RNA–Protein interactions for RNA: ENST00000504974.1

RFC1-209, Transcript of replication factor C subunit 1, humanhuman

TSL 5

Gene RFC1, Length 495 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-209ENST00000504974 HESX1Q9UBX0 185 aa3.91□□□□□ -1.78
RFC1-209ENST00000504974 KCNE5Q9UJ90 142 aa3.91□□□□□ -1.78
RFC1-209ENST00000504974 DAAM1Q9Y4D1 1078 aa3.91□□□□□ -1.78
RFC1-209ENST00000504974 URB2Q14146 1524 aaKnown RBP3.9□□□□□ -1.78
RFC1-209ENST00000504974 GAGE12BA1L429 117 aa3.9□□□□□ -1.79
RFC1-209ENST00000504974 TRIM43BA6NCK2 446 aa3.9□□□□□ -1.79
RFC1-209ENST00000504974 GAGE12HA6NDE8 117 aa3.9□□□□□ -1.79
RFC1-209ENST00000504974 F5H697 171 aa3.9□□□□□ -1.79
RFC1-209ENST00000504974 PYCARD-AS1I3L0S3 204 aa3.9□□□□□ -1.79
RFC1-209ENST00000504974 NCK2O43639 380 aa3.9□□□□□ -1.79
RFC1-209ENST00000504974 LPXNO60711 386 aa3.9□□□□□ -1.79
RFC1-209ENST00000504974 CDKL5O76039 1030 aa3.9□□□□□ -1.79
RFC1-209ENST00000504974 SUN1O94901 812 aa3.9□□□□□ -1.79
RFC1-209ENST00000504974 IL18RAPO95256 599 aa3.9□□□□□ -1.79
RFC1-209ENST00000504974 RPL17P18621 184 aaKnown RBP3.9□□□□□ -1.79
RFC1-209ENST00000504974 ITGALP20701 1170 aa3.9□□□□□ -1.79
RFC1-209ENST00000504974 TNFSF4P23510 183 aa3.9□□□□□ -1.79
RFC1-209ENST00000504974 GCLCP48506 637 aaPredicted RBP3.9□□□□□ -1.79
RFC1-209ENST00000504974 ITGA8P53708 1063 aa3.9□□□□□ -1.79
RFC1-209ENST00000504974 LILRA4P59901 499 aa3.9□□□□□ -1.79
RFC1-209ENST00000504974 SATB1Q01826 763 aa3.9□□□□□ -1.79
RFC1-209ENST00000504974 KRT17Q04695 432 aa3.9□□□□□ -1.79
RFC1-209ENST00000504974 ZNF543Q08ER8 600 aa3.9□□□□□ -1.79
RFC1-209ENST00000504974 DAG1Q14118 895 aa3.9□□□□□ -1.79
RFC1-209ENST00000504974 BOP1Q14137 746 aaKnown RBP3.9□□□□□ -1.79
RFC1-209ENST00000504974 BEAN1Q3B7T3 259 aa3.9□□□□□ -1.79
RFC1-209ENST00000504974 TMEM108Q6UXF1 575 aa3.9□□□□□ -1.79
RFC1-209ENST00000504974 LRRC55Q6ZSA7 311 aa3.9□□□□□ -1.79
RFC1-209ENST00000504974 PPP1R32Q7Z5V6 425 aa3.9□□□□□ -1.79
RFC1-209ENST00000504974 MORC1Q86VD1 984 aa3.9□□□□□ -1.79
RFC1-209ENST00000504974 MICU3Q86XE3 530 aa3.9□□□□□ -1.79
RFC1-209ENST00000504974 VPS37AQ8NEZ2 397 aa3.9□□□□□ -1.79
RFC1-209ENST00000504974 OR56A3Q8NH54 315 aa3.9□□□□□ -1.79
RFC1-209ENST00000504974 SNX19Q92543 992 aa3.9□□□□□ -1.79
RFC1-209ENST00000504974 TRIM43Q96BQ3 446 aaPredicted RBP3.9□□□□□ -1.79
RFC1-209ENST00000504974 RIPOR3Q96MK2 946 aa3.9□□□□□ -1.79
RFC1-209ENST00000504974 MOGAT1Q96PD6 335 aa3.9□□□□□ -1.79
RFC1-209ENST00000504974 SPATA5L1Q9BVQ7 753 aa3.9□□□□□ -1.79
RFC1-209ENST00000504974 UNKQ9C0B0 810 aaKnown RBP3.9□□□□□ -1.79
RFC1-209ENST00000504974 NRDE2Q9H7Z3 1164 aa3.9□□□□□ -1.79
RFC1-209ENST00000504974 NLRC4Q9NPP4 1024 aa3.9□□□□□ -1.79
RFC1-209ENST00000504974 A1CFQ9NQ94 594 aaKnown RBP3.9□□□□□ -1.79
RFC1-209ENST00000504974 TBC1D23Q9NUY8 699 aa3.9□□□□□ -1.79
RFC1-209ENST00000504974 ZSCAN32Q9NX65 697 aa3.9□□□□□ -1.79
RFC1-209ENST00000504974 FNIP2Q9P278 1114 aa3.9□□□□□ -1.79
RFC1-209ENST00000504974 CTTNBP2NLQ9P2B4 639 aa3.9□□□□□ -1.79
RFC1-209ENST00000504974 ANKFY1Q9P2R3 1169 aa3.9□□□□□ -1.79
RFC1-209ENST00000504974 TESQ9UGI8 421 aaKnown RBP3.9□□□□□ -1.79
RFC1-209ENST00000504974 DMTF1Q9Y222 760 aa3.9□□□□□ -1.79
RFC1-209ENST00000504974 CCDC88BA6NC98 1476 aa3.9□□□□□ -1.79
RFC1-209ENST00000504974 IFT140Q96RY7 1462 aa3.9□□□□□ -1.79
RFC1-209ENST00000504974 CHD1O14646 1710 aa3.9□□□□□ -1.79
RFC1-209ENST00000504974 TRGV11A0A075B6L2 103 aa3.89□□□□□ -1.79
RFC1-209ENST00000504974 A0A087WWL8 130 aa3.89□□□□□ -1.79
RFC1-209ENST00000504974 PRAMEF33A0A0G2JMD5 474 aa3.89□□□□□ -1.79
RFC1-209ENST00000504974 MYADML2A6NDP7 307 aa3.89□□□□□ -1.79
RFC1-209ENST00000504974 RASA4BC9J798 803 aa3.89□□□□□ -1.79
RFC1-209ENST00000504974 RAB27BO00194 218 aa3.89□□□□□ -1.79
RFC1-209ENST00000504974 FOXN3O00409 490 aaPredicted RBP3.89□□□□□ -1.79
RFC1-209ENST00000504974 DCLK1O15075 740 aa3.89□□□□□ -1.79
RFC1-209ENST00000504974 RASA4O43374 803 aa3.89□□□□□ -1.79
RFC1-209ENST00000504974 PRAMEF10O60809 474 aa3.89□□□□□ -1.79
RFC1-209ENST00000504974 ZFPL1O95159 310 aa3.89□□□□□ -1.79
RFC1-209ENST00000504974 FDXRP22570 491 aa3.89□□□□□ -1.79
RFC1-209ENST00000504974 NR4A1P22736 598 aa3.89□□□□□ -1.79
RFC1-209ENST00000504974 NPTX2P47972 431 aa3.89□□□□□ -1.79
RFC1-209ENST00000504974 PXNP49023 591 aaPredicted RBP3.89□□□□□ -1.79
RFC1-209ENST00000504974 CARSP49589 748 aaKnown RBP3.89□□□□□ -1.79
RFC1-209ENST00000504974 NDUFV1P49821 464 aa3.89□□□□□ -1.79
RFC1-209ENST00000504974 ANXA11P50995 505 aaKnown RBP3.89□□□□□ -1.79
RFC1-209ENST00000504974 ALDH5A1P51649 535 aaPredicted RBP3.89□□□□□ -1.79
RFC1-209ENST00000504974 CASP5P51878 434 aa3.89□□□□□ -1.79
RFC1-209ENST00000504974 ZNF134P52741 427 aa3.89□□□□□ -1.79
RFC1-209ENST00000504974 RPS7P62081 194 aaKnown RBP3.89□□□□□ -1.79
RFC1-209ENST00000504974 GUCY1B3Q02153 619 aa3.89□□□□□ -1.79
RFC1-209ENST00000504974 TP53BP2Q13625 1128 aa3.89□□□□□ -1.79
RFC1-209ENST00000504974 TUBA3CQ13748 450 aa3.89□□□□□ -1.79
RFC1-209ENST00000504974 CYP2A13Q16696 494 aa3.89□□□□□ -1.79
RFC1-209ENST00000504974 PLA1AQ53H76 456 aa3.89□□□□□ -1.79
RFC1-209ENST00000504974 FAM209BQ5JX69 171 aa3.89□□□□□ -1.79
RFC1-209ENST00000504974 RRAGBQ5VZM2 374 aa3.89□□□□□ -1.79
RFC1-209ENST00000504974 XRRA1Q6P2D8 792 aa3.89□□□□□ -1.79
RFC1-209ENST00000504974 TUBA3EQ6PEY2 450 aa3.89□□□□□ -1.79
RFC1-209ENST00000504974 KCNV1Q6PIU1 500 aa3.89□□□□□ -1.79
RFC1-209ENST00000504974 USP51Q70EK9 711 aa3.89□□□□□ -1.79
RFC1-209ENST00000504974 UNC13DQ70J99 1090 aa3.89□□□□□ -1.79
RFC1-209ENST00000504974 COLGALT2Q8IYK4 626 aa3.89□□□□□ -1.79
RFC1-209ENST00000504974 ADGRG5Q8IZF4 528 aa3.89□□□□□ -1.79
RFC1-209ENST00000504974 LARP4BQ92615 738 aaKnown RBP3.89□□□□□ -1.79
RFC1-209ENST00000504974 PMM1Q92871 262 aa3.89□□□□□ -1.79
RFC1-209ENST00000504974 GJA10Q969M2 543 aa3.89□□□□□ -1.79
RFC1-209ENST00000504974 SPSB4Q96A44 273 aa3.89□□□□□ -1.79
RFC1-209ENST00000504974 NACC2Q96BF6 587 aa3.89□□□□□ -1.79
RFC1-209ENST00000504974 NMD3Q96D46 503 aaKnown RBP3.89□□□□□ -1.79
RFC1-209ENST00000504974 IQCDQ96DY2 449 aa3.89□□□□□ -1.79
RFC1-209ENST00000504974 SNX22Q96L94 193 aa3.89□□□□□ -1.79
RFC1-209ENST00000504974 BRIP1Q9BX63 1249 aa3.89□□□□□ -1.79
RFC1-209ENST00000504974 DPH1Q9BZG8 443 aa3.89□□□□□ -1.79
RFC1-209ENST00000504974 IKZF4Q9H2S9 585 aa3.89□□□□□ -1.79
RFC1-209ENST00000504974 CERS4Q9HA82 394 aa3.89□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms