RNA–Protein interactions for RNA: ENST00000505065.1

CDC42SE2-208, Transcript of CDC42 small effector 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42SE2, Length 4,352 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE2-208ENST00000505065 ZNF461Q8TAF7 563 aa8.84□□□□□ -0.99
CDC42SE2-208ENST00000505065 GDPD5Q8WTR4 605 aa8.84□□□□□ -0.99
CDC42SE2-208ENST00000505065 NT5C1BQ96P26 610 aa8.84□□□□□ -0.99
CDC42SE2-208ENST00000505065 TMEM209Q96SK2 561 aa8.84□□□□□ -0.99
CDC42SE2-208ENST00000505065 ZDHHC7Q9NXF8 308 aa8.84□□□□□ -0.99
CDC42SE2-208ENST00000505065 MAGEC2Q9UBF1 373 aaPredicted RBP8.84□□□□□ -0.99
CDC42SE2-208ENST00000505065 WDR3Q9UNX4 943 aaKnown RBP eCLIP8.84□□□□□ -0.99
CDC42SE2-208ENST00000505065 P4HA1P13674 534 aa8.84□□□□□ -0.99
CDC42SE2-208ENST00000505065 PLA2G4AP47712 749 aa8.84□□□□□ -0.99
CDC42SE2-208ENST00000505065 ROR1Q01973 937 aa8.84□□□□□ -0.99
CDC42SE2-208ENST00000505065 APBA1Q02410 837 aa8.84□□□□□ -0.99
CDC42SE2-208ENST00000505065 KRT17Q04695 432 aa8.84□□□□□ -0.99
CDC42SE2-208ENST00000505065 TMEM132AQ24JP5 1023 aa8.84□□□□□ -0.99
CDC42SE2-208ENST00000505065 DCAF17Q5H9S7 520 aaPredicted RBP8.84□□□□□ -0.99
CDC42SE2-208ENST00000505065 E4F1Q66K89 784 aaPredicted RBP8.84□□□□□ -0.99
CDC42SE2-208ENST00000505065 WDR59Q6PJI9 974 aa8.84□□□□□ -0.99
CDC42SE2-208ENST00000505065 FUKQ8N0W3 1084 aa8.84□□□□□ -0.99
CDC42SE2-208ENST00000505065 B3GALNT2Q8NCR0 500 aa8.84□□□□□ -0.99
CDC42SE2-208ENST00000505065 FAM193BQ96PV7 902 aaPredicted RBP8.84□□□□□ -0.99
CDC42SE2-208ENST00000505065 TADA2AO75478 443 aa8.84□□□□□ -0.99
CDC42SE2-208ENST00000505065 SCNN1AP37088 669 aa8.84□□□□□ -0.99
CDC42SE2-208ENST00000505065 MTIF2P46199 727 aaKnown RBP8.84□□□□□ -0.99
CDC42SE2-208ENST00000505065 RNASELQ05823 741 aaKnown RBP8.84□□□□□ -0.99
CDC42SE2-208ENST00000505065 PSMD5Q16401 504 aa8.84□□□□□ -0.99
CDC42SE2-208ENST00000505065 TPRNQ4KMQ1 711 aa8.84□□□□□ -0.99
CDC42SE2-208ENST00000505065 ZNF280DQ6N043 979 aa8.84□□□□□ -0.99
CDC42SE2-208ENST00000505065 WDTC1Q8N5D0 677 aa8.84□□□□□ -0.99
CDC42SE2-208ENST00000505065 TMEM176AQ96HP8 235 aa8.84□□□□□ -0.99
CDC42SE2-208ENST00000505065 DPEP3Q9H4B8 488 aa8.84□□□□□ -0.99
CDC42SE2-208ENST00000505065 NT5C1B-RDH14C9J2C7 533 aa8.84□□□□□ -0.99
CDC42SE2-208ENST00000505065 O00370 1275 aa8.84□□□□□ -0.99
CDC42SE2-208ENST00000505065 GFPT2O94808 682 aa8.84□□□□□ -0.99
CDC42SE2-208ENST00000505065 SEC24AO95486 1093 aa8.84□□□□□ -0.99
CDC42SE2-208ENST00000505065 PFKLP17858 780 aa8.84□□□□□ -0.99
CDC42SE2-208ENST00000505065 YWHAHQ04917 246 aaPredicted RBP8.84□□□□□ -0.99
CDC42SE2-208ENST00000505065 SYCP1Q15431 976 aa8.84□□□□□ -0.99
CDC42SE2-208ENST00000505065 FAM171A1Q5VUB5 890 aa8.84□□□□□ -0.99
CDC42SE2-208ENST00000505065 OVOS1Q6IE37 1185 aa8.84□□□□□ -0.99
CDC42SE2-208ENST00000505065 OVCA2Q8WZ82 227 aa8.84□□□□□ -0.99
CDC42SE2-208ENST00000505065 PABPC5Q96DU9 382 aaKnown RBP8.84□□□□□ -0.99
CDC42SE2-208ENST00000505065 TCF25Q9BQ70 676 aa8.84□□□□□ -0.99
CDC42SE2-208ENST00000505065 SLC28A3Q9HAS3 691 aa8.84□□□□□ -0.99
CDC42SE2-208ENST00000505065 ALG13Q9NP73 1137 aaKnown RBP8.84□□□□□ -0.99
CDC42SE2-208ENST00000505065 DZANK1Q9NVP4 752 aa8.84□□□□□ -0.99
CDC42SE2-208ENST00000505065 OLFM2O95897 454 aa8.83□□□□□ -1
CDC42SE2-208ENST00000505065 HNRNPA1P09651 372 aaKnown RBP eCLIP8.83□□□□□ -1
CDC42SE2-208ENST00000505065 UNGP13051 313 aaPredicted RBP8.83□□□□□ -1
CDC42SE2-208ENST00000505065 NDST1P52848 882 aa8.83□□□□□ -1
CDC42SE2-208ENST00000505065 YWHAEP62258 255 aaKnown RBP8.83□□□□□ -1
CDC42SE2-208ENST00000505065 CNGA2Q16280 664 aa8.83□□□□□ -1
CDC42SE2-208ENST00000505065 PM20D1Q6GTS8 502 aa8.83□□□□□ -1
CDC42SE2-208ENST00000505065 TMEM150AQ86TG1 271 aa8.83□□□□□ -1
CDC42SE2-208ENST00000505065 EPS8L1Q8TE68 723 aa8.83□□□□□ -1
CDC42SE2-208ENST00000505065 SLC35F5Q8WV83 523 aa8.83□□□□□ -1
CDC42SE2-208ENST00000505065 TMEM169Q96HH4 297 aa8.83□□□□□ -1
CDC42SE2-208ENST00000505065 CDX2Q99626 313 aaPredicted RBP8.83□□□□□ -1
CDC42SE2-208ENST00000505065 ZBED2Q9BTP6 218 aa8.83□□□□□ -1
CDC42SE2-208ENST00000505065 PLEKHA4Q9H4M7 779 aa8.83□□□□□ -1
CDC42SE2-208ENST00000505065 MRPL17Q9NRX2 175 aaKnown RBP8.83□□□□□ -1
CDC42SE2-208ENST00000505065 TGM5O43548 720 aa8.83□□□□□ -1
CDC42SE2-208ENST00000505065 HCRTO43612 131 aa8.83□□□□□ -1
CDC42SE2-208ENST00000505065 HMGA1P17096 107 aaKnown RBP8.83□□□□□ -1
CDC42SE2-208ENST00000505065 PTPN1P18031 435 aaKnown RBP8.83□□□□□ -1
CDC42SE2-208ENST00000505065 ATF6P18850 670 aa8.83□□□□□ -1
CDC42SE2-208ENST00000505065 SOX5P35711 763 aa8.83□□□□□ -1
CDC42SE2-208ENST00000505065 MFAP3P55082 362 aa8.83□□□□□ -1
CDC42SE2-208ENST00000505065 STILQ15468 1287 aa8.83□□□□□ -1
CDC42SE2-208ENST00000505065 PTPROQ16827 1216 aa8.83□□□□□ -1
CDC42SE2-208ENST00000505065 WDR72Q3MJ13 1102 aa8.83□□□□□ -1
CDC42SE2-208ENST00000505065 POTEHQ6S545 545 aa8.83□□□□□ -1
CDC42SE2-208ENST00000505065 VSTM1Q6UX27 236 aa8.83□□□□□ -1
CDC42SE2-208ENST00000505065 RNF19BQ6ZMZ0 732 aa8.83□□□□□ -1
CDC42SE2-208ENST00000505065 RNF169Q8NCN4 708 aa8.83□□□□□ -1
CDC42SE2-208ENST00000505065 SPPL2BQ8TCT7 592 aa8.83□□□□□ -1
CDC42SE2-208ENST00000505065 TFAP2BQ92481 460 aa8.83□□□□□ -1
CDC42SE2-208ENST00000505065 VPS16Q9H269 839 aa8.83□□□□□ -1
CDC42SE2-208ENST00000505065 IMPACTQ9P2X3 320 aa8.83□□□□□ -1
CDC42SE2-208ENST00000505065 CBFA2T2O43439 604 aa8.83□□□□□ -1
CDC42SE2-208ENST00000505065 MOSPD3O75425 235 aa8.83□□□□□ -1
CDC42SE2-208ENST00000505065 VDRP11473 427 aa8.83□□□□□ -1
CDC42SE2-208ENST00000505065 MAPRE1Q15691 268 aaKnown RBP8.83□□□□□ -1
CDC42SE2-208ENST00000505065 ZNF697Q5TEC3 545 aa8.83□□□□□ -1
CDC42SE2-208ENST00000505065 RNF43Q68DV7 783 aa8.83□□□□□ -1
CDC42SE2-208ENST00000505065 GJB7Q6PEY0 223 aa8.83□□□□□ -1
CDC42SE2-208ENST00000505065 SLC4A5Q9BY07 1137 aa8.83□□□□□ -1
CDC42SE2-208ENST00000505065 DDX43Q9NXZ2 648 aaKnown RBP8.83□□□□□ -1
CDC42SE2-208ENST00000505065 DNAJC12Q9UKB3 198 aa8.83□□□□□ -1
CDC42SE2-208ENST00000505065 MIA3Q5JRA6 1907 aa8.83□□□□□ -1
CDC42SE2-208ENST00000505065 PCSK1P29120 753 aa8.82□□□□□ -1
CDC42SE2-208ENST00000505065 RAP1GAPP47736 663 aa8.82□□□□□ -1
CDC42SE2-208ENST00000505065 CACNA2D1P54289 1103 aa8.82□□□□□ -1
CDC42SE2-208ENST00000505065 PRSS55Q6UWB4 352 aaPredicted RBP8.82□□□□□ -1
CDC42SE2-208ENST00000505065 FMNL3Q8IVF7 1028 aa8.82□□□□□ -1
CDC42SE2-208ENST00000505065 NUCKS1Q9H1E3 243 aaKnown RBP8.82□□□□□ -1
CDC42SE2-208ENST00000505065 IFNKQ9P0W0 207 aa8.82□□□□□ -1
CDC42SE2-208ENST00000505065 SNX9Q9Y5X1 595 aa8.82□□□□□ -1
CDC42SE2-208ENST00000505065 I3L4J1 428 aa8.82□□□□□ -1
CDC42SE2-208ENST00000505065 HUS1O60921 280 aa8.82□□□□□ -1
CDC42SE2-208ENST00000505065 GNL1P36915 607 aaPredicted RBP8.82□□□□□ -1
CDC42SE2-208ENST00000505065 CDH8P55286 799 aa8.82□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms