RNA–Protein interactions for RNA: ENST00000509388.5

RNF4-213, Transcript of ring finger protein 4, humanhuman

TSL 3

Gene RNF4, Length 569 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-213ENST00000509388 ZNF397Q8NF99 534 aaPredicted RBP15.79■□□□□ 0.12
RNF4-213ENST00000509388 MYCBPAPQ8TBZ2 947 aa15.79■□□□□ 0.12
RNF4-213ENST00000509388 WHAMMQ8TF30 809 aa15.79■□□□□ 0.12
RNF4-213ENST00000509388 C2orf15Q8WU43 125 aaKnown RBP15.79■□□□□ 0.12
RNF4-213ENST00000509388 GUCD1Q96NT3 240 aa15.79■□□□□ 0.12
RNF4-213ENST00000509388 TWNKQ96RR1 684 aa15.79■□□□□ 0.12
RNF4-213ENST00000509388 ELOVL4Q9GZR5 314 aa15.79■□□□□ 0.12
RNF4-213ENST00000509388 CYP4F11Q9HBI6 524 aa15.79■□□□□ 0.12
RNF4-213ENST00000509388 CEP72Q9P209 647 aa15.79■□□□□ 0.12
RNF4-213ENST00000509388 HMGXB4Q9UGU5 601 aa15.79■□□□□ 0.12
RNF4-213ENST00000509388 KIAA1257Q9ULG3 409 aa15.79■□□□□ 0.12
RNF4-213ENST00000509388 MAFFQ9ULX9 164 aa15.79■□□□□ 0.12
RNF4-213ENST00000509388 PCDHB5Q9Y5E4 795 aa15.79■□□□□ 0.12
RNF4-213ENST00000509388 ATP8B3O60423 1300 aa15.78■□□□□ 0.12
RNF4-213ENST00000509388 FOXN3O00409 490 aaPredicted RBP15.78■□□□□ 0.12
RNF4-213ENST00000509388 PRRG1O14668 218 aa15.78■□□□□ 0.12
RNF4-213ENST00000509388 ABLIM3O94929 683 aa15.78■□□□□ 0.12
RNF4-213ENST00000509388 C1RP00736 705 aa15.78■□□□□ 0.12
RNF4-213ENST00000509388 PAEPP09466 180 aa15.78■□□□□ 0.12
RNF4-213ENST00000509388 SPATA31D3P0C874 917 aa15.78■□□□□ 0.12
RNF4-213ENST00000509388 ATF2P15336 505 aa15.78■□□□□ 0.12
RNF4-213ENST00000509388 CLCN4P51793 760 aa15.78■□□□□ 0.12
RNF4-213ENST00000509388 ZNF75DP51815 510 aa15.78■□□□□ 0.12
RNF4-213ENST00000509388 RAD23BP54727 409 aa15.78■□□□□ 0.12
RNF4-213ENST00000509388 BPIFB4P59827 614 aa15.78■□□□□ 0.12
RNF4-213ENST00000509388 PTK2Q05397 1052 aa15.78■□□□□ 0.12
RNF4-213ENST00000509388 ADCY1Q08828 1119 aa15.78■□□□□ 0.12
RNF4-213ENST00000509388 SKIV2LQ15477 1246 aaKnown RBP15.78■□□□□ 0.12
RNF4-213ENST00000509388 SPECC1LQ69YQ0 1117 aa15.78■□□□□ 0.12
RNF4-213ENST00000509388 DPY19L2P1Q6NXN4 242 aa15.78■□□□□ 0.12
RNF4-213ENST00000509388 FAM171BQ6P995 826 aa15.78■□□□□ 0.12
RNF4-213ENST00000509388 RNF19BQ6ZMZ0 732 aa15.78■□□□□ 0.12
RNF4-213ENST00000509388 EP400NLQ6ZTU2 488 aa15.78■□□□□ 0.12
RNF4-213ENST00000509388 SPATA31D4Q6ZUB0 917 aa15.78■□□□□ 0.12
RNF4-213ENST00000509388 LRRTM3Q86VH5 581 aa15.78■□□□□ 0.12
RNF4-213ENST00000509388 FMNL3Q8IVF7 1028 aa15.78■□□□□ 0.12
RNF4-213ENST00000509388 UBR7Q8N806 425 aa15.78■□□□□ 0.12
RNF4-213ENST00000509388 KREMEN2Q8NCW0 462 aa15.78■□□□□ 0.12
RNF4-213ENST00000509388 SPPL2BQ8TCT7 592 aa15.78■□□□□ 0.12
RNF4-213ENST00000509388 CPLX3Q8WVH0 158 aa15.78■□□□□ 0.12
RNF4-213ENST00000509388 SHC3Q92529 594 aa15.78■□□□□ 0.12
RNF4-213ENST00000509388 MYLPFQ96A32 169 aa15.78■□□□□ 0.12
RNF4-213ENST00000509388 NAA15Q9BXJ9 866 aaKnown RBP15.78■□□□□ 0.12
RNF4-213ENST00000509388 EDEM3Q9BZQ6 932 aa15.78■□□□□ 0.12
RNF4-213ENST00000509388 CRTAC1Q9NQ79 661 aa15.78■□□□□ 0.12
RNF4-213ENST00000509388 ABI2Q9NYB9 513 aaPredicted RBP15.78■□□□□ 0.12
RNF4-213ENST00000509388 NME7Q9Y5B8 376 aa15.78■□□□□ 0.12
RNF4-213ENST00000509388 PLXNA4Q9HCM2 1894 aa15.78■□□□□ 0.12
RNF4-213ENST00000509388 ITIH6Q6UXX5 1313 aa15.77■□□□□ 0.12
RNF4-213ENST00000509388 MTMR11A4FU01 709 aa15.77■□□□□ 0.12
RNF4-213ENST00000509388 EPHB6O15197 1021 aa15.77■□□□□ 0.12
RNF4-213ENST00000509388 CCDC172P0C7W6 258 aa15.77■□□□□ 0.12
RNF4-213ENST00000509388 VDRP11473 427 aa15.77■□□□□ 0.12
RNF4-213ENST00000509388 PBX1P40424 430 aa15.77■□□□□ 0.12
RNF4-213ENST00000509388 TUFMP49411 452 aaKnown RBP15.77■□□□□ 0.12
RNF4-213ENST00000509388 CDR1P51861 262 aa15.77■□□□□ 0.12
RNF4-213ENST00000509388 HYAL1Q12794 435 aa15.77■□□□□ 0.12
RNF4-213ENST00000509388 DUSP4Q13115 394 aa15.77■□□□□ 0.12
RNF4-213ENST00000509388 CCDC85BQ15834 202 aaPredicted RBP15.77■□□□□ 0.12
RNF4-213ENST00000509388 MGAT5BQ3V5L5 792 aa15.77■□□□□ 0.12
RNF4-213ENST00000509388 SGO2Q562F6 1265 aa15.77■□□□□ 0.12
RNF4-213ENST00000509388 FIGNQ5HY92 759 aa15.77■□□□□ 0.12
RNF4-213ENST00000509388 CCDC149Q6ZUS6 474 aa15.77■□□□□ 0.12
RNF4-213ENST00000509388 VSTM4Q8IW00 320 aa15.77■□□□□ 0.12
RNF4-213ENST00000509388 DRC7Q8IY82 874 aa15.77■□□□□ 0.12
RNF4-213ENST00000509388 SLC4A11Q8NBS3 891 aa15.77■□□□□ 0.12
RNF4-213ENST00000509388 ATAD1Q8NBU5 361 aa15.77■□□□□ 0.12
RNF4-213ENST00000509388 PPM1EQ8WY54 764 aa15.77■□□□□ 0.12
RNF4-213ENST00000509388 CASP10Q92851 521 aa15.77■□□□□ 0.12
RNF4-213ENST00000509388 CYFIP2Q96F07 1278 aa15.77■□□□□ 0.12
RNF4-213ENST00000509388 PCED1BQ96HM7 432 aa15.77■□□□□ 0.12
RNF4-213ENST00000509388 SEPT5Q99719 369 aaPredicted RBP15.77■□□□□ 0.12
RNF4-213ENST00000509388 PLEKHA4Q9H4M7 779 aa15.77■□□□□ 0.12
RNF4-213ENST00000509388 GRPEL1Q9HAV7 217 aa15.77■□□□□ 0.12
RNF4-213ENST00000509388 FAM49BQ9NUQ9 324 aa15.77■□□□□ 0.12
RNF4-213ENST00000509388 TMLHEQ9NVH6 421 aa15.77■□□□□ 0.12
RNF4-213ENST00000509388 AJAP1Q9UKB5 411 aaPredicted RBP15.77■□□□□ 0.12
RNF4-213ENST00000509388 CNTN6Q9UQ52 1028 aa15.77■□□□□ 0.12
RNF4-213ENST00000509388 SLC27A5Q9Y2P5 690 aa15.77■□□□□ 0.12
RNF4-213ENST00000509388 HCFC2Q9Y5Z7 792 aa15.77■□□□□ 0.12
RNF4-213ENST00000509388 LAMA3Q16787 3333 aa15.76■□□□□ 0.11
RNF4-213ENST00000509388 F8VZ95 297 aa15.76■□□□□ 0.11
RNF4-213ENST00000509388 CYP26A1O43174 497 aa15.76■□□□□ 0.11
RNF4-213ENST00000509388 AP5Z1O43299 807 aa15.76■□□□□ 0.11
RNF4-213ENST00000509388 MED7O43513 233 aa15.76■□□□□ 0.11
RNF4-213ENST00000509388 EPCAMP16422 314 aa15.76■□□□□ 0.11
RNF4-213ENST00000509388 GNA15P30679 374 aa15.76■□□□□ 0.11
RNF4-213ENST00000509388 SOX5P35711 763 aa15.76■□□□□ 0.11
RNF4-213ENST00000509388 SLC8A3P57103 927 aa15.76■□□□□ 0.11
RNF4-213ENST00000509388 TRIM14Q14142 442 aa15.76■□□□□ 0.11
RNF4-213ENST00000509388 LILRA6Q6PI73 481 aa15.76■□□□□ 0.11
RNF4-213ENST00000509388 TMC6Q7Z403 805 aa15.76■□□□□ 0.11
RNF4-213ENST00000509388 EFHBQ8N7U6 833 aa15.76■□□□□ 0.11
RNF4-213ENST00000509388 C12orf29Q8N999 325 aa15.76■□□□□ 0.11
RNF4-213ENST00000509388 SLC2A14Q8TDB8 520 aa15.76■□□□□ 0.11
RNF4-213ENST00000509388 SLC22A17Q8WUG5 538 aa15.76■□□□□ 0.11
RNF4-213ENST00000509388 HDAC7Q8WUI4 952 aa15.76■□□□□ 0.11
RNF4-213ENST00000509388 MRFAP1L1Q96HT8 127 aa15.76■□□□□ 0.11
RNF4-213ENST00000509388 FUBP3Q96I24 572 aaKnown RBP eCLIP15.76■□□□□ 0.11
RNF4-213ENST00000509388 PKMYT1Q99640 499 aa15.76■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms