RNA–Protein interactions for RNA: ENST00000508308.1

HMGN1P16-201, Transcript of high mobility group nucleosome binding domain 1 pseudogene 16, humanhuman

BASIC

Gene HMGN1P16, Length 283 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P16-201ENST00000508308 F11P03951 625 aa6.94□□□□□ -1.3
HMGN1P16-201ENST00000508308 PAX3P23760 479 aa6.94□□□□□ -1.3
HMGN1P16-201ENST00000508308 CTHP32929 405 aa6.94□□□□□ -1.3
HMGN1P16-201ENST00000508308 TAF6P49848 677 aa6.94□□□□□ -1.3
HMGN1P16-201ENST00000508308 CEBPZQ03701 1054 aaKnown RBP6.94□□□□□ -1.3
HMGN1P16-201ENST00000508308 SRSF5Q13243 272 aaKnown RBP6.94□□□□□ -1.3
HMGN1P16-201ENST00000508308 CCINQ13939 588 aa6.94□□□□□ -1.3
HMGN1P16-201ENST00000508308 SLC39A14Q15043 492 aa6.94□□□□□ -1.3
HMGN1P16-201ENST00000508308 RSPO4Q2I0M5 234 aaPredicted RBP6.94□□□□□ -1.3
HMGN1P16-201ENST00000508308 L1TD1Q5T7N2 865 aaKnown RBP6.94□□□□□ -1.3
HMGN1P16-201ENST00000508308 GPR158Q5T848 1215 aa6.94□□□□□ -1.3
HMGN1P16-201ENST00000508308 SLFN12LQ6IEE8 588 aa6.94□□□□□ -1.3
HMGN1P16-201ENST00000508308 ARMCX5Q6P1M9 558 aa6.94□□□□□ -1.3
HMGN1P16-201ENST00000508308 PKN3Q6P5Z2 889 aa6.94□□□□□ -1.3
HMGN1P16-201ENST00000508308 LIMS2Q7Z4I7 341 aa6.94□□□□□ -1.3
HMGN1P16-201ENST00000508308 OSTM1Q86WC4 334 aa6.94□□□□□ -1.3
HMGN1P16-201ENST00000508308 BRSK2Q8IWQ3 736 aa6.94□□□□□ -1.3
HMGN1P16-201ENST00000508308 PDCL2Q8N4E4 241 aa6.94□□□□□ -1.3
HMGN1P16-201ENST00000508308 SPEM1Q8N4L4 309 aa6.94□□□□□ -1.3
HMGN1P16-201ENST00000508308 KRI1Q8N9T8 703 aaKnown RBP6.94□□□□□ -1.3
HMGN1P16-201ENST00000508308 GIPC2Q8TF65 315 aa6.94□□□□□ -1.3
HMGN1P16-201ENST00000508308 POMGNT1Q8WZA1 660 aa6.94□□□□□ -1.3
HMGN1P16-201ENST00000508308 HPS3Q969F9 1004 aa6.94□□□□□ -1.3
HMGN1P16-201ENST00000508308 E2F7Q96AV8 911 aa6.94□□□□□ -1.3
HMGN1P16-201ENST00000508308 HVCN1Q96D96 273 aa6.94□□□□□ -1.3
HMGN1P16-201ENST00000508308 USP28Q96RU2 1077 aa6.94□□□□□ -1.3
HMGN1P16-201ENST00000508308 SEPT5Q99719 369 aaPredicted RBP6.94□□□□□ -1.3
HMGN1P16-201ENST00000508308 FAM83CQ9BQN1 747 aa6.94□□□□□ -1.3
HMGN1P16-201ENST00000508308 CBWD1Q9BRT8 395 aa6.94□□□□□ -1.3
HMGN1P16-201ENST00000508308 FAM213AQ9BRX8 229 aa6.94□□□□□ -1.3
HMGN1P16-201ENST00000508308 FAM126AQ9BYI3 521 aaPredicted RBP6.94□□□□□ -1.3
HMGN1P16-201ENST00000508308 ATXN3LQ9H3M9 355 aa6.94□□□□□ -1.3
HMGN1P16-201ENST00000508308 TASP1Q9H6P5 420 aa6.94□□□□□ -1.3
HMGN1P16-201ENST00000508308 HPS4Q9NQG7 708 aa6.94□□□□□ -1.3
HMGN1P16-201ENST00000508308 OLFML3Q9NRN5 406 aa6.94□□□□□ -1.3
HMGN1P16-201ENST00000508308 OBP2AQ9NY56 170 aa6.94□□□□□ -1.3
HMGN1P16-201ENST00000508308 SIX4Q9UIU6 781 aa6.94□□□□□ -1.3
HMGN1P16-201ENST00000508308 DSEQ9UL01 958 aa6.94□□□□□ -1.3
HMGN1P16-201ENST00000508308 L1RE1Q9UN81 338 aa6.94□□□□□ -1.3
HMGN1P16-201ENST00000508308 MTMR6Q9Y217 621 aa6.94□□□□□ -1.3
HMGN1P16-201ENST00000508308 MORC2Q9Y6X9 1032 aaPredicted RBP6.94□□□□□ -1.3
HMGN1P16-201ENST00000508308 EML5Q05BV3 1969 aa6.94□□□□□ -1.3
HMGN1P16-201ENST00000508308 ZNF638Q14966 1978 aaKnown RBP6.94□□□□□ -1.3
HMGN1P16-201ENST00000508308 PTPRJQ12913 1337 aa6.94□□□□□ -1.3
HMGN1P16-201ENST00000508308 SPAG17Q6Q759 2223 aa6.93□□□□□ -1.3
HMGN1P16-201ENST00000508308 RALGAPA1Q6GYQ0 2036 aa6.93□□□□□ -1.3
HMGN1P16-201ENST00000508308 CACNA1BQ00975 2339 aa6.93□□□□□ -1.3
HMGN1P16-201ENST00000508308 GOLGA8IPA6NC78 632 aa6.93□□□□□ -1.3
HMGN1P16-201ENST00000508308 GOLGA8JA6NMD2 632 aa6.93□□□□□ -1.3
HMGN1P16-201ENST00000508308 CHURC1-FNTBB4DL54 471 aa6.93□□□□□ -1.3
HMGN1P16-201ENST00000508308 WFS1O76024 890 aa6.93□□□□□ -1.3
HMGN1P16-201ENST00000508308 IL18RAPO95256 599 aa6.93□□□□□ -1.3
HMGN1P16-201ENST00000508308 PAPSS2O95340 614 aaPredicted RBP6.93□□□□□ -1.3
HMGN1P16-201ENST00000508308 ITGB3P05106 788 aa6.93□□□□□ -1.3
HMGN1P16-201ENST00000508308 GAP43P17677 238 aa6.93□□□□□ -1.3
HMGN1P16-201ENST00000508308 ACAT1P24752 427 aaKnown RBP6.93□□□□□ -1.3
HMGN1P16-201ENST00000508308 POLR2BP30876 1174 aaKnown RBP6.93□□□□□ -1.3
HMGN1P16-201ENST00000508308 ABCD1P33897 745 aa6.93□□□□□ -1.3
HMGN1P16-201ENST00000508308 CXCL12P48061 93 aa6.93□□□□□ -1.3
HMGN1P16-201ENST00000508308 FNTBP49356 437 aa6.93□□□□□ -1.3
HMGN1P16-201ENST00000508308 TUFMP49411 452 aaKnown RBP6.93□□□□□ -1.3
HMGN1P16-201ENST00000508308 CCR3P51677 355 aa6.93□□□□□ -1.3
HMGN1P16-201ENST00000508308 NLRP12P59046 1061 aa6.93□□□□□ -1.3
HMGN1P16-201ENST00000508308 PUM1Q14671 1186 aaKnown RBP eCLIP6.93□□□□□ -1.3
HMGN1P16-201ENST00000508308 PON2Q15165 354 aa6.93□□□□□ -1.3
HMGN1P16-201ENST00000508308 E2F4Q16254 413 aa6.93□□□□□ -1.3
HMGN1P16-201ENST00000508308 LPAL2Q16609 132 aa6.93□□□□□ -1.3
HMGN1P16-201ENST00000508308 DDR2Q16832 855 aa6.93□□□□□ -1.3
HMGN1P16-201ENST00000508308 MGAT5BQ3V5L5 792 aa6.93□□□□□ -1.3
HMGN1P16-201ENST00000508308 ARHGAP29Q52LW3 1261 aa6.93□□□□□ -1.3
HMGN1P16-201ENST00000508308 SDHAF4Q5VUM1 108 aa6.93□□□□□ -1.3
HMGN1P16-201ENST00000508308 RRAGBQ5VZM2 374 aa6.93□□□□□ -1.3
HMGN1P16-201ENST00000508308 NAIF1Q69YI7 327 aaPredicted RBP6.93□□□□□ -1.3
HMGN1P16-201ENST00000508308 SV2BQ7L1I2 683 aa6.93□□□□□ -1.3
HMGN1P16-201ENST00000508308 DGLUCYQ7Z3D6 616 aa6.93□□□□□ -1.3
HMGN1P16-201ENST00000508308 ITIH5Q86UX2 942 aa6.93□□□□□ -1.3
HMGN1P16-201ENST00000508308 RALGPS2Q86X27 583 aaPredicted RBP6.93□□□□□ -1.3
HMGN1P16-201ENST00000508308 YAF2Q8IY57 180 aa6.93□□□□□ -1.3
HMGN1P16-201ENST00000508308 CMTM8Q8IZV2 173 aa6.93□□□□□ -1.3
HMGN1P16-201ENST00000508308 THEM5Q8N1Q8 247 aa6.93□□□□□ -1.3
HMGN1P16-201ENST00000508308 OR5B17Q8NGF7 314 aa6.93□□□□□ -1.3
HMGN1P16-201ENST00000508308 RASSF8Q8NHQ8 419 aa6.93□□□□□ -1.3
HMGN1P16-201ENST00000508308 SPPL2BQ8TCT7 592 aa6.93□□□□□ -1.3
HMGN1P16-201ENST00000508308 BPIFB1Q8TDL5 484 aa6.93□□□□□ -1.3
HMGN1P16-201ENST00000508308 CSGALNACT1Q8TDX6 532 aa6.93□□□□□ -1.3
HMGN1P16-201ENST00000508308 C2orf15Q8WU43 125 aaKnown RBP6.93□□□□□ -1.3
HMGN1P16-201ENST00000508308 USP13Q92995 863 aaPredicted RBP6.93□□□□□ -1.3
HMGN1P16-201ENST00000508308 ACCSQ96QU6 501 aa6.93□□□□□ -1.3
HMGN1P16-201ENST00000508308 SLC22A12Q96S37 553 aa6.93□□□□□ -1.3
HMGN1P16-201ENST00000508308 HINFPQ9BQA5 517 aa6.93□□□□□ -1.3
HMGN1P16-201ENST00000508308 IER2Q9BTL4 223 aa6.93□□□□□ -1.3
HMGN1P16-201ENST00000508308 GZF1Q9H116 711 aaPredicted RBP6.93□□□□□ -1.3
HMGN1P16-201ENST00000508308 C8orf33Q9H7E9 229 aaPredicted RBP6.93□□□□□ -1.3
HMGN1P16-201ENST00000508308 MRPL44Q9H9J2 332 aaKnown RBP6.93□□□□□ -1.3
HMGN1P16-201ENST00000508308 FBRSL1Q9HCM7 1045 aaKnown RBP6.93□□□□□ -1.3
HMGN1P16-201ENST00000508308 PDE11AQ9HCR9 933 aa6.93□□□□□ -1.3
HMGN1P16-201ENST00000508308 GKN1Q9NS71 199 aa6.93□□□□□ -1.3
HMGN1P16-201ENST00000508308 POLR3BQ9NW08 1133 aaPredicted RBP6.93□□□□□ -1.3
HMGN1P16-201ENST00000508308 ABI2Q9NYB9 513 aaPredicted RBP6.93□□□□□ -1.3
HMGN1P16-201ENST00000508308 NCDNQ9UBB6 729 aa6.93□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms