RNA–Protein interactions for RNA: ENST00000508037.1

HMGB3P16-201, Transcript of high mobility group box 3 pseudogene 16, humanhuman

BASIC

Gene HMGB3P16, Length 287 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P16-201ENST00000508037 MXRA8Q9BRK3 442 aa5.23□□□□□ -1.57
HMGB3P16-201ENST00000508037 BTBD10Q9BSF8 475 aa5.23□□□□□ -1.57
HMGB3P16-201ENST00000508037 TRIM4Q9C037 500 aa5.23□□□□□ -1.57
HMGB3P16-201ENST00000508037 YIPF3Q9GZM5 350 aa5.23□□□□□ -1.57
HMGB3P16-201ENST00000508037 KIAA1683Q9H0B3 1180 aa5.23□□□□□ -1.57
HMGB3P16-201ENST00000508037 VCX3BQ9H321 246 aa5.23□□□□□ -1.57
HMGB3P16-201ENST00000508037 UNC45AQ9H3U1 944 aa5.23□□□□□ -1.57
HMGB3P16-201ENST00000508037 PCIF1Q9H4Z3 704 aa5.23□□□□□ -1.57
HMGB3P16-201ENST00000508037 PCDH9Q9HC56 1237 aa5.23□□□□□ -1.57
HMGB3P16-201ENST00000508037 MLXIPLQ9NP71 852 aa5.23□□□□□ -1.57
HMGB3P16-201ENST00000508037 PAPOLBQ9NRJ5 636 aaKnown RBP5.23□□□□□ -1.57
HMGB3P16-201ENST00000508037 ANKEF1Q9NU02 776 aa5.23□□□□□ -1.57
HMGB3P16-201ENST00000508037 TBC1D22BQ9NU19 505 aa5.23□□□□□ -1.57
HMGB3P16-201ENST00000508037 ETAA1Q9NY74 926 aa5.23□□□□□ -1.57
HMGB3P16-201ENST00000508037 DNAJB4Q9UDY4 337 aa5.23□□□□□ -1.57
HMGB3P16-201ENST00000508037 POLLQ9UGP5 575 aa5.23□□□□□ -1.57
HMGB3P16-201ENST00000508037 HAO1Q9UJM8 370 aa5.23□□□□□ -1.57
HMGB3P16-201ENST00000508037 IKBKGQ9Y6K9 419 aa5.23□□□□□ -1.57
HMGB3P16-201ENST00000508037 ATRNL1Q5VV63 1379 aa5.23□□□□□ -1.57
HMGB3P16-201ENST00000508037 COL2A1P02458 1487 aaPredicted RBP5.23□□□□□ -1.57
HMGB3P16-201ENST00000508037 NFASCO94856 1347 aa5.23□□□□□ -1.57
HMGB3P16-201ENST00000508037 IQANK1A0A1B0GTG1 560 aa5.22□□□□□ -1.57
HMGB3P16-201ENST00000508037 ANKRD33BA6NCL7 494 aa5.22□□□□□ -1.57
HMGB3P16-201ENST00000508037 UBAP1LF5GYI3 381 aa5.22□□□□□ -1.57
HMGB3P16-201ENST00000508037 POC1B-GALNT4F8VUJ3 575 aa5.22□□□□□ -1.57
HMGB3P16-201ENST00000508037 F8W8V4 182 aa5.22□□□□□ -1.57
HMGB3P16-201ENST00000508037 TP73O15350 636 aa5.22□□□□□ -1.57
HMGB3P16-201ENST00000508037 LIASO43766 372 aa5.22□□□□□ -1.57
HMGB3P16-201ENST00000508037 TYROBPO43914 113 aa5.22□□□□□ -1.57
HMGB3P16-201ENST00000508037 MAGEC1O60732 1142 aa5.22□□□□□ -1.57
HMGB3P16-201ENST00000508037 CFBP00751 764 aa5.22□□□□□ -1.57
HMGB3P16-201ENST00000508037 CYP1A1P04798 512 aaPredicted RBP5.22□□□□□ -1.57
HMGB3P16-201ENST00000508037 SERPINB2P05120 415 aa5.22□□□□□ -1.57
HMGB3P16-201ENST00000508037 CALB1P05937 261 aa5.22□□□□□ -1.57
HMGB3P16-201ENST00000508037 ITGAVP06756 1048 aa5.22□□□□□ -1.57
HMGB3P16-201ENST00000508037 RALAP11233 206 aa5.22□□□□□ -1.57
HMGB3P16-201ENST00000508037 BMP2P12643 396 aa5.22□□□□□ -1.57
HMGB3P16-201ENST00000508037 UNGP13051 313 aaPredicted RBP5.22□□□□□ -1.57
HMGB3P16-201ENST00000508037 CREB1P16220 341 aa5.22□□□□□ -1.57
HMGB3P16-201ENST00000508037 GARTP22102 1010 aa5.22□□□□□ -1.57
HMGB3P16-201ENST00000508037 RRM1P23921 792 aa5.22□□□□□ -1.57
HMGB3P16-201ENST00000508037 TBXAS1P24557 533 aaPredicted RBP5.22□□□□□ -1.57
HMGB3P16-201ENST00000508037 EPHB2P29323 1055 aa5.22□□□□□ -1.57
HMGB3P16-201ENST00000508037 SFNP31947 248 aa5.22□□□□□ -1.57
HMGB3P16-201ENST00000508037 SSR1P43307 286 aaKnown RBP5.22□□□□□ -1.57
HMGB3P16-201ENST00000508037 CRKP46108 304 aa5.22□□□□□ -1.57
HMGB3P16-201ENST00000508037 QARSP47897 775 aaKnown RBP5.22□□□□□ -1.57
HMGB3P16-201ENST00000508037 ARSEP51690 589 aa5.22□□□□□ -1.57
HMGB3P16-201ENST00000508037 ARFIP2P53365 341 aa5.22□□□□□ -1.57
HMGB3P16-201ENST00000508037 DLG4P78352 724 aa5.22□□□□□ -1.57
HMGB3P16-201ENST00000508037 AP1B1Q10567 949 aa5.22□□□□□ -1.57
HMGB3P16-201ENST00000508037 NFX1Q12986 1120 aaKnown RBP5.22□□□□□ -1.57
HMGB3P16-201ENST00000508037 TRIP13Q15645 432 aaPredicted RBP5.22□□□□□ -1.57
HMGB3P16-201ENST00000508037 HIF1AQ16665 826 aa5.22□□□□□ -1.57
HMGB3P16-201ENST00000508037 DNAL1Q4LDG9 190 aa5.22□□□□□ -1.57
HMGB3P16-201ENST00000508037 TAF1BQ53T94 588 aaPredicted RBP5.22□□□□□ -1.57
HMGB3P16-201ENST00000508037 EFHC2Q5JST6 749 aa5.22□□□□□ -1.57
HMGB3P16-201ENST00000508037 C1orf220Q5T0J3 134 aa5.22□□□□□ -1.57
HMGB3P16-201ENST00000508037 LGSNQ5TDP6 509 aa5.22□□□□□ -1.57
HMGB3P16-201ENST00000508037 PCNX4Q63HM2 1172 aa5.22□□□□□ -1.57
HMGB3P16-201ENST00000508037 APOBEC3HQ6NTF7 200 aaKnown RBP5.22□□□□□ -1.57
HMGB3P16-201ENST00000508037 TMEM154Q6P9G4 183 aa5.22□□□□□ -1.57
HMGB3P16-201ENST00000508037 ZNF449Q6P9G9 518 aa5.22□□□□□ -1.57
HMGB3P16-201ENST00000508037 LVRNQ6Q4G3 990 aa5.22□□□□□ -1.57
HMGB3P16-201ENST00000508037 B3GNT9Q6UX72 402 aa5.22□□□□□ -1.57
HMGB3P16-201ENST00000508037 TREML4Q6UXN2 200 aa5.22□□□□□ -1.57
HMGB3P16-201ENST00000508037 NSMFQ6X4W1 530 aa5.22□□□□□ -1.57
HMGB3P16-201ENST00000508037 LRRC74BQ6ZQY2 392 aa5.22□□□□□ -1.57
HMGB3P16-201ENST00000508037 OTOAQ7RTW8 1153 aa5.22□□□□□ -1.57
HMGB3P16-201ENST00000508037 CLNKQ7Z7G1 428 aa5.22□□□□□ -1.57
HMGB3P16-201ENST00000508037 CHSY1Q86X52 802 aa5.22□□□□□ -1.57
HMGB3P16-201ENST00000508037 PHF13Q86YI8 300 aaPredicted RBP5.22□□□□□ -1.57
HMGB3P16-201ENST00000508037 MCF2L2Q86YR7 1114 aa5.22□□□□□ -1.57
HMGB3P16-201ENST00000508037 KIAA0825Q8IV33 1275 aa5.22□□□□□ -1.57
HMGB3P16-201ENST00000508037 MAP4K3Q8IVH8 894 aa5.22□□□□□ -1.57
HMGB3P16-201ENST00000508037 KSR1Q8IVT5 923 aa5.22□□□□□ -1.57
HMGB3P16-201ENST00000508037 PPIL6Q8IXY8 311 aa5.22□□□□□ -1.57
HMGB3P16-201ENST00000508037 C4orf19Q8IY42 314 aa5.22□□□□□ -1.57
HMGB3P16-201ENST00000508037 KIRREL3Q8IZU9 778 aa5.22□□□□□ -1.57
HMGB3P16-201ENST00000508037 DAW1Q8N136 415 aa5.22□□□□□ -1.57
HMGB3P16-201ENST00000508037 MEIOBQ8N635 442 aa5.22□□□□□ -1.57
HMGB3P16-201ENST00000508037 ALLCQ8N6M5 410 aa5.22□□□□□ -1.57
HMGB3P16-201ENST00000508037 RDM1Q8NG50 284 aa5.22□□□□□ -1.57
HMGB3P16-201ENST00000508037 FEZF2Q8TBJ5 459 aa5.22□□□□□ -1.57
HMGB3P16-201ENST00000508037 RAB3IL1Q8TBN0 382 aa5.22□□□□□ -1.57
HMGB3P16-201ENST00000508037 PIP4K2CQ8TBX8 421 aa5.22□□□□□ -1.57
HMGB3P16-201ENST00000508037 CCDC110Q8TBZ0 833 aa5.22□□□□□ -1.57
HMGB3P16-201ENST00000508037 PARD3BQ8TEW8 1205 aa5.22□□□□□ -1.57
HMGB3P16-201ENST00000508037 ATG4AQ8WYN0 398 aa5.22□□□□□ -1.57
HMGB3P16-201ENST00000508037 DDX1Q92499 740 aaKnown RBP5.22□□□□□ -1.57
HMGB3P16-201ENST00000508037 ZNF75CPQ92670 426 aaPredicted RBP5.22□□□□□ -1.57
HMGB3P16-201ENST00000508037 NKD2Q969F2 451 aaPredicted RBP5.22□□□□□ -1.57
HMGB3P16-201ENST00000508037 SLC7A6OSQ96CW6 309 aaPredicted RBP5.22□□□□□ -1.57
HMGB3P16-201ENST00000508037 ZNF333Q96JL9 665 aa5.22□□□□□ -1.57
HMGB3P16-201ENST00000508037 C9orf72Q96LT7 481 aa5.22□□□□□ -1.57
HMGB3P16-201ENST00000508037 FGD4Q96M96 766 aa5.22□□□□□ -1.57
HMGB3P16-201ENST00000508037 MFSD14AQ96MC6 490 aa5.22□□□□□ -1.57
HMGB3P16-201ENST00000508037 KREMEN1Q96MU8 473 aa5.22□□□□□ -1.57
HMGB3P16-201ENST00000508037 GPR101Q96P66 508 aaPredicted RBP5.22□□□□□ -1.57
HMGB3P16-201ENST00000508037 OLFM3Q96PB7 478 aa5.22□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms