RNA–Protein interactions for RNA: ENST00000508848.5

POLR2J3-213, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 5

Gene POLR2J3, Length 1,030 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-213ENST00000508848 TRIM21P19474 475 aaKnown RBP11.32□□□□□ -0.6
POLR2J3-213ENST00000508848 GCLMP48507 274 aa11.32□□□□□ -0.6
POLR2J3-213ENST00000508848 MXI1P50539 228 aa11.32□□□□□ -0.6
POLR2J3-213ENST00000508848 ARPP19P56211 112 aa11.32□□□□□ -0.6
POLR2J3-213ENST00000508848 KLHL10Q6JEL2 608 aa11.32□□□□□ -0.6
POLR2J3-213ENST00000508848 MED15Q96RN5 788 aa11.32□□□□□ -0.6
POLR2J3-213ENST00000508848 SRRTQ9BXP5 876 aaKnown RBP11.32□□□□□ -0.6
POLR2J3-213ENST00000508848 LRRC3Q9BY71 257 aa11.32□□□□□ -0.6
POLR2J3-213ENST00000508848 SNX25Q9H3E2 840 aa11.32□□□□□ -0.6
POLR2J3-213ENST00000508848 THAP9Q9H5L6 903 aa11.32□□□□□ -0.6
POLR2J3-213ENST00000508848 CD320Q9NPF0 282 aa11.32□□□□□ -0.6
POLR2J3-213ENST00000508848 EHD2Q9NZN4 543 aa11.32□□□□□ -0.6
POLR2J3-213ENST00000508848 LETM1O95202 739 aaPredicted RBP11.31□□□□□ -0.6
POLR2J3-213ENST00000508848 RHOP08100 348 aa11.31□□□□□ -0.6
POLR2J3-213ENST00000508848 TRIM49P0CI25 452 aa11.31□□□□□ -0.6
POLR2J3-213ENST00000508848 TRIM49CP0CI26 452 aa11.31□□□□□ -0.6
POLR2J3-213ENST00000508848 CSH1P0DML2 217 aa11.31□□□□□ -0.6
POLR2J3-213ENST00000508848 CSH2P0DML3 217 aa11.31□□□□□ -0.6
POLR2J3-213ENST00000508848 PFKLP17858 780 aa11.31□□□□□ -0.6
POLR2J3-213ENST00000508848 PTPN1P18031 435 aaKnown RBP11.31□□□□□ -0.6
POLR2J3-213ENST00000508848 FSHRP23945 695 aa11.31□□□□□ -0.6
POLR2J3-213ENST00000508848 LMO2P25791 158 aa11.31□□□□□ -0.6
POLR2J3-213ENST00000508848 PIK3CAP42336 1068 aa11.31□□□□□ -0.6
POLR2J3-213ENST00000508848 FMO5P49326 533 aa11.31□□□□□ -0.6
POLR2J3-213ENST00000508848 PABPC1LQ4VXU2 614 aaKnown RBP11.31□□□□□ -0.6
POLR2J3-213ENST00000508848 SLC39A12Q504Y0 691 aa11.31□□□□□ -0.6
POLR2J3-213ENST00000508848 WDR44Q5JSH3 913 aa11.31□□□□□ -0.6
POLR2J3-213ENST00000508848 PRSS36Q5K4E3 855 aa11.31□□□□□ -0.6
POLR2J3-213ENST00000508848 CCDC183Q5T5S1 534 aa11.31□□□□□ -0.6
POLR2J3-213ENST00000508848 CYP4A22Q5TCH4 519 aa11.31□□□□□ -0.6
POLR2J3-213ENST00000508848 GRASPQ7Z6J2 395 aaPredicted RBP11.31□□□□□ -0.6
POLR2J3-213ENST00000508848 DNAJB7Q7Z6W7 309 aaPredicted RBP11.31□□□□□ -0.6
POLR2J3-213ENST00000508848 OSTM1Q86WC4 334 aa11.31□□□□□ -0.6
POLR2J3-213ENST00000508848 IRF2BP1Q8IU81 584 aa11.31□□□□□ -0.6
POLR2J3-213ENST00000508848 RNF135Q8IUD6 432 aa11.31□□□□□ -0.6
POLR2J3-213ENST00000508848 FAM114A1Q8IWE2 563 aa11.31□□□□□ -0.6
POLR2J3-213ENST00000508848 UBALD2Q8IYN6 164 aa11.31□□□□□ -0.6
POLR2J3-213ENST00000508848 TDRD5Q8NAT2 981 aaKnown RBP11.31□□□□□ -0.6
POLR2J3-213ENST00000508848 ENOX1Q8TC92 643 aaKnown RBP11.31□□□□□ -0.6
POLR2J3-213ENST00000508848 TAS1R2Q8TE23 839 aa11.31□□□□□ -0.6
POLR2J3-213ENST00000508848 E2F7Q96AV8 911 aa11.31□□□□□ -0.6
POLR2J3-213ENST00000508848 EEF2KMTQ96G04 330 aa11.31□□□□□ -0.6
POLR2J3-213ENST00000508848 TRMT2BQ96GJ1 504 aaKnown RBP11.31□□□□□ -0.6
POLR2J3-213ENST00000508848 FAM81BQ96LP2 452 aa11.31□□□□□ -0.6
POLR2J3-213ENST00000508848 TMEM209Q96SK2 561 aa11.31□□□□□ -0.6
POLR2J3-213ENST00000508848 SYT15Q9BQS2 421 aa11.31□□□□□ -0.6
POLR2J3-213ENST00000508848 MRPL45Q9BRJ2 306 aaKnown RBP11.31□□□□□ -0.6
POLR2J3-213ENST00000508848 NIF3L1Q9GZT8 377 aa11.31□□□□□ -0.6
POLR2J3-213ENST00000508848 CRISPLD1Q9H336 500 aa11.31□□□□□ -0.6
POLR2J3-213ENST00000508848 TRPV4Q9HBA0 871 aa11.31□□□□□ -0.6
POLR2J3-213ENST00000508848 ANO10Q9NW15 660 aa11.31□□□□□ -0.6
POLR2J3-213ENST00000508848 COMMD8Q9NX08 183 aa11.31□□□□□ -0.6
POLR2J3-213ENST00000508848 CEP72Q9P209 647 aa11.31□□□□□ -0.6
POLR2J3-213ENST00000508848 MAGEC2Q9UBF1 373 aaPredicted RBP11.31□□□□□ -0.6
POLR2J3-213ENST00000508848 NXF1Q9UBU9 619 aaKnown RBP11.31□□□□□ -0.6
POLR2J3-213ENST00000508848 GTF3C4Q9UKN8 822 aa11.31□□□□□ -0.6
POLR2J3-213ENST00000508848 CDH7Q9ULB5 785 aa11.31□□□□□ -0.6
POLR2J3-213ENST00000508848 KIAA1257Q9ULG3 409 aa11.31□□□□□ -0.6
POLR2J3-213ENST00000508848 YIPF1Q9Y548 306 aa11.31□□□□□ -0.6
POLR2J3-213ENST00000508848 ANAPC1Q9H1A4 1944 aa11.31□□□□□ -0.6
POLR2J3-213ENST00000508848 MYBPHLA2RUH7 354 aa11.3□□□□□ -0.6
POLR2J3-213ENST00000508848 CCL16O15467 120 aa11.3□□□□□ -0.6
POLR2J3-213ENST00000508848 OR4Q2P0C623 313 aa11.3□□□□□ -0.6
POLR2J3-213ENST00000508848 KCNA4P22459 653 aa11.3□□□□□ -0.6
POLR2J3-213ENST00000508848 TBXAS1P24557 533 aaPredicted RBP11.3□□□□□ -0.6
POLR2J3-213ENST00000508848 ASPAP45381 313 aa11.3□□□□□ -0.6
POLR2J3-213ENST00000508848 PPP3CCP48454 512 aa11.3□□□□□ -0.6
POLR2J3-213ENST00000508848 NOP14P78316 857 aaKnown RBP11.3□□□□□ -0.6
POLR2J3-213ENST00000508848 TWF1Q12792 350 aa11.3□□□□□ -0.6
POLR2J3-213ENST00000508848 KCNH2Q12809 1159 aa11.3□□□□□ -0.6
POLR2J3-213ENST00000508848 VEPH1Q14D04 833 aa11.3□□□□□ -0.6
POLR2J3-213ENST00000508848 CCDC40Q4G0X9 1142 aa11.3□□□□□ -0.6
POLR2J3-213ENST00000508848 CBWD6Q4V339 395 aa11.3□□□□□ -0.6
POLR2J3-213ENST00000508848 CBWD3Q5JTY5 395 aa11.3□□□□□ -0.6
POLR2J3-213ENST00000508848 CBWD5Q5RIA9 395 aa11.3□□□□□ -0.6
POLR2J3-213ENST00000508848 SPATA2LQ8IUW3 424 aaPredicted RBP11.3□□□□□ -0.6
POLR2J3-213ENST00000508848 B3GALNT2Q8NCR0 500 aa11.3□□□□□ -0.6
POLR2J3-213ENST00000508848 OR6B3Q8NGW1 331 aa11.3□□□□□ -0.6
POLR2J3-213ENST00000508848 LMO3Q8TAP4 145 aa11.3□□□□□ -0.6
POLR2J3-213ENST00000508848 FGF13Q92913 245 aa11.3□□□□□ -0.6
POLR2J3-213ENST00000508848 FAM84AQ96KN4 292 aa11.3□□□□□ -0.6
POLR2J3-213ENST00000508848 RPGRIP1Q96KN7 1286 aa11.3□□□□□ -0.6
POLR2J3-213ENST00000508848 C8orf48Q96LL4 319 aa11.3□□□□□ -0.6
POLR2J3-213ENST00000508848 APOL5Q9BWW9 433 aa11.3□□□□□ -0.6
POLR2J3-213ENST00000508848 ELOVL4Q9GZR5 314 aa11.3□□□□□ -0.6
POLR2J3-213ENST00000508848 DNAJC25Q9H1X3 360 aa11.3□□□□□ -0.6
POLR2J3-213ENST00000508848 CSNK1G1Q9HCP0 422 aa11.3□□□□□ -0.6
POLR2J3-213ENST00000508848 CRTAC1Q9NQ79 661 aa11.3□□□□□ -0.6
POLR2J3-213ENST00000508848 ASAH2Q9NR71 780 aa11.3□□□□□ -0.6
POLR2J3-213ENST00000508848 TMLHEQ9NVH6 421 aa11.3□□□□□ -0.6
POLR2J3-213ENST00000508848 UXTQ9UBK9 157 aaPredicted RBP11.3□□□□□ -0.6
POLR2J3-213ENST00000508848 CTNND2Q9UQB3 1225 aa11.3□□□□□ -0.6
POLR2J3-213ENST00000508848 UTP18Q9Y5J1 556 aaKnown RBP eCLIP11.3□□□□□ -0.6
POLR2J3-213ENST00000508848 LRRC10BA6NIK2 292 aa11.29□□□□□ -0.6
POLR2J3-213ENST00000508848 A8MXQ7 604 aa11.29□□□□□ -0.6
POLR2J3-213ENST00000508848 C2CD4DB7Z1M9 353 aa11.29□□□□□ -0.6
POLR2J3-213ENST00000508848 TRIM66O15016 1216 aa11.29□□□□□ -0.6
POLR2J3-213ENST00000508848 DCXO43602 365 aa11.29□□□□□ -0.6
POLR2J3-213ENST00000508848 GPR37L1O60883 481 aa11.29□□□□□ -0.6
POLR2J3-213ENST00000508848 CILPO75339 1184 aa11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms