RNA–Protein interactions for RNA: ENST00000506690.1

SQSTM1-211, Transcript of sequestosome 1, humanhuman

TSL 2

Gene SQSTM1, Length 2,405 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-211ENST00000506690 CIB2O75838 187 aa17.95■□□□□ 0.46
SQSTM1-211ENST00000506690 KRT10P13645 584 aa17.95■□□□□ 0.46
SQSTM1-211ENST00000506690 KRT5P13647 590 aa17.95■□□□□ 0.46
SQSTM1-211ENST00000506690 SNRPFP62306 86 aaKnown RBP17.95■□□□□ 0.46
SQSTM1-211ENST00000506690 HIF1AQ16665 826 aa17.95■□□□□ 0.46
SQSTM1-211ENST00000506690 KLHL38Q2WGJ6 581 aa17.95■□□□□ 0.46
SQSTM1-211ENST00000506690 C6orf163Q5TEZ5 329 aa17.95■□□□□ 0.46
SQSTM1-211ENST00000506690 KRT27Q7Z3Y8 459 aa17.95■□□□□ 0.46
SQSTM1-211ENST00000506690 ADGRG6Q86SQ4 1221 aa17.95■□□□□ 0.46
SQSTM1-211ENST00000506690 ALYREFQ86V81 257 aaKnown RBP17.95■□□□□ 0.46
SQSTM1-211ENST00000506690 CBWD2Q8IUF1 395 aa17.95■□□□□ 0.46
SQSTM1-211ENST00000506690 ATP11CQ8NB49 1132 aa17.95■□□□□ 0.46
SQSTM1-211ENST00000506690 FBXL13Q8NEE6 735 aa17.95■□□□□ 0.46
SQSTM1-211ENST00000506690 TAS1R2Q8TE23 839 aa17.95■□□□□ 0.46
SQSTM1-211ENST00000506690 UNC45AQ9H3U1 944 aa17.95■□□□□ 0.46
SQSTM1-211ENST00000506690 EBF3Q9H4W6 596 aa17.95■□□□□ 0.46
SQSTM1-211ENST00000506690 RAB20Q9NX57 234 aa17.95■□□□□ 0.46
SQSTM1-211ENST00000506690 CNTN3Q9P232 1028 aa17.95■□□□□ 0.46
SQSTM1-211ENST00000506690 FAM237BA0A1B0GVD1 139 aa17.94■□□□□ 0.46
SQSTM1-211ENST00000506690 IMPDH2P12268 514 aa17.94■□□□□ 0.46
SQSTM1-211ENST00000506690 ATP2B4P23634 1241 aa17.94■□□□□ 0.46
SQSTM1-211ENST00000506690 GRM2Q14416 872 aa17.94■□□□□ 0.46
SQSTM1-211ENST00000506690 OASLQ15646 514 aaKnown RBP17.94■□□□□ 0.46
SQSTM1-211ENST00000506690 SNRNP35Q16560 246 aaKnown RBP17.94■□□□□ 0.46
SQSTM1-211ENST00000506690 B3GNT9Q6UX72 402 aa17.94■□□□□ 0.46
SQSTM1-211ENST00000506690 NME8Q8N427 588 aa17.94■□□□□ 0.46
SQSTM1-211ENST00000506690 TTC1Q99614 292 aa17.94■□□□□ 0.46
SQSTM1-211ENST00000506690 PREBQ9HCU5 417 aa17.94■□□□□ 0.46
SQSTM1-211ENST00000506690 FARP1Q9Y4F1 1045 aaPredicted RBP17.94■□□□□ 0.46
SQSTM1-211ENST00000506690 LPXNO60711 386 aa17.94■□□□□ 0.46
SQSTM1-211ENST00000506690 PIAS1O75925 651 aa17.94■□□□□ 0.46
SQSTM1-211ENST00000506690 BGNP21810 368 aa17.94■□□□□ 0.46
SQSTM1-211ENST00000506690 GJC1P36383 396 aa17.94■□□□□ 0.46
SQSTM1-211ENST00000506690 NSFP46459 744 aaKnown RBP17.94■□□□□ 0.46
SQSTM1-211ENST00000506690 GTF2BQ00403 316 aa17.94■□□□□ 0.46
SQSTM1-211ENST00000506690 SHROOM1Q2M3G4 852 aaPredicted RBP17.94■□□□□ 0.46
SQSTM1-211ENST00000506690 PDSS2Q86YH6 399 aa17.94■□□□□ 0.46
SQSTM1-211ENST00000506690 ELMO3Q96BJ8 720 aa17.94■□□□□ 0.46
SQSTM1-211ENST00000506690 CCDC127Q96BQ5 260 aa17.94■□□□□ 0.46
SQSTM1-211ENST00000506690 CLPTM1LQ96KA5 538 aa17.94■□□□□ 0.46
SQSTM1-211ENST00000506690 GALNT8Q9NY28 637 aa17.94■□□□□ 0.46
SQSTM1-211ENST00000506690 STRIP2Q9ULQ0 834 aa17.94■□□□□ 0.46
SQSTM1-211ENST00000506690 SMCHD1A6NHR9 2005 aa17.94■□□□□ 0.46
SQSTM1-211ENST00000506690 KLF11O14901 512 aa17.93■□□□□ 0.46
SQSTM1-211ENST00000506690 USP1O94782 785 aa17.93■□□□□ 0.46
SQSTM1-211ENST00000506690 HLA-DOAP06340 250 aa17.93■□□□□ 0.46
SQSTM1-211ENST00000506690 GRIA2P42262 883 aa17.93■□□□□ 0.46
SQSTM1-211ENST00000506690 HSF5Q4G112 596 aaPredicted RBP17.93■□□□□ 0.46
SQSTM1-211ENST00000506690 KAZNQ674X7 775 aa17.93■□□□□ 0.46
SQSTM1-211ENST00000506690 C3orf62Q6ZUJ4 267 aa17.93■□□□□ 0.46
SQSTM1-211ENST00000506690 RAPH1Q70E73 1250 aa17.93■□□□□ 0.46
SQSTM1-211ENST00000506690 ZNF677Q86XU0 584 aa17.93■□□□□ 0.46
SQSTM1-211ENST00000506690 SIAH1Q8IUQ4 282 aa17.93■□□□□ 0.46
SQSTM1-211ENST00000506690 RCOR2Q8IZ40 523 aa17.93■□□□□ 0.46
SQSTM1-211ENST00000506690 DDX55Q8NHQ9 600 aaKnown RBP eCLIP17.93■□□□□ 0.46
SQSTM1-211ENST00000506690 PYROXD1Q8WU10 500 aa17.93■□□□□ 0.46
SQSTM1-211ENST00000506690 SLITRK1Q96PX8 696 aa17.93■□□□□ 0.46
SQSTM1-211ENST00000506690 WDR83Q9BRX9 315 aaKnown RBP17.93■□□□□ 0.46
SQSTM1-211ENST00000506690 WDR11Q9BZH6 1224 aa17.93■□□□□ 0.46
SQSTM1-211ENST00000506690 PCDH9Q9HC56 1237 aa17.93■□□□□ 0.46
SQSTM1-211ENST00000506690 KCNK4Q9NYG8 393 aa17.93■□□□□ 0.46
SQSTM1-211ENST00000506690 E5RJQ4 531 aa17.93■□□□□ 0.46
SQSTM1-211ENST00000506690 GOLGA8SH3BPF8 625 aa17.93■□□□□ 0.46
SQSTM1-211ENST00000506690 GOLGA8MH3BSY2 632 aa17.93■□□□□ 0.46
SQSTM1-211ENST00000506690 FKBP6O75344 327 aa17.93■□□□□ 0.46
SQSTM1-211ENST00000506690 BAG2O95816 211 aa17.93■□□□□ 0.46
SQSTM1-211ENST00000506690 ENO1P06733 434 aaKnown RBP17.93■□□□□ 0.46
SQSTM1-211ENST00000506690 VCPP55072 806 aaKnown RBP17.93■□□□□ 0.46
SQSTM1-211ENST00000506690 GCNT1Q02742 428 aa17.93■□□□□ 0.46
SQSTM1-211ENST00000506690 MAMLD1Q13495 774 aa17.93■□□□□ 0.46
SQSTM1-211ENST00000506690 DNAL1Q4LDG9 190 aa17.93■□□□□ 0.46
SQSTM1-211ENST00000506690 MSS51Q4VC12 460 aa17.93■□□□□ 0.46
SQSTM1-211ENST00000506690 CFAP157Q5JU67 520 aa17.93■□□□□ 0.46
SQSTM1-211ENST00000506690 KYAT3Q6YP21 454 aaKnown RBP17.93■□□□□ 0.46
SQSTM1-211ENST00000506690 SH2D5Q6ZV89 423 aa17.93■□□□□ 0.46
SQSTM1-211ENST00000506690 RBM12BQ8IXT5 1001 aaKnown RBP17.93■□□□□ 0.46
SQSTM1-211ENST00000506690 OR6Y1Q8NGX8 325 aa17.93■□□□□ 0.46
SQSTM1-211ENST00000506690 SPIRE2Q8WWL2 714 aa17.93■□□□□ 0.46
SQSTM1-211ENST00000506690 HIC2Q96JB3 615 aa17.93■□□□□ 0.46
SQSTM1-211ENST00000506690 ST6GALNAC4Q9H4F1 302 aa17.93■□□□□ 0.46
SQSTM1-211ENST00000506690 KLHL11Q9NVR0 708 aa17.93■□□□□ 0.46
SQSTM1-211ENST00000506690 GGA1Q9UJY5 639 aa17.93■□□□□ 0.46
SQSTM1-211ENST00000506690 USTQ9Y2C2 406 aa17.93■□□□□ 0.46
SQSTM1-211ENST00000506690 RPS6KL1Q9Y6S9 549 aa17.93■□□□□ 0.46
SQSTM1-211ENST00000506690 PI4K2BG5E9Z4 385 aa17.92■□□□□ 0.46
SQSTM1-211ENST00000506690 ITGAVP06756 1048 aa17.92■□□□□ 0.46
SQSTM1-211ENST00000506690 INHBCP55103 352 aa17.92■□□□□ 0.46
SQSTM1-211ENST00000506690 ATP13A4Q4VNC1 1196 aa17.92■□□□□ 0.46
SQSTM1-211ENST00000506690 CIAPIN1Q6FI81 312 aa17.92■□□□□ 0.46
SQSTM1-211ENST00000506690 ENOSF1Q7L5Y1 443 aa17.92■□□□□ 0.46
SQSTM1-211ENST00000506690 HAUS6Q7Z4H7 955 aa17.92■□□□□ 0.46
SQSTM1-211ENST00000506690 SPATA24Q86W54 205 aa17.92■□□□□ 0.46
SQSTM1-211ENST00000506690 NKD2Q969F2 451 aaPredicted RBP17.92■□□□□ 0.46
SQSTM1-211ENST00000506690 APOPT1Q96IL0 206 aa17.92■□□□□ 0.46
SQSTM1-211ENST00000506690 FAM111AQ96PZ2 611 aa17.92■□□□□ 0.46
SQSTM1-211ENST00000506690 THTPAQ9BU02 230 aa17.92■□□□□ 0.46
SQSTM1-211ENST00000506690 EPB41L1Q9H4G0 881 aa17.92■□□□□ 0.46
SQSTM1-211ENST00000506690 C17orf75Q9HAS0 396 aa17.92■□□□□ 0.46
SQSTM1-211ENST00000506690 DNAAF2Q9NVR5 837 aaKnown RBP17.92■□□□□ 0.46
SQSTM1-211ENST00000506690 PCDHB2Q9Y5E7 798 aa17.92■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 54.1 ms