RNA–Protein interactions for RNA: ENST00000508459.5

HMGCLL1-208, Transcript of 3-hydroxymethyl-3-methylglutaryl-CoA lyase like 1, humanhuman

TSL 2 BASIC

Gene HMGCLL1, Length 884 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCLL1-208ENST00000508459 KAT5Q92993 513 aa15.3■□□□□ 0.04
HMGCLL1-208ENST00000508459 CYFIP2Q96F07 1278 aa15.3■□□□□ 0.04
HMGCLL1-208ENST00000508459 HNRNPABQ99729 332 aaKnown RBP15.3■□□□□ 0.04
HMGCLL1-208ENST00000508459 GDF15Q99988 308 aa15.3■□□□□ 0.04
HMGCLL1-208ENST00000508459 MRPL45Q9BRJ2 306 aaKnown RBP15.3■□□□□ 0.04
HMGCLL1-208ENST00000508459 UBXN6Q9BZV1 441 aa15.3■□□□□ 0.04
HMGCLL1-208ENST00000508459 PNPLA8Q9NP80 782 aa15.3■□□□□ 0.04
HMGCLL1-208ENST00000508459 MRPL17Q9NRX2 175 aaKnown RBP15.3■□□□□ 0.04
HMGCLL1-208ENST00000508459 NAGPAQ9UK23 515 aa15.3■□□□□ 0.04
HMGCLL1-208ENST00000508459 MRPL42Q9Y6G3 142 aaKnown RBP15.3■□□□□ 0.04
HMGCLL1-208ENST00000508459 C5orf67F2Z3F1 127 aa15.29■□□□□ 0.04
HMGCLL1-208ENST00000508459 H2AFZP0C0S5 128 aa15.29■□□□□ 0.04
HMGCLL1-208ENST00000508459 CDH5P33151 784 aaPredicted RBP15.29■□□□□ 0.04
HMGCLL1-208ENST00000508459 BMPR1AP36894 532 aa15.29■□□□□ 0.04
HMGCLL1-208ENST00000508459 MAGEA1P43355 309 aa15.29■□□□□ 0.04
HMGCLL1-208ENST00000508459 EPHB4P54760 987 aa15.29■□□□□ 0.04
HMGCLL1-208ENST00000508459 TAP1Q03518 808 aa15.29■□□□□ 0.04
HMGCLL1-208ENST00000508459 BST2Q10589 180 aaKnown RBP15.29■□□□□ 0.04
HMGCLL1-208ENST00000508459 CTXN3Q4LDR2 81 aa15.29■□□□□ 0.04
HMGCLL1-208ENST00000508459 ARHGAP29Q52LW3 1261 aa15.29■□□□□ 0.04
HMGCLL1-208ENST00000508459 ZNF394Q53GI3 561 aa15.29■□□□□ 0.04
HMGCLL1-208ENST00000508459 INTS6LQ5JSJ4 861 aaKnown RBP15.29■□□□□ 0.04
HMGCLL1-208ENST00000508459 VARS2Q5ST30 1063 aaKnown RBP15.29■□□□□ 0.04
HMGCLL1-208ENST00000508459 TPGS2Q68CL5 300 aa15.29■□□□□ 0.04
HMGCLL1-208ENST00000508459 VSTM1Q6UX27 236 aa15.29■□□□□ 0.04
HMGCLL1-208ENST00000508459 H2AFVQ71UI9 128 aa15.29■□□□□ 0.04
HMGCLL1-208ENST00000508459 ZNF571Q7Z3V5 609 aaPredicted RBP15.29■□□□□ 0.04
HMGCLL1-208ENST00000508459 RHOT2Q8IXI1 618 aa15.29■□□□□ 0.04
HMGCLL1-208ENST00000508459 ANKRD52Q8NB46 1076 aa15.29■□□□□ 0.04
HMGCLL1-208ENST00000508459 C3orf58Q8NDZ4 430 aa15.29■□□□□ 0.04
HMGCLL1-208ENST00000508459 SPPL2BQ8TCT7 592 aa15.29■□□□□ 0.04
HMGCLL1-208ENST00000508459 SMARCD1Q96GM5 515 aa15.29■□□□□ 0.04
HMGCLL1-208ENST00000508459 TGS1Q96RS0 853 aaKnown RBP15.29■□□□□ 0.04
HMGCLL1-208ENST00000508459 PAAF1Q9BRP4 392 aa15.29■□□□□ 0.04
HMGCLL1-208ENST00000508459 MRPL47Q9HD33 250 aaKnown RBP15.29■□□□□ 0.04
HMGCLL1-208ENST00000508459 NGRNQ9NPE2 291 aaKnown RBP15.29■□□□□ 0.04
HMGCLL1-208ENST00000508459 WDR3Q9UNX4 943 aaKnown RBP eCLIP15.29■□□□□ 0.04
HMGCLL1-208ENST00000508459 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP15.29■□□□□ 0.04
HMGCLL1-208ENST00000508459 SCINQ9Y6U3 715 aa15.29■□□□□ 0.04
HMGCLL1-208ENST00000508459 ANKRD62A6NC57 917 aa15.28■□□□□ 0.04
HMGCLL1-208ENST00000508459 SOWAHDA6NJG2 315 aa15.28■□□□□ 0.04
HMGCLL1-208ENST00000508459 FAM200BP0CF97 657 aa15.28■□□□□ 0.04
HMGCLL1-208ENST00000508459 RAP1GAPP47736 663 aa15.28■□□□□ 0.04
HMGCLL1-208ENST00000508459 GATMP50440 423 aa15.28■□□□□ 0.04
HMGCLL1-208ENST00000508459 DSG1Q02413 1049 aa15.28■□□□□ 0.04
HMGCLL1-208ENST00000508459 CENPCQ03188 943 aa15.28■□□□□ 0.04
HMGCLL1-208ENST00000508459 MRPL58Q14197 206 aaKnown RBP15.28■□□□□ 0.04
HMGCLL1-208ENST00000508459 CLEC16AQ2KHT3 1053 aa15.28■□□□□ 0.04
HMGCLL1-208ENST00000508459 ASTE1Q2TB18 679 aaPredicted RBP15.28■□□□□ 0.04
HMGCLL1-208ENST00000508459 CFAP221Q4G0U5 840 aa15.28■□□□□ 0.04
HMGCLL1-208ENST00000508459 CCDC122Q5T0U0 273 aa15.28■□□□□ 0.04
HMGCLL1-208ENST00000508459 ACOT1Q86TX2 421 aa15.28■□□□□ 0.04
HMGCLL1-208ENST00000508459 NOP9Q86U38 636 aaKnown RBP15.28■□□□□ 0.04
HMGCLL1-208ENST00000508459 CEP57Q86XR8 500 aa15.28■□□□□ 0.04
HMGCLL1-208ENST00000508459 SPATA2LQ8IUW3 424 aaPredicted RBP15.28■□□□□ 0.04
HMGCLL1-208ENST00000508459 GLYCTKQ8IVS8 523 aa15.28■□□□□ 0.04
HMGCLL1-208ENST00000508459 RNF10Q8N5U6 811 aaKnown RBP15.28■□□□□ 0.04
HMGCLL1-208ENST00000508459 WHAMMQ8TF30 809 aa15.28■□□□□ 0.04
HMGCLL1-208ENST00000508459 DDX1Q92499 740 aaKnown RBP15.28■□□□□ 0.04
HMGCLL1-208ENST00000508459 PPP2R3CQ969Q6 453 aa15.28■□□□□ 0.04
HMGCLL1-208ENST00000508459 FAM84AQ96KN4 292 aa15.28■□□□□ 0.04
HMGCLL1-208ENST00000508459 CHP1Q99653 195 aa15.28■□□□□ 0.04
HMGCLL1-208ENST00000508459 MED10Q9BTT4 135 aa15.28■□□□□ 0.04
HMGCLL1-208ENST00000508459 EMILIN2Q9BXX0 1053 aa15.28■□□□□ 0.04
HMGCLL1-208ENST00000508459 LMAN2LQ9H0V9 348 aa15.28■□□□□ 0.04
HMGCLL1-208ENST00000508459 SDCBP2Q9H190 292 aa15.28■□□□□ 0.04
HMGCLL1-208ENST00000508459 ISCUQ9H1K1 167 aa15.28■□□□□ 0.04
HMGCLL1-208ENST00000508459 SYNCQ9H7C4 482 aa15.28■□□□□ 0.04
HMGCLL1-208ENST00000508459 CHST7Q9NS84 486 aa15.28■□□□□ 0.04
HMGCLL1-208ENST00000508459 MARCH5Q9NX47 278 aa15.28■□□□□ 0.04
HMGCLL1-208ENST00000508459 CXXC1Q9P0U4 656 aaPredicted RBP15.28■□□□□ 0.04
HMGCLL1-208ENST00000508459 FNIP2Q9P278 1114 aa15.28■□□□□ 0.04
HMGCLL1-208ENST00000508459 MYO1AQ9UBC5 1043 aa15.28■□□□□ 0.04
HMGCLL1-208ENST00000508459 AJAP1Q9UKB5 411 aaPredicted RBP15.28■□□□□ 0.04
HMGCLL1-208ENST00000508459 A0A0A6YYK5 440 aaPredicted RBP15.27■□□□□ 0.04
HMGCLL1-208ENST00000508459 BTNL10A8MVZ5 291 aa15.27■□□□□ 0.04
HMGCLL1-208ENST00000508459 O00370 1275 aa15.27■□□□□ 0.04
HMGCLL1-208ENST00000508459 TRIM66O15016 1216 aa15.27■□□□□ 0.04
HMGCLL1-208ENST00000508459 FGF18O76093 207 aa15.27■□□□□ 0.04
HMGCLL1-208ENST00000508459 CYP1A1P04798 512 aaPredicted RBP15.27■□□□□ 0.04
HMGCLL1-208ENST00000508459 CTNNB1P35222 781 aa15.27■□□□□ 0.04
HMGCLL1-208ENST00000508459 MAGEA11P43364 429 aa15.27■□□□□ 0.04
HMGCLL1-208ENST00000508459 BRCC3P46736 316 aa15.27■□□□□ 0.04
HMGCLL1-208ENST00000508459 TUFMP49411 452 aaKnown RBP15.27■□□□□ 0.04
HMGCLL1-208ENST00000508459 VAV2P52735 878 aa15.27■□□□□ 0.04
HMGCLL1-208ENST00000508459 FMO1Q01740 532 aa15.27■□□□□ 0.04
HMGCLL1-208ENST00000508459 ACAD10Q6JQN1 1059 aa15.27■□□□□ 0.04
HMGCLL1-208ENST00000508459 FAM171BQ6P995 826 aa15.27■□□□□ 0.04
HMGCLL1-208ENST00000508459 PHF13Q86YI8 300 aaPredicted RBP15.27■□□□□ 0.04
HMGCLL1-208ENST00000508459 RNF168Q8IYW5 571 aaPredicted RBP15.27■□□□□ 0.04
HMGCLL1-208ENST00000508459 TDHQ8IZJ6 230 aa15.27■□□□□ 0.04
HMGCLL1-208ENST00000508459 C1orf131Q8NDD1 294 aaKnown RBP15.27■□□□□ 0.04
HMGCLL1-208ENST00000508459 SLC30A5Q8TAD4 765 aa15.27■□□□□ 0.04
HMGCLL1-208ENST00000508459 HASPINQ8TF76 798 aa15.27■□□□□ 0.04
HMGCLL1-208ENST00000508459 HSFY1Q96LI6 401 aa15.27■□□□□ 0.04
HMGCLL1-208ENST00000508459 NCAPGQ9BPX3 1015 aa15.27■□□□□ 0.04
HMGCLL1-208ENST00000508459 SYT11Q9BT88 431 aa15.27■□□□□ 0.04
HMGCLL1-208ENST00000508459 ZCWPW1Q9H0M4 648 aa15.27■□□□□ 0.04
HMGCLL1-208ENST00000508459 UVRAGQ9P2Y5 699 aa15.27■□□□□ 0.04
HMGCLL1-208ENST00000508459 MTRRQ9UBK8 725 aa15.27■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms