RNA–Protein interactions for RNA: ENST00000506233.5

SCLT1-207, Transcript of sodium channel and clathrin linker 1, humanhuman

TSL 2

Gene SCLT1, Length 3,673 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-207ENST00000506233 ISCUQ9H1K1 167 aa6.36□□□□□ -1.39
SCLT1-207ENST00000506233 RNF146Q9NTX7 359 aa6.36□□□□□ -1.39
SCLT1-207ENST00000506233 OBSL1O75147 1896 aa6.36□□□□□ -1.39
SCLT1-207ENST00000506233 TANC1Q9C0D5 1861 aa6.35□□□□□ -1.39
SCLT1-207ENST00000506233 EFCAB8A8MWE9 144 aa6.35□□□□□ -1.39
SCLT1-207ENST00000506233 FOXN3O00409 490 aaPredicted RBP6.35□□□□□ -1.39
SCLT1-207ENST00000506233 HTR3BO95264 441 aa6.35□□□□□ -1.39
SCLT1-207ENST00000506233 HADHBP55084 474 aaKnown RBP6.35□□□□□ -1.39
SCLT1-207ENST00000506233 ACTR2P61160 394 aa6.35□□□□□ -1.39
SCLT1-207ENST00000506233 TBC1D8BQ0IIM8 1120 aa6.35□□□□□ -1.39
SCLT1-207ENST00000506233 LIMS2Q7Z4I7 341 aa6.35□□□□□ -1.39
SCLT1-207ENST00000506233 PSPC1Q8WXF1 523 aaKnown RBP6.35□□□□□ -1.39
SCLT1-207ENST00000506233 RMDN3Q96TC7 470 aa6.35□□□□□ -1.39
SCLT1-207ENST00000506233 CRB3Q9BUF7 120 aa6.35□□□□□ -1.39
SCLT1-207ENST00000506233 TCF7L1Q9HCS4 588 aa6.35□□□□□ -1.39
SCLT1-207ENST00000506233 ADARB2Q9NS39 739 aaKnown RBP6.35□□□□□ -1.39
SCLT1-207ENST00000506233 TBX20Q9UMR3 447 aa6.35□□□□□ -1.39
SCLT1-207ENST00000506233 SNX12Q9UMY4 172 aa6.35□□□□□ -1.39
SCLT1-207ENST00000506233 TCRBV7S2A1N4TA0A589 114 aa6.35□□□□□ -1.39
SCLT1-207ENST00000506233 SLU7O95391 586 aaKnown RBP6.35□□□□□ -1.39
SCLT1-207ENST00000506233 MARCKSL1P49006 195 aa6.35□□□□□ -1.39
SCLT1-207ENST00000506233 CAPSQ13938 189 aa6.35□□□□□ -1.39
SCLT1-207ENST00000506233 HERC4Q5GLZ8 1057 aaPredicted RBP6.35□□□□□ -1.39
SCLT1-207ENST00000506233 MCTP2Q6DN12 878 aa6.35□□□□□ -1.39
SCLT1-207ENST00000506233 TRNP1Q6NT89 227 aa6.35□□□□□ -1.39
SCLT1-207ENST00000506233 RNF207Q6ZRF8 634 aa6.35□□□□□ -1.39
SCLT1-207ENST00000506233 PPFIBP1Q86W92 1011 aa6.35□□□□□ -1.39
SCLT1-207ENST00000506233 WHAMMQ8TF30 809 aa6.35□□□□□ -1.39
SCLT1-207ENST00000506233 ALG3Q92685 438 aa6.35□□□□□ -1.39
SCLT1-207ENST00000506233 ITPKCQ96DU7 683 aa6.35□□□□□ -1.39
SCLT1-207ENST00000506233 CALML4Q96GE6 196 aa6.35□□□□□ -1.39
SCLT1-207ENST00000506233 TRIM7Q9C029 511 aa6.35□□□□□ -1.39
SCLT1-207ENST00000506233 TAF1DQ9H5J8 278 aaPredicted RBP6.35□□□□□ -1.39
SCLT1-207ENST00000506233 CALCOCO1Q9P1Z2 691 aa6.35□□□□□ -1.39
SCLT1-207ENST00000506233 CDC23Q9UJX2 597 aa6.35□□□□□ -1.39
SCLT1-207ENST00000506233 PACSIN2Q9UNF0 486 aaPredicted RBP6.35□□□□□ -1.39
SCLT1-207ENST00000506233 DIS3Q9Y2L1 958 aaKnown RBP6.35□□□□□ -1.39
SCLT1-207ENST00000506233 NYNRINQ9P2P1 1898 aaKnown RBP6.35□□□□□ -1.39
SCLT1-207ENST00000506233 PASKQ96RG2 1323 aa6.35□□□□□ -1.39
SCLT1-207ENST00000506233 F5H423 210 aaPredicted RBP6.35□□□□□ -1.39
SCLT1-207ENST00000506233 BRINP1O60477 761 aa6.35□□□□□ -1.39
SCLT1-207ENST00000506233 FLOT1O75955 427 aa6.35□□□□□ -1.39
SCLT1-207ENST00000506233 CST3P01034 146 aaPredicted RBP6.35□□□□□ -1.39
SCLT1-207ENST00000506233 PGK2P07205 417 aa6.35□□□□□ -1.39
SCLT1-207ENST00000506233 CYP3A5P20815 502 aa6.35□□□□□ -1.39
SCLT1-207ENST00000506233 FLT3P36888 993 aa6.35□□□□□ -1.39
SCLT1-207ENST00000506233 TNFSF9P41273 254 aa6.35□□□□□ -1.39
SCLT1-207ENST00000506233 BFSP1Q12934 665 aa6.35□□□□□ -1.39
SCLT1-207ENST00000506233 TRIM61Q5EBN2 209 aa6.35□□□□□ -1.39
SCLT1-207ENST00000506233 TDRD10Q5VZ19 366 aaKnown RBP6.35□□□□□ -1.39
SCLT1-207ENST00000506233 MAATS1Q7Z4T9 603 aa6.35□□□□□ -1.39
SCLT1-207ENST00000506233 NT5DC3Q86UY8 548 aa6.35□□□□□ -1.39
SCLT1-207ENST00000506233 KIAA0319LQ8IZA0 1049 aa6.35□□□□□ -1.39
SCLT1-207ENST00000506233 BRI3BPQ8WY22 251 aa6.35□□□□□ -1.39
SCLT1-207ENST00000506233 APOL5Q9BWW9 433 aa6.35□□□□□ -1.39
SCLT1-207ENST00000506233 RNPEPQ9H4A4 650 aa6.35□□□□□ -1.39
SCLT1-207ENST00000506233 POLG2Q9UHN1 485 aa6.35□□□□□ -1.39
SCLT1-207ENST00000506233 MROH7Q68CQ1 1323 aa6.34□□□□□ -1.39
SCLT1-207ENST00000506233 C3orf70A6NLC5 250 aaPredicted RBP6.34□□□□□ -1.39
SCLT1-207ENST00000506233 C19orf81C9J6K1 198 aa6.34□□□□□ -1.39
SCLT1-207ENST00000506233 DDX39AO00148 427 aaKnown RBP6.34□□□□□ -1.39
SCLT1-207ENST00000506233 GLI1P08151 1106 aa6.34□□□□□ -1.39
SCLT1-207ENST00000506233 RBP3P10745 1247 aa6.34□□□□□ -1.39
SCLT1-207ENST00000506233 ALAS1P13196 640 aa6.34□□□□□ -1.39
SCLT1-207ENST00000506233 QARSP47897 775 aaKnown RBP6.34□□□□□ -1.39
SCLT1-207ENST00000506233 NLRP11P59045 1033 aaKnown RBP6.34□□□□□ -1.39
SCLT1-207ENST00000506233 ZRSR1Q15695 479 aaKnown RBP6.34□□□□□ -1.39
SCLT1-207ENST00000506233 UAP1Q16222 522 aaPredicted RBP6.34□□□□□ -1.39
SCLT1-207ENST00000506233 FAM153CQ494X1 144 aa6.34□□□□□ -1.39
SCLT1-207ENST00000506233 SV2CQ496J9 727 aa6.34□□□□□ -1.39
SCLT1-207ENST00000506233 GJC2Q5T442 439 aaPredicted RBP6.34□□□□□ -1.39
SCLT1-207ENST00000506233 SRGAP1Q7Z6B7 1085 aa6.34□□□□□ -1.39
SCLT1-207ENST00000506233 APOBEC3FQ8IUX4 373 aaKnown RBP6.34□□□□□ -1.39
SCLT1-207ENST00000506233 MSL3Q8N5Y2 521 aaKnown RBP6.34□□□□□ -1.39
SCLT1-207ENST00000506233 GSTCDQ8NEC7 633 aa6.34□□□□□ -1.39
SCLT1-207ENST00000506233 ZIC5Q96T25 663 aa6.34□□□□□ -1.39
SCLT1-207ENST00000506233 CCDC94Q9BW85 323 aaPredicted RBP6.34□□□□□ -1.39
SCLT1-207ENST00000506233 SPATC1LQ9H0A9 340 aa6.34□□□□□ -1.39
SCLT1-207ENST00000506233 PDCL3Q9H2J4 239 aa6.34□□□□□ -1.39
SCLT1-207ENST00000506233 NLRC4Q9NPP4 1024 aa6.34□□□□□ -1.39
SCLT1-207ENST00000506233 FAM153AQ9UHL3 310 aa6.34□□□□□ -1.39
SCLT1-207ENST00000506233 GPR52Q9Y2T5 361 aa6.34□□□□□ -1.39
SCLT1-207ENST00000506233 BICDL2A1A5D9 508 aa6.34□□□□□ -1.39
SCLT1-207ENST00000506233 GOLGA6L6A8MZA4 724 aa6.34□□□□□ -1.39
SCLT1-207ENST00000506233 MTA2O94776 668 aa6.34□□□□□ -1.39
SCLT1-207ENST00000506233 SOD2P04179 222 aa6.34□□□□□ -1.39
SCLT1-207ENST00000506233 SUPT20HL2P0C7V6 817 aa6.34□□□□□ -1.39
SCLT1-207ENST00000506233 TGFB3P10600 412 aa6.34□□□□□ -1.39
SCLT1-207ENST00000506233 TCF4P15884 667 aa6.34□□□□□ -1.39
SCLT1-207ENST00000506233 GPC3P51654 580 aa6.34□□□□□ -1.39
SCLT1-207ENST00000506233 ADCY2Q08462 1091 aa6.34□□□□□ -1.39
SCLT1-207ENST00000506233 SUPT20HL1Q3ZLR7 823 aa6.34□□□□□ -1.39
SCLT1-207ENST00000506233 OTOP3Q7RTS5 596 aa6.34□□□□□ -1.39
SCLT1-207ENST00000506233 SLC47A2Q86VL8 602 aa6.34□□□□□ -1.39
SCLT1-207ENST00000506233 SHC3Q92529 594 aa6.34□□□□□ -1.39
SCLT1-207ENST00000506233 KAT2BQ92831 832 aa6.34□□□□□ -1.39
SCLT1-207ENST00000506233 MRPL4Q9BYD3 311 aaKnown RBP6.34□□□□□ -1.39
SCLT1-207ENST00000506233 SDCBP2Q9H190 292 aa6.34□□□□□ -1.39
SCLT1-207ENST00000506233 IFT22Q9H7X7 185 aa6.34□□□□□ -1.39
SCLT1-207ENST00000506233 PARVGQ9HBI0 331 aa6.34□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms