RNA–Protein interactions for RNA: ENST00000507179.1

SKI-203, Transcript of SKI proto-oncogene, humanhuman

TSL 2

Gene SKI, Length 539 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKI-203ENST00000507179 ARHGAP29Q52LW3 1261 aa13.82□□□□□ -0.2
SKI-203ENST00000507179 TXNDC8Q6A555 127 aa13.82□□□□□ -0.2
SKI-203ENST00000507179 SYCP3Q8IZU3 236 aa13.82□□□□□ -0.2
SKI-203ENST00000507179 MAB21L3Q8N8X9 362 aa13.82□□□□□ -0.2
SKI-203ENST00000507179 BPIFB1Q8TDL5 484 aa13.82□□□□□ -0.2
SKI-203ENST00000507179 NOC3LQ8WTT2 800 aaKnown RBP13.82□□□□□ -0.2
SKI-203ENST00000507179 USP13Q92995 863 aaPredicted RBP13.82□□□□□ -0.2
SKI-203ENST00000507179 ZNF560Q96MR9 790 aa13.82□□□□□ -0.2
SKI-203ENST00000507179 FAM126AQ9BYI3 521 aaPredicted RBP13.82□□□□□ -0.2
SKI-203ENST00000507179 MTMR12Q9C0I1 747 aa13.82□□□□□ -0.2
SKI-203ENST00000507179 C8orf33Q9H7E9 229 aaPredicted RBP13.82□□□□□ -0.2
SKI-203ENST00000507179 GDAP2Q9NXN4 497 aa13.82□□□□□ -0.2
SKI-203ENST00000507179 DDX43Q9NXZ2 648 aaKnown RBP13.82□□□□□ -0.2
SKI-203ENST00000507179 DLL3Q9NYJ7 618 aa13.82□□□□□ -0.2
SKI-203ENST00000507179 MED19A0JLT2 244 aaPredicted RBP13.81□□□□□ -0.2
SKI-203ENST00000507179 K7ESF4 209 aa13.81□□□□□ -0.2
SKI-203ENST00000507179 DPYSL4O14531 572 aa13.81□□□□□ -0.2
SKI-203ENST00000507179 GABRDO14764 452 aa13.81□□□□□ -0.2
SKI-203ENST00000507179 HRO43593 1189 aa13.81□□□□□ -0.2
SKI-203ENST00000507179 ATP2C2O75185 946 aa13.81□□□□□ -0.2
SKI-203ENST00000507179 PRPF40AO75400 957 aaKnown RBP13.81□□□□□ -0.2
SKI-203ENST00000507179 CCR3P51677 355 aa13.81□□□□□ -0.2
SKI-203ENST00000507179 SRSF5Q13243 272 aaKnown RBP13.81□□□□□ -0.2
SKI-203ENST00000507179 CCINQ13939 588 aa13.81□□□□□ -0.2
SKI-203ENST00000507179 LPAL2Q16609 132 aa13.81□□□□□ -0.2
SKI-203ENST00000507179 SOWAHAQ2M3V2 549 aa13.81□□□□□ -0.2
SKI-203ENST00000507179 INTS6LQ5JSJ4 861 aaKnown RBP13.81□□□□□ -0.2
SKI-203ENST00000507179 TRIM68Q6AZZ1 485 aa13.81□□□□□ -0.2
SKI-203ENST00000507179 LIMS2Q7Z4I7 341 aa13.81□□□□□ -0.2
SKI-203ENST00000507179 RALGPS2Q86X27 583 aaPredicted RBP13.81□□□□□ -0.2
SKI-203ENST00000507179 CBWD2Q8IUF1 395 aa13.81□□□□□ -0.2
SKI-203ENST00000507179 DCP1BQ8IZD4 617 aaKnown RBP13.81□□□□□ -0.2
SKI-203ENST00000507179 SPEM1Q8N4L4 309 aa13.81□□□□□ -0.2
SKI-203ENST00000507179 LRRC52Q8N7C0 313 aa13.81□□□□□ -0.2
SKI-203ENST00000507179 LEO1Q8WVC0 666 aaPredicted RBP13.81□□□□□ -0.2
SKI-203ENST00000507179 FAM83CQ9BQN1 747 aa13.81□□□□□ -0.2
SKI-203ENST00000507179 ACBD6Q9BR61 282 aa13.81□□□□□ -0.2
SKI-203ENST00000507179 IER2Q9BTL4 223 aa13.81□□□□□ -0.2
SKI-203ENST00000507179 ZSCAN16Q9H4T2 348 aaPredicted RBP13.81□□□□□ -0.2
SKI-203ENST00000507179 PARD6AQ9NPB6 346 aa13.81□□□□□ -0.2
SKI-203ENST00000507179 HPS4Q9NQG7 708 aa13.81□□□□□ -0.2
SKI-203ENST00000507179 GKN1Q9NS71 199 aa13.81□□□□□ -0.2
SKI-203ENST00000507179 KBTBD4Q9NVX7 518 aa13.81□□□□□ -0.2
SKI-203ENST00000507179 NCDNQ9UBB6 729 aa13.81□□□□□ -0.2
SKI-203ENST00000507179 GTF3C4Q9UKN8 822 aa13.81□□□□□ -0.2
SKI-203ENST00000507179 ITGA11Q9UKX5 1188 aa13.81□□□□□ -0.2
SKI-203ENST00000507179 MAGED2Q9UNF1 606 aaPredicted RBP13.81□□□□□ -0.2
SKI-203ENST00000507179 SNX9Q9Y5X1 595 aa13.81□□□□□ -0.2
SKI-203ENST00000507179 CHURC1-FNTBB4DL54 471 aa13.8□□□□□ -0.2
SKI-203ENST00000507179 K7ELQ4 463 aaPredicted RBP13.8□□□□□ -0.2
SKI-203ENST00000507179 SPTLC2O15270 562 aa13.8□□□□□ -0.2
SKI-203ENST00000507179 HUS1O60921 280 aa13.8□□□□□ -0.2
SKI-203ENST00000507179 LDHAP00338 332 aaKnown RBP13.8□□□□□ -0.2
SKI-203ENST00000507179 KRT19P08727 400 aa13.8□□□□□ -0.2
SKI-203ENST00000507179 LMO2P25791 158 aa13.8□□□□□ -0.2
SKI-203ENST00000507179 CXCL12P48061 93 aa13.8□□□□□ -0.2
SKI-203ENST00000507179 FNTBP49356 437 aa13.8□□□□□ -0.2
SKI-203ENST00000507179 TSPY1Q01534 308 aa13.8□□□□□ -0.2
SKI-203ENST00000507179 ALCAMQ13740 583 aa13.8□□□□□ -0.2
SKI-203ENST00000507179 TAF12Q16514 161 aa13.8□□□□□ -0.2
SKI-203ENST00000507179 RSPO4Q2I0M5 234 aaPredicted RBP13.8□□□□□ -0.2
SKI-203ENST00000507179 NAIF1Q69YI7 327 aaPredicted RBP13.8□□□□□ -0.2
SKI-203ENST00000507179 PKN3Q6P5Z2 889 aa13.8□□□□□ -0.2
SKI-203ENST00000507179 SHC4Q6S5L8 630 aa13.8□□□□□ -0.2
SKI-203ENST00000507179 EPM2AIP1Q7L775 607 aaPredicted RBP13.8□□□□□ -0.2
SKI-203ENST00000507179 GPD1LQ8N335 351 aa13.8□□□□□ -0.2
SKI-203ENST00000507179 CELF5Q8N6W0 485 aaKnown RBP13.8□□□□□ -0.2
SKI-203ENST00000507179 CACTINQ8WUQ7 758 aaKnown RBP13.8□□□□□ -0.2
SKI-203ENST00000507179 KBTBD7Q8WVZ9 684 aa13.8□□□□□ -0.2
SKI-203ENST00000507179 MSANTD3Q96H12 275 aa13.8□□□□□ -0.2
SKI-203ENST00000507179 SLC22A12Q96S37 553 aa13.8□□□□□ -0.2
SKI-203ENST00000507179 TRIM9Q9C026 710 aa13.8□□□□□ -0.2
SKI-203ENST00000507179 TMEM206Q9H813 350 aa13.8□□□□□ -0.2
SKI-203ENST00000507179 INTS13Q9NVM9 706 aa13.8□□□□□ -0.2
SKI-203ENST00000507179 NUP210Q8TEM1 1887 aaPredicted RBP13.8□□□□□ -0.2
SKI-203ENST00000507179 CACNA1AO00555 2505 aa13.8□□□□□ -0.2
SKI-203ENST00000507179 TGFB1I1O43294 461 aa13.79□□□□□ -0.2
SKI-203ENST00000507179 ARSAP15289 507 aa13.79□□□□□ -0.2
SKI-203ENST00000507179 CASP1P29466 404 aa13.79□□□□□ -0.2
SKI-203ENST00000507179 RBP5P82980 135 aa13.79□□□□□ -0.2
SKI-203ENST00000507179 STK38Q15208 465 aa13.79□□□□□ -0.2
SKI-203ENST00000507179 NFE2Q16621 373 aaPredicted RBP13.79□□□□□ -0.2
SKI-203ENST00000507179 ITPRIPL2Q3MIP1 535 aa13.79□□□□□ -0.2
SKI-203ENST00000507179 FOXD4L5Q5VV16 416 aaPredicted RBP13.79□□□□□ -0.2
SKI-203ENST00000507179 HEATR6Q6AI08 1181 aaKnown RBP13.79□□□□□ -0.2
SKI-203ENST00000507179 FAM171BQ6P995 826 aa13.79□□□□□ -0.2
SKI-203ENST00000507179 DGLUCYQ7Z3D6 616 aa13.79□□□□□ -0.2
SKI-203ENST00000507179 MON1AQ86VX9 555 aa13.79□□□□□ -0.2
SKI-203ENST00000507179 CCDC65Q8IXS2 484 aa13.79□□□□□ -0.2
SKI-203ENST00000507179 ADGRF2Q8IZF7 708 aa13.79□□□□□ -0.2
SKI-203ENST00000507179 TMEM86AQ8N2M4 240 aa13.79□□□□□ -0.2
SKI-203ENST00000507179 TOP6BLQ8N6T0 577 aa13.79□□□□□ -0.2
SKI-203ENST00000507179 FOXD4L4Q8WXT5 416 aaPredicted RBP13.79□□□□□ -0.2
SKI-203ENST00000507179 MYRFLQ96LU7 910 aa13.79□□□□□ -0.2
SKI-203ENST00000507179 GCNAQ96QF7 691 aa13.79□□□□□ -0.2
SKI-203ENST00000507179 CYP2S1Q96SQ9 504 aa13.79□□□□□ -0.2
SKI-203ENST00000507179 TNMDQ9H2S6 317 aa13.79□□□□□ -0.2
SKI-203ENST00000507179 EBF3Q9H4W6 596 aa13.79□□□□□ -0.2
SKI-203ENST00000507179 FBRSL1Q9HCM7 1045 aaKnown RBP13.79□□□□□ -0.2
SKI-203ENST00000507179 ABCB6Q9NP58 842 aa13.79□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms