RNA–Protein interactions for RNA: ENST00000509009.5

PDPN-208, Transcript of podoplanin, humanhuman

TSL 4 BASIC

Gene PDPN, Length 571 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-208ENST00000509009 LILRB5O75023 590 aa13.43□□□□□ -0.26
PDPN-208ENST00000509009 PRAMEF12O95522 483 aa13.43□□□□□ -0.26
PDPN-208ENST00000509009 TMEM191BP0C7N4 346 aa13.43□□□□□ -0.26
PDPN-208ENST00000509009 ACAT1P24752 427 aaKnown RBP13.43□□□□□ -0.26
PDPN-208ENST00000509009 CYP2F1P24903 491 aa13.43□□□□□ -0.26
PDPN-208ENST00000509009 SOX9P48436 509 aa13.43□□□□□ -0.26
PDPN-208ENST00000509009 LHX1P48742 406 aa13.43□□□□□ -0.26
PDPN-208ENST00000509009 GPR15P49685 360 aa13.43□□□□□ -0.26
PDPN-208ENST00000509009 KPNA1P52294 538 aaPredicted RBP13.43□□□□□ -0.26
PDPN-208ENST00000509009 NLRP12P59046 1061 aa13.43□□□□□ -0.26
PDPN-208ENST00000509009 ASIC1P78348 528 aa13.43□□□□□ -0.26
PDPN-208ENST00000509009 MYL7Q01449 175 aa13.43□□□□□ -0.26
PDPN-208ENST00000509009 SURF1Q15526 300 aa13.43□□□□□ -0.26
PDPN-208ENST00000509009 DDR2Q16832 855 aa13.43□□□□□ -0.26
PDPN-208ENST00000509009 DUOXA2Q1HG44 320 aa13.43□□□□□ -0.26
PDPN-208ENST00000509009 SOWAHAQ2M3V2 549 aa13.43□□□□□ -0.26
PDPN-208ENST00000509009 INTS6LQ5JSJ4 861 aaKnown RBP13.43□□□□□ -0.26
PDPN-208ENST00000509009 LMBRD2Q68DH5 695 aaPredicted RBP13.43□□□□□ -0.26
PDPN-208ENST00000509009 DPH6Q7L8W6 267 aa13.43□□□□□ -0.26
PDPN-208ENST00000509009 LIMS2Q7Z4I7 341 aa13.43□□□□□ -0.26
PDPN-208ENST00000509009 CMTM8Q8IZV2 173 aa13.43□□□□□ -0.26
PDPN-208ENST00000509009 DCLK2Q8N568 766 aa13.43□□□□□ -0.26
PDPN-208ENST00000509009 TOP6BLQ8N6T0 577 aa13.43□□□□□ -0.26
PDPN-208ENST00000509009 TTC8Q8TAM2 541 aa13.43□□□□□ -0.26
PDPN-208ENST00000509009 SPATA18Q8TC71 538 aa13.43□□□□□ -0.26
PDPN-208ENST00000509009 BPIFB1Q8TDL5 484 aa13.43□□□□□ -0.26
PDPN-208ENST00000509009 LEO1Q8WVC0 666 aaPredicted RBP13.43□□□□□ -0.26
PDPN-208ENST00000509009 RUBCNQ92622 972 aa13.43□□□□□ -0.26
PDPN-208ENST00000509009 ZFYVE19Q96K21 471 aa13.43□□□□□ -0.26
PDPN-208ENST00000509009 KIAA1586Q9HCI6 787 aa13.43□□□□□ -0.26
PDPN-208ENST00000509009 PRMT8Q9NR22 394 aaPredicted RBP13.43□□□□□ -0.26
PDPN-208ENST00000509009 GTSE1Q9NYZ3 720 aa13.43□□□□□ -0.26
PDPN-208ENST00000509009 HSPBP1Q9NZL4 362 aa13.43□□□□□ -0.26
PDPN-208ENST00000509009 PCDHA7Q9UN72 937 aa13.43□□□□□ -0.26
PDPN-208ENST00000509009 PCDHGA2Q9Y5H1 932 aa13.43□□□□□ -0.26
PDPN-208ENST00000509009 PTPRJQ12913 1337 aa13.42□□□□□ -0.26
PDPN-208ENST00000509009 CEP250Q9BV73 2442 aa13.42□□□□□ -0.26
PDPN-208ENST00000509009 MYBPHLA2RUH7 354 aa13.42□□□□□ -0.26
PDPN-208ENST00000509009 SLC38A8A6NNN8 435 aa13.42□□□□□ -0.26
PDPN-208ENST00000509009 SOBPA7XYQ1 873 aa13.42□□□□□ -0.26
PDPN-208ENST00000509009 F13A1P00488 732 aa13.42□□□□□ -0.26
PDPN-208ENST00000509009 TDGF1P13385 188 aa13.42□□□□□ -0.26
PDPN-208ENST00000509009 CASP1P29466 404 aa13.42□□□□□ -0.26
PDPN-208ENST00000509009 RPL10AP62906 217 aaKnown RBP13.42□□□□□ -0.26
PDPN-208ENST00000509009 EHHADHQ08426 723 aa13.42□□□□□ -0.26
PDPN-208ENST00000509009 MYO1EQ12965 1108 aa13.42□□□□□ -0.26
PDPN-208ENST00000509009 GAS6Q14393 721 aa13.42□□□□□ -0.26
PDPN-208ENST00000509009 FAM26FQ5R3K3 315 aa13.42□□□□□ -0.26
PDPN-208ENST00000509009 SDHAF4Q5VUM1 108 aa13.42□□□□□ -0.26
PDPN-208ENST00000509009 FAM171BQ6P995 826 aa13.42□□□□□ -0.26
PDPN-208ENST00000509009 TXNDC11Q6PKC3 985 aa13.42□□□□□ -0.26
PDPN-208ENST00000509009 CELF5Q8N6W0 485 aaKnown RBP13.42□□□□□ -0.26
PDPN-208ENST00000509009 MAB21L3Q8N8X9 362 aa13.42□□□□□ -0.26
PDPN-208ENST00000509009 RDH13Q8NBN7 331 aa13.42□□□□□ -0.26
PDPN-208ENST00000509009 SCFD1Q8WVM8 642 aa13.42□□□□□ -0.26
PDPN-208ENST00000509009 MSANTD3Q96H12 275 aa13.42□□□□□ -0.26
PDPN-208ENST00000509009 HPDLQ96IR7 371 aa13.42□□□□□ -0.26
PDPN-208ENST00000509009 ANKRD36BP1Q96IX9 119 aa13.42□□□□□ -0.26
PDPN-208ENST00000509009 GCNAQ96QF7 691 aa13.42□□□□□ -0.26
PDPN-208ENST00000509009 IER2Q9BTL4 223 aa13.42□□□□□ -0.26
PDPN-208ENST00000509009 FAM126AQ9BYI3 521 aaPredicted RBP13.42□□□□□ -0.26
PDPN-208ENST00000509009 SMG9Q9H0W8 520 aaKnown RBP13.42□□□□□ -0.26
PDPN-208ENST00000509009 ABCB6Q9NP58 842 aa13.42□□□□□ -0.26
PDPN-208ENST00000509009 GKN1Q9NS71 199 aa13.42□□□□□ -0.26
PDPN-208ENST00000509009 ZMYM5Q9UJ78 669 aa13.42□□□□□ -0.26
PDPN-208ENST00000509009 RCOR1Q9UKL0 485 aa13.42□□□□□ -0.26
PDPN-208ENST00000509009 R3HCC1Q9Y3T6 440 aaKnown RBP13.42□□□□□ -0.26
PDPN-208ENST00000509009 FANCMQ8IYD8 2048 aa13.42□□□□□ -0.26
PDPN-208ENST00000509009 DMXL1Q9Y485 3027 aa13.41□□□□□ -0.26
PDPN-208ENST00000509009 SPECC1L-ADORA2AF8WAN1 911 aa13.41□□□□□ -0.26
PDPN-208ENST00000509009 CLIC2O15247 247 aa13.41□□□□□ -0.26
PDPN-208ENST00000509009 HCRTO43612 131 aa13.41□□□□□ -0.26
PDPN-208ENST00000509009 ATP2C2O75185 946 aa13.41□□□□□ -0.26
PDPN-208ENST00000509009 CST3P01034 146 aaPredicted RBP13.41□□□□□ -0.26
PDPN-208ENST00000509009 TNNC2P02585 160 aa13.41□□□□□ -0.26
PDPN-208ENST00000509009 CSH1P0DML2 217 aa13.41□□□□□ -0.26
PDPN-208ENST00000509009 CSH2P0DML3 217 aa13.41□□□□□ -0.26
PDPN-208ENST00000509009 LMO2P25791 158 aa13.41□□□□□ -0.26
PDPN-208ENST00000509009 DDX6P26196 483 aaKnown RBP eCLIP13.41□□□□□ -0.26
PDPN-208ENST00000509009 PCSK1P29120 753 aa13.41□□□□□ -0.26
PDPN-208ENST00000509009 CTHP32929 405 aa13.41□□□□□ -0.26
PDPN-208ENST00000509009 SNRPFP62306 86 aaKnown RBP13.41□□□□□ -0.26
PDPN-208ENST00000509009 PLCB2Q00722 1185 aa13.41□□□□□ -0.26
PDPN-208ENST00000509009 TNK2Q07912 1038 aa13.41□□□□□ -0.26
PDPN-208ENST00000509009 CCDC142Q17RM4 750 aa13.41□□□□□ -0.26
PDPN-208ENST00000509009 WDR44Q5JSH3 913 aa13.41□□□□□ -0.26
PDPN-208ENST00000509009 RESP18Q5W5W9 173 aa13.41□□□□□ -0.26
PDPN-208ENST00000509009 TXNDC8Q6A555 127 aa13.41□□□□□ -0.26
PDPN-208ENST00000509009 ATL3Q6DD88 541 aa13.41□□□□□ -0.26
PDPN-208ENST00000509009 C1orf228Q6PIY5 440 aa13.41□□□□□ -0.26
PDPN-208ENST00000509009 UNC13DQ70J99 1090 aa13.41□□□□□ -0.26
PDPN-208ENST00000509009 TRAPPC11Q7Z392 1133 aa13.41□□□□□ -0.26
PDPN-208ENST00000509009 MON1AQ86VX9 555 aa13.41□□□□□ -0.26
PDPN-208ENST00000509009 RALGPS2Q86X27 583 aaPredicted RBP13.41□□□□□ -0.26
PDPN-208ENST00000509009 HSCBQ8IWL3 235 aa13.41□□□□□ -0.26
PDPN-208ENST00000509009 KIAA2013Q8IYS2 634 aa13.41□□□□□ -0.26
PDPN-208ENST00000509009 ADGRF2Q8IZF7 708 aa13.41□□□□□ -0.26
PDPN-208ENST00000509009 STKLD1Q8NE28 680 aa13.41□□□□□ -0.26
PDPN-208ENST00000509009 USP13Q92995 863 aaPredicted RBP13.41□□□□□ -0.26
PDPN-208ENST00000509009 MYRFLQ96LU7 910 aa13.41□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms