RNA–Protein interactions for RNA: ENST00000507597.5

USP53-203, Transcript of ubiquitin specific peptidase 53, humanhuman

TSL 3

Gene USP53, Length 503 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP53-203ENST00000507597 ADGRE1Q14246 886 aa21.36■■□□□ 1.01
USP53-203ENST00000507597 DRAP1Q14919 205 aaPredicted RBP21.36■■□□□ 1.01
USP53-203ENST00000507597 ZNF394Q53GI3 561 aa21.36■■□□□ 1.01
USP53-203ENST00000507597 SPECC1LQ69YQ0 1117 aa21.36■■□□□ 1.01
USP53-203ENST00000507597 FAM171BQ6P995 826 aa21.36■■□□□ 1.01
USP53-203ENST00000507597 ACOT1Q86TX2 421 aa21.36■■□□□ 1.01
USP53-203ENST00000507597 EFHBQ8N7U6 833 aa21.36■■□□□ 1.01
USP53-203ENST00000507597 SHC3Q92529 594 aa21.36■■□□□ 1.01
USP53-203ENST00000507597 KREMEN1Q96MU8 473 aa21.36■■□□□ 1.01
USP53-203ENST00000507597 ARID3AQ99856 593 aa21.36■■□□□ 1.01
USP53-203ENST00000507597 GANQ9H2C0 597 aa21.36■■□□□ 1.01
USP53-203ENST00000507597 IGFLR1Q9H665 355 aa21.36■■□□□ 1.01
USP53-203ENST00000507597 ABCB6Q9NP58 842 aa21.36■■□□□ 1.01
USP53-203ENST00000507597 CNTN6Q9UQ52 1028 aa21.36■■□□□ 1.01
USP53-203ENST00000507597 FHOD1Q9Y613 1164 aa21.36■■□□□ 1.01
USP53-203ENST00000507597 WDR27A2RRH5 827 aa21.35■■□□□ 1.01
USP53-203ENST00000507597 PRRG1O14668 218 aa21.35■■□□□ 1.01
USP53-203ENST00000507597 PER2O15055 1255 aa21.35■■□□□ 1.01
USP53-203ENST00000507597 TGM5O43548 720 aa21.35■■□□□ 1.01
USP53-203ENST00000507597 ACO1P21399 889 aaKnown RBP21.35■■□□□ 1.01
USP53-203ENST00000507597 CYP27A1Q02318 531 aa21.35■■□□□ 1.01
USP53-203ENST00000507597 ADCY1Q08828 1119 aa21.35■■□□□ 1.01
USP53-203ENST00000507597 TSR1Q2NL82 804 aaKnown RBP21.35■■□□□ 1.01
USP53-203ENST00000507597 SGO2Q562F6 1265 aa21.35■■□□□ 1.01
USP53-203ENST00000507597 GJB7Q6PEY0 223 aa21.35■■□□□ 1.01
USP53-203ENST00000507597 MICALL1Q8N3F8 863 aa21.35■■□□□ 1.01
USP53-203ENST00000507597 RBBP8NLQ8NC74 664 aaPredicted RBP21.35■■□□□ 1.01
USP53-203ENST00000507597 KREMEN2Q8NCW0 462 aa21.35■■□□□ 1.01
USP53-203ENST00000507597 MRFAP1L1Q96HT8 127 aa21.35■■□□□ 1.01
USP53-203ENST00000507597 MED10Q9BTT4 135 aa21.35■■□□□ 1.01
USP53-203ENST00000507597 NAA15Q9BXJ9 866 aaKnown RBP21.35■■□□□ 1.01
USP53-203ENST00000507597 ELOVL4Q9GZR5 314 aa21.35■■□□□ 1.01
USP53-203ENST00000507597 CD19P15391 556 aa21.34■■□□□ 1.01
USP53-203ENST00000507597 PBX1P40424 430 aa21.34■■□□□ 1.01
USP53-203ENST00000507597 ALDH1A3P47895 512 aa21.34■■□□□ 1.01
USP53-203ENST00000507597 RAD23BP54727 409 aa21.34■■□□□ 1.01
USP53-203ENST00000507597 PSMC1P62191 440 aaKnown RBP21.34■■□□□ 1.01
USP53-203ENST00000507597 RPL10AP62906 217 aaKnown RBP21.34■■□□□ 1.01
USP53-203ENST00000507597 CFAP221Q4G0U5 840 aa21.34■■□□□ 1.01
USP53-203ENST00000507597 MDH1BQ5I0G3 518 aa21.34■■□□□ 1.01
USP53-203ENST00000507597 LILRA6Q6PI73 481 aa21.34■■□□□ 1.01
USP53-203ENST00000507597 VSTM1Q6UX27 236 aa21.34■■□□□ 1.01
USP53-203ENST00000507597 RSPO2Q6UXX9 243 aaPredicted RBP21.34■■□□□ 1.01
USP53-203ENST00000507597 ADGRD2Q7Z7M1 963 aa21.34■■□□□ 1.01
USP53-203ENST00000507597 UBR7Q8N806 425 aa21.34■■□□□ 1.01
USP53-203ENST00000507597 ANP32BQ92688 251 aaKnown RBP21.34■■□□□ 1.01
USP53-203ENST00000507597 KAT5Q92993 513 aa21.34■■□□□ 1.01
USP53-203ENST00000507597 CYFIP2Q96F07 1278 aa21.34■■□□□ 1.01
USP53-203ENST00000507597 CYP4F11Q9HBI6 524 aa21.34■■□□□ 1.01
USP53-203ENST00000507597 NLRC4Q9NPP4 1024 aa21.34■■□□□ 1.01
USP53-203ENST00000507597 HESX1Q9UBX0 185 aa21.34■■□□□ 1.01
USP53-203ENST00000507597 PCDHGC5Q9Y5F6 944 aa21.34■■□□□ 1.01
USP53-203ENST00000507597 HCFC2Q9Y5Z7 792 aa21.34■■□□□ 1.01
USP53-203ENST00000507597 LAMA2P24043 3122 aaKnown RBP21.34■■□□□ 1.01
USP53-203ENST00000507597 A0A1W2PQJ5 194 aa21.33■■□□□ 1.01
USP53-203ENST00000507597 MYBPHLA2RUH7 354 aa21.33■■□□□ 1.01
USP53-203ENST00000507597 MTMR11A4FU01 709 aa21.33■■□□□ 1.01
USP53-203ENST00000507597 GOLGA6L6A8MZA4 724 aa21.33■■□□□ 1.01
USP53-203ENST00000507597 ADAM12O43184 909 aa21.33■■□□□ 1.01
USP53-203ENST00000507597 NOL4O94818 638 aa21.33■■□□□ 1.01
USP53-203ENST00000507597 OR4Q2P0C623 313 aa21.33■■□□□ 1.01
USP53-203ENST00000507597 HOXB8P17481 243 aaPredicted RBP21.33■■□□□ 1.01
USP53-203ENST00000507597 KLK7P49862 253 aa21.33■■□□□ 1.01
USP53-203ENST00000507597 HYAL1Q12794 435 aa21.33■■□□□ 1.01
USP53-203ENST00000507597 RNF19BQ6ZMZ0 732 aa21.33■■□□□ 1.01
USP53-203ENST00000507597 TCEAL8Q8IYN2 117 aa21.33■■□□□ 1.01
USP53-203ENST00000507597 ELMOD1Q8N336 334 aa21.33■■□□□ 1.01
USP53-203ENST00000507597 SLC4A11Q8NBS3 891 aa21.33■■□□□ 1.01
USP53-203ENST00000507597 WHAMMQ8TF30 809 aa21.33■■□□□ 1.01
USP53-203ENST00000507597 SLC22A17Q8WUG5 538 aa21.33■■□□□ 1.01
USP53-203ENST00000507597 CEP295NLQ96MC4 621 aa21.33■■□□□ 1.01
USP53-203ENST00000507597 GUCD1Q96NT3 240 aa21.33■■□□□ 1.01
USP53-203ENST00000507597 TMEM209Q96SK2 561 aa21.33■■□□□ 1.01
USP53-203ENST00000507597 ABI2Q9NYB9 513 aaPredicted RBP21.33■■□□□ 1.01
USP53-203ENST00000507597 FBXW11Q9UKB1 542 aa21.33■■□□□ 1.01
USP53-203ENST00000507597 COL4A4P53420 1690 aaPredicted RBP21.33■■□□□ 1
USP53-203ENST00000507597 VWA8A3KMH1 1905 aa21.33■■□□□ 1
USP53-203ENST00000507597 FOXN3O00409 490 aaPredicted RBP21.32■■□□□ 1
USP53-203ENST00000507597 TRIM66O15016 1216 aa21.32■■□□□ 1
USP53-203ENST00000507597 LRG1P02750 347 aa21.32■■□□□ 1
USP53-203ENST00000507597 ANXA13P27216 316 aa21.32■■□□□ 1
USP53-203ENST00000507597 SOX5P35711 763 aa21.32■■□□□ 1
USP53-203ENST00000507597 MAGEA11P43364 429 aa21.32■■□□□ 1
USP53-203ENST00000507597 MGAT5BQ3V5L5 792 aa21.32■■□□□ 1
USP53-203ENST00000507597 PPM1LQ5SGD2 360 aa21.32■■□□□ 1
USP53-203ENST00000507597 ARHGAP17Q68EM7 881 aa21.32■■□□□ 1
USP53-203ENST00000507597 DPY19L2P1Q6NXN4 242 aa21.32■■□□□ 1
USP53-203ENST00000507597 CYP26C1Q6V0L0 522 aa21.32■■□□□ 1
USP53-203ENST00000507597 TMEM184AQ6ZMB5 413 aa21.32■■□□□ 1
USP53-203ENST00000507597 LRRTM3Q86VH5 581 aa21.32■■□□□ 1
USP53-203ENST00000507597 VSTM4Q8IW00 320 aa21.32■■□□□ 1
USP53-203ENST00000507597 FAM71AQ8IYT1 594 aa21.32■■□□□ 1
USP53-203ENST00000507597 MYLPFQ96A32 169 aa21.32■■□□□ 1
USP53-203ENST00000507597 SMARCD1Q96GM5 515 aa21.32■■□□□ 1
USP53-203ENST00000507597 PCED1BQ96HM7 432 aa21.32■■□□□ 1
USP53-203ENST00000507597 PGLYRP2Q96PD5 576 aa21.32■■□□□ 1
USP53-203ENST00000507597 HNRNPABQ99729 332 aaKnown RBP21.32■■□□□ 1
USP53-203ENST00000507597 DPEP3Q9H4B8 488 aa21.32■■□□□ 1
USP53-203ENST00000507597 CRTAC1Q9NQ79 661 aa21.32■■□□□ 1
USP53-203ENST00000507597 MAN1C1Q9NR34 630 aa21.32■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms