21□□□□□ -0.29
PRDM16-205ENST00000509860 NFU1Q9UMS0 254 aa13.21□□□□□ -0.29
PRDM16-205ENST00000509860 NLRC5Q86WI3 1866 aa13.21□□□□□ -0.3
PRDM16-205ENST00000509860 F8VP50 259 aa13.21□□□□□ -0.3
PRDM16-205ENST00000509860 SP3Q02447 781 aa13.21□□□□□ -0.3
PRDM16-205ENST00000509860 TTC30AQ86WT1 665 aa13.21□□□□□ -0.3
PRDM16-205ENST00000509860 SLC13A5Q86YT5 568 aaPredicted RBP13.21□□□□□ -0.3
PRDM16-205ENST00000509860 MIOSQ9NXC5 875 aa13.21□□□□□ -0.3
PRDM16-205ENST00000509860 ZNF638Q14966 1978 aaKnown RBP13.2□□□□□ -0.3
PRDM16-205ENST00000509860 ALDH1A1P00352 501 aa13.2□□□□□ -0.3
PRDM16-205ENST00000509860 SF3A3Q12874 501 aaKnown RBP eCLIP13.2□□□□□ -0.3
PRDM16-205ENST00000509860 CAVIN3Q969G5 261 aa13.2□□□□□ -0.3
PRDM16-205ENST00000509860 ZNF518BQ9C0D4 1074 aa13.2□□□□□ -0.3
PRDM16-205ENST00000509860 ST3GAL5Q9UNP4 418 aa13.2□□□□□ -0.3
PRDM16-205ENST00000509860 R3HDM2Q9Y2K5 976 aaKnown RBP13.2□□□□□ -0.3
PRDM16-205ENST00000509860 C3orf70A6NLC5 250 aaPredicted RBP13.2□□□□□ -0.3
PRDM16-205ENST00000509860 TLR3O15455 904 aaKnown RBP13.2□□□□□ -0.3
PRDM16-205ENST00000509860 TOMM70O94826 608 aa13.2□□□□□ -0.3
PRDM16-205ENST00000509860 SYF2O95926 243 aaKnown RBP13.2□□□□□ -0.3
PRDM16-205ENST00000509860 CTSHP09668 335 aa13.2□□□□□ -0.3
PRDM16-205ENST00000509860 IBSPP21815 317 aaPredicted RBP13.2□□□□□ -0.3
PRDM16-205ENST00000509860 PPP1R26Q5T8A7 1209 aaPredicted RBP13.2□□□□□ -0.3
PRDM16-205ENST00000509860 CYP4V2Q6ZWL3 525 aaPredicted RBP13.2□□□□□ -0.3
PRDM16-205ENST00000509860 PARVAQ9NVD7 372 aa13.2□□□□□ -0.3
PRDM16-205ENST00000509860 SPOPO43791 374 aa13.2□□□□□ -0.3
PRDM16-205ENST00000509860 RARBP10826 455 aa13.2□□□□□ -0.3
PRDM16-205ENST00000509860 ATF7P17544 494 aaPredicted RBP13.2□□□□□ -0.3
PRDM16-205ENST00000509860 LMO2P25791 158 aa13.2□□□□□ -0.3
PRDM16-205ENST00000509860 MAN1A1P33908 653 aa13.2□□□□□ -0.3
PRDM16-205ENST00000509860 TAF2Q6P1X5 1199 aa13.2□□□□□ -0.3
PRDM16-205ENST00000509860 C3orf20Q8ND61 904 aa13.2□□□□□ -0.3
PRDM16-205ENST00000509860 UBA3Q8TBC4 463 aa13.2□□□□□ -0.3
PRDM16-205ENST00000509860 TRMT13Q9NUP7 481 aaKnown RBP13.2□□□□□ -0.3
PRDM16-205ENST00000509860 TRPV2Q9Y5S1 764 aa13.2□□□□□ -0.3
PRDM16-205ENST00000509860 CCDC188H7C350 402 aa13.19□□□□□ -0.3
PRDM16-205ENST00000509860 KPNA6O60684 536 aa13.19□□□□□ -0.3
PRDM16-205ENST00000509860 TUBBP07437 444 aa13.19□□□□□ -0.3
PRDM16-205ENST00000509860 RFC1P35251 1148 aaPredicted RBP13.19□□□□□ -0.3
PRDM16-205ENST00000509860 HTRA3P83110 453 aa13.19□□□□□ -0.3
PRDM16-205ENST00000509860 PDCLQ13371 301 aa13.19□□□□□ -0.3
PRDM16-205ENST00000509860 TTC19Q6DKK2 380 aaPredicted RBP13.19□□□□□ -0.3
PRDM16-205ENST00000509860 HDXQ7Z353 690 aa13.19□□□□□ -0.3
PRDM16-205ENST00000509860 UBL4BQ8N7F7 174 aa13.19□□□□□ -0.3
PRDM16-205ENST00000509860 TMEM35BQ8NCS4 154 aa13.19□□□□□ -0.3
PRDM16-205ENST00000509860 KHSRPQ92945 711 aaKnown RBP eCLIP13.19□□□□□ -0.3
PRDM16-205ENST00000509860 CREBZFQ9NS37 354 aa13.19□□□□□ -0.3
PRDM16-205ENST00000509860 KLHL11Q9NVR0 708 aa13.19□□□□□ -0.3
PRDM16-205ENST00000509860 SRRDQ9UH36 339 aa13.19□□□□□ -0.3
PRDM16-205ENST00000509860 FSCN2O14926 492 aa13.19□□□□□ -0.3
PRDM16-205ENST00000509860 SLC25A11Q02978 314 aaKnown RBP13.19□□□□□ -0.3
PRDM16-205ENST00000509860 KIAA0319Q5VV43 1072 aa13.19□□□□□ -0.3
PRDM16-205ENST00000509860 LRRC52Q8N7C0 313 aa13.19□□□□□ -0.3
PRDM16-205ENST00000509860 NIPA2Q8N8Q9 360 aa13.19□□□□□ -0.3
PRDM16-205ENST00000509860 C12orf50Q8NA57 414 aaPredicted RBP13.19□□□□□ -0.3
PRDM16-205ENST00000509860 LPPQ93052 612 aa13.19□□□□□ -0.3
PRDM16-205ENST00000509860 ADAM33Q9BZ11 813 aa13.19□□□□□ -0.3
PRDM16-205ENST00000509860 LRRC4CQ9HCJ2 640 aa13.19□□□□□ -0.3
PRDM16-205ENST00000509860 SNX9Q9Y5X1 595 aa13.19□□□□□ -0.3
PRDM16-205ENST00000509860 PATJQ8NI35 1801 aa13.19□□□□□ -0.3
PRDM16-205ENST00000509860 PTPRDP23468 1912 aa13.19□□□□□ -0.3
PRDM16-205ENST00000509860 IL1R2P27930 398 aa13.18□□□□□ -0.3
PRDM16-205ENST00000509860 TNNC1P63316 161 aa13.18□□□□□ -0.3
PRDM16-205ENST00000509860 CNGA2Q16280 664 aa13.18□□□□□ -0.3
PRDM16-205ENST00000509860 UBAP2Q5T6F2 1119 aaKnown RBP13.18□□□□□ -0.3
PRDM16-205ENST00000509860 LHX8Q68G74 356 aa13.18□□□□□ -0.3
PRDM16-205ENST00000509860 LCLAT1Q6UWP7 414 aa13.18□□□□□ -0.3
PRDM16-205ENST00000509860 OSTM1Q86WC4 334 aa13.18□□□□□ -0.3
PRDM16-205ENST00000509860 C3orf58Q8NDZ4 430 aa13.18□□□□□ -0.3
PRDM16-205ENST00000509860 SLITRK6Q9H5Y7 841 aa13.18□□□□□ -0.3
PRDM16-205ENST00000509860 CCDC189A1A4V9 331 aa13.18□□□□□ -0.3
PRDM16-205ENST00000509860 CD19P15391 556 aa13.18□□□□□ -0.3
PRDM16-205ENST00000509860 SLC1A1P43005 524 aa13.18□□□□□ -0.3
PRDM16-205ENST00000509860 RWDD2BP57060 319 aa13.18□□□□□ -0.3
PRDM16-205ENST00000509860 DEFB115Q30KQ5 88 aa13.18□□□□□ -0.3
PRDM16-205ENST00000509860 TTC31Q49AM3 519 aaPredicted RBP13.18□□□□□ -0.3
PRDM16-205ENST00000509860 ACSF2Q96CM8 615 aaPredicted RBP13.18□□□□□ -0.3
PRDM16-205ENST00000509860 MCRS1Q96EZ8 462 aa13.18□□□□□ -0.3
PRDM16-205ENST00000509860 ZDHHC18Q9NUE0 388 aa13.18□□□□□ -0.3
PRDM16-205ENST00000509860 TSPAN16Q9UKR8 245 aa13.18□□□□□ -0.3
PRDM16-205ENST00000509860 PIK3R2O00459 728 aa13.18□□□□□ -0.3
PRDM16-205ENST00000509860 PHF2O75151 1096 aa13.18□□□□□ -0.3
PRDM16-205ENST00000509860 CALB1P05937 261 aa13.18□□□□□ -0.3
PRDM16-205ENST00000509860 GNAT1P11488 350 aa13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms