RNA–Protein interactions for RNA: ENST00000509297.5

SMAD5-205, Transcript of SMAD family member 5, humanhuman

TSL 1 (best)

Gene SMAD5, Length 854 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD5-205ENST00000509297 MYL7Q01449 175 aa16.57■□□□□ 0.24
SMAD5-205ENST00000509297 CCINQ13939 588 aa16.57■□□□□ 0.24
SMAD5-205ENST00000509297 ITPRIPL2Q3MIP1 535 aa16.57■□□□□ 0.24
SMAD5-205ENST00000509297 TXNDC11Q6PKC3 985 aa16.57■□□□□ 0.24
SMAD5-205ENST00000509297 DPH6Q7L8W6 267 aa16.57■□□□□ 0.24
SMAD5-205ENST00000509297 TOP6BLQ8N6T0 577 aa16.57■□□□□ 0.24
SMAD5-205ENST00000509297 ZSWIM2Q8NEG5 633 aa16.57■□□□□ 0.24
SMAD5-205ENST00000509297 GIPC2Q8TF65 315 aa16.57■□□□□ 0.24
SMAD5-205ENST00000509297 TRMT2BQ96GJ1 504 aaKnown RBP16.57■□□□□ 0.24
SMAD5-205ENST00000509297 ZFYVE19Q96K21 471 aa16.57■□□□□ 0.24
SMAD5-205ENST00000509297 MYRFLQ96LU7 910 aa16.57■□□□□ 0.24
SMAD5-205ENST00000509297 PKMYT1Q99640 499 aa16.57■□□□□ 0.24
SMAD5-205ENST00000509297 FAM83CQ9BQN1 747 aa16.57■□□□□ 0.24
SMAD5-205ENST00000509297 CUEDC2Q9H467 287 aa16.57■□□□□ 0.24
SMAD5-205ENST00000509297 KIF9Q9HAQ2 790 aa16.57■□□□□ 0.24
SMAD5-205ENST00000509297 TMLHEQ9NVH6 421 aa16.57■□□□□ 0.24
SMAD5-205ENST00000509297 KBTBD4Q9NVX7 518 aa16.57■□□□□ 0.24
SMAD5-205ENST00000509297 GTSE1Q9NYZ3 720 aa16.57■□□□□ 0.24
SMAD5-205ENST00000509297 PRR5-ARHGAP8B1AHC4 643 aa16.56■□□□□ 0.24
SMAD5-205ENST00000509297 GABRDO14764 452 aa16.56■□□□□ 0.24
SMAD5-205ENST00000509297 TGM1P22735 817 aa16.56■□□□□ 0.24
SMAD5-205ENST00000509297 AVPR1AP37288 418 aa16.56■□□□□ 0.24
SMAD5-205ENST00000509297 LHX1P48742 406 aa16.56■□□□□ 0.24
SMAD5-205ENST00000509297 ARHGAP8P85298 464 aa16.56■□□□□ 0.24
SMAD5-205ENST00000509297 SATB1Q01826 763 aa16.56■□□□□ 0.24
SMAD5-205ENST00000509297 LMNB2Q03252 620 aa16.56■□□□□ 0.24
SMAD5-205ENST00000509297 ZNF268Q14587 947 aaPredicted RBP16.56■□□□□ 0.24
SMAD5-205ENST00000509297 SURF1Q15526 300 aa16.56■□□□□ 0.24
SMAD5-205ENST00000509297 CFAP221Q4G0U5 840 aa16.56■□□□□ 0.24
SMAD5-205ENST00000509297 WDR44Q5JSH3 913 aa16.56■□□□□ 0.24
SMAD5-205ENST00000509297 INTS6LQ5JSJ4 861 aaKnown RBP16.56■□□□□ 0.24
SMAD5-205ENST00000509297 CNNM4Q6P4Q7 775 aa16.56■□□□□ 0.24
SMAD5-205ENST00000509297 DGLUCYQ7Z3D6 616 aa16.56■□□□□ 0.24
SMAD5-205ENST00000509297 LIMS2Q7Z4I7 341 aa16.56■□□□□ 0.24
SMAD5-205ENST00000509297 MON1AQ86VX9 555 aa16.56■□□□□ 0.24
SMAD5-205ENST00000509297 GPIHBP1Q8IV16 184 aa16.56■□□□□ 0.24
SMAD5-205ENST00000509297 GPD1LQ8N335 351 aa16.56■□□□□ 0.24
SMAD5-205ENST00000509297 CSGALNACT2Q8N6G5 542 aa16.56■□□□□ 0.24
SMAD5-205ENST00000509297 LINC00301Q8NCQ3 95 aa16.56■□□□□ 0.24
SMAD5-205ENST00000509297 FUBP3Q96I24 572 aaKnown RBP eCLIP16.56■□□□□ 0.24
SMAD5-205ENST00000509297 FGFBP2Q9BYJ0 223 aa16.56■□□□□ 0.24
SMAD5-205ENST00000509297 PANK2Q9BZ23 570 aa16.56■□□□□ 0.24
SMAD5-205ENST00000509297 DDX43Q9NXZ2 648 aaKnown RBP16.56■□□□□ 0.24
SMAD5-205ENST00000509297 UXTQ9UBK9 157 aaPredicted RBP16.56■□□□□ 0.24
SMAD5-205ENST00000509297 SIX4Q9UIU6 781 aa16.56■□□□□ 0.24
SMAD5-205ENST00000509297 KIF26AQ9ULI4 1882 aaPredicted RBP16.55■□□□□ 0.24
SMAD5-205ENST00000509297 K7ESF4 209 aa16.55■□□□□ 0.24
SMAD5-205ENST00000509297 LRP3O75074 770 aa16.55■□□□□ 0.24
SMAD5-205ENST00000509297 PPP6R2O75170 966 aa16.55■□□□□ 0.24
SMAD5-205ENST00000509297 PRPF40AO75400 957 aaKnown RBP16.55■□□□□ 0.24
SMAD5-205ENST00000509297 NOL4O94818 638 aa16.55■□□□□ 0.24
SMAD5-205ENST00000509297 PCSK1P29120 753 aa16.55■□□□□ 0.24
SMAD5-205ENST00000509297 E2F4Q16254 413 aa16.55■□□□□ 0.24
SMAD5-205ENST00000509297 LAIR1Q6GTX8 287 aa16.55■□□□□ 0.24
SMAD5-205ENST00000509297 MRPS31Q92665 395 aaKnown RBP16.55■□□□□ 0.24
SMAD5-205ENST00000509297 USP13Q92995 863 aaPredicted RBP16.55■□□□□ 0.24
SMAD5-205ENST00000509297 CEP295NLQ96MC4 621 aa16.55■□□□□ 0.24
SMAD5-205ENST00000509297 PI4K2AQ9BTU6 479 aa16.55■□□□□ 0.24
SMAD5-205ENST00000509297 KIAA1586Q9HCI6 787 aa16.55■□□□□ 0.24
SMAD5-205ENST00000509297 PDE11AQ9HCR9 933 aa16.55■□□□□ 0.24
SMAD5-205ENST00000509297 TDP1Q9NUW8 608 aa16.55■□□□□ 0.24
SMAD5-205ENST00000509297 INTS13Q9NVM9 706 aa16.55■□□□□ 0.24
SMAD5-205ENST00000509297 GMEB2Q9UKD1 530 aa16.55■□□□□ 0.24
SMAD5-205ENST00000509297 RAB23Q9ULC3 237 aa16.55■□□□□ 0.24
SMAD5-205ENST00000509297 SNX9Q9Y5X1 595 aa16.55■□□□□ 0.24
SMAD5-205ENST00000509297 TCHHQ07283 1943 aa16.55■□□□□ 0.24
SMAD5-205ENST00000509297 GOLGA8IPA6NC78 632 aa16.54■□□□□ 0.24
SMAD5-205ENST00000509297 ZNF233A6NK53 670 aa16.54■□□□□ 0.24
SMAD5-205ENST00000509297 GOLGA8JA6NMD2 632 aa16.54■□□□□ 0.24
SMAD5-205ENST00000509297 K7ELQ4 463 aaPredicted RBP16.54■□□□□ 0.24
SMAD5-205ENST00000509297 EIF3DO15371 548 aaKnown RBP eCLIP16.54■□□□□ 0.24
SMAD5-205ENST00000509297 PRPF6O94906 941 aaKnown RBP16.54■□□□□ 0.24
SMAD5-205ENST00000509297 TMEM191BP0C7N4 346 aa16.54■□□□□ 0.24
SMAD5-205ENST00000509297 PDIA4P13667 645 aaKnown RBP16.54■□□□□ 0.24
SMAD5-205ENST00000509297 MAGEA11P43364 429 aa16.54■□□□□ 0.24
SMAD5-205ENST00000509297 AMPD3Q01432 767 aa16.54■□□□□ 0.24
SMAD5-205ENST00000509297 AMPD2Q01433 879 aa16.54■□□□□ 0.24
SMAD5-205ENST00000509297 TNK2Q07912 1038 aa16.54■□□□□ 0.24
SMAD5-205ENST00000509297 BFSP1Q12934 665 aa16.54■□□□□ 0.24
SMAD5-205ENST00000509297 MYO1EQ12965 1108 aa16.54■□□□□ 0.24
SMAD5-205ENST00000509297 STK38Q15208 465 aa16.54■□□□□ 0.24
SMAD5-205ENST00000509297 SOWAHAQ2M3V2 549 aa16.54■□□□□ 0.24
SMAD5-205ENST00000509297 LONP2Q86WA8 852 aa16.54■□□□□ 0.24
SMAD5-205ENST00000509297 ADGRF2Q8IZF7 708 aa16.54■□□□□ 0.24
SMAD5-205ENST00000509297 PDILTQ8N807 584 aa16.54■□□□□ 0.24
SMAD5-205ENST00000509297 MAB21L3Q8N8X9 362 aa16.54■□□□□ 0.24
SMAD5-205ENST00000509297 ANKRD36BP1Q96IX9 119 aa16.54■□□□□ 0.24
SMAD5-205ENST00000509297 TRIM9Q9C026 710 aa16.54■□□□□ 0.24
SMAD5-205ENST00000509297 MTMR12Q9C0I1 747 aa16.54■□□□□ 0.24
SMAD5-205ENST00000509297 PCIF1Q9H4Z3 704 aa16.54■□□□□ 0.24
SMAD5-205ENST00000509297 GKN1Q9NS71 199 aa16.54■□□□□ 0.24
SMAD5-205ENST00000509297 RBM12Q9NTZ6 932 aaKnown RBP16.54■□□□□ 0.24
SMAD5-205ENST00000509297 NCOR2Q9Y618 2525 aa16.53■□□□□ 0.24
SMAD5-205ENST00000509297 SPTLC2O15270 562 aa16.53■□□□□ 0.24
SMAD5-205ENST00000509297 YEATS4O95619 227 aa16.53■□□□□ 0.24
SMAD5-205ENST00000509297 RETP07949 1114 aa16.53■□□□□ 0.24
SMAD5-205ENST00000509297 KRT19P08727 400 aa16.53■□□□□ 0.24
SMAD5-205ENST00000509297 CYP2F1P24903 491 aa16.53■□□□□ 0.24
SMAD5-205ENST00000509297 SNRPFP62306 86 aaKnown RBP16.53■□□□□ 0.24
SMAD5-205ENST00000509297 RUNX3Q13761 415 aa16.53■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms