RNA–Protein interactions for RNA: ENST00000504761.6

TCOF1-207, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TCOF1, Length 4,467 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-207ENST00000504761 PROSCO94903 275 aa14.78□□□□□ -0.04
TCOF1-207ENST00000504761 AADACL2Q6P093 401 aa14.78□□□□□ -0.04
TCOF1-207ENST00000504761 TAF2Q6P1X5 1199 aa14.78□□□□□ -0.04
TCOF1-207ENST00000504761 SCUBE3Q8IX30 993 aa14.78□□□□□ -0.04
TCOF1-207ENST00000504761 LNX1Q8TBB1 728 aaPredicted RBP14.78□□□□□ -0.04
TCOF1-207ENST00000504761 KRT35Q92764 455 aa14.78□□□□□ -0.04
TCOF1-207ENST00000504761 ATP6V1G3Q96LB4 118 aa14.78□□□□□ -0.04
TCOF1-207ENST00000504761 ZIM3Q96PE6 472 aa14.78□□□□□ -0.04
TCOF1-207ENST00000504761 G3BP2Q9UN86 482 aaKnown RBP14.78□□□□□ -0.04
TCOF1-207ENST00000504761 OPLAHO14841 1288 aa14.78□□□□□ -0.04
TCOF1-207ENST00000504761 XPAP23025 273 aaPredicted RBP14.78□□□□□ -0.04
TCOF1-207ENST00000504761 SPIRE1Q08AE8 756 aa14.78□□□□□ -0.04
TCOF1-207ENST00000504761 MAPK7Q13164 816 aa14.78□□□□□ -0.04
TCOF1-207ENST00000504761 MDH1BQ5I0G3 518 aa14.78□□□□□ -0.04
TCOF1-207ENST00000504761 LRRC15Q8TF66 581 aa14.78□□□□□ -0.04
TCOF1-207ENST00000504761 SLC13A1Q9BZW2 595 aa14.78□□□□□ -0.04
TCOF1-207ENST00000504761 CNOT10Q9H9A5 744 aaKnown RBP14.78□□□□□ -0.04
TCOF1-207ENST00000504761 A0A0G2JLL6 359 aaPredicted RBP14.77□□□□□ -0.04
TCOF1-207ENST00000504761 IQANK1A0A1B0GTG1 560 aa14.77□□□□□ -0.04
TCOF1-207ENST00000504761 PTENP60484 403 aa14.77□□□□□ -0.04
TCOF1-207ENST00000504761 EFHC1Q5JVL4 640 aa14.77□□□□□ -0.04
TCOF1-207ENST00000504761 DAB2IPQ5VWQ8 1189 aa14.77□□□□□ -0.04
TCOF1-207ENST00000504761 SPRYD7Q5W111 196 aa14.77□□□□□ -0.04
TCOF1-207ENST00000504761 IRF2BP2Q7Z5L9 587 aa14.77□□□□□ -0.04
TCOF1-207ENST00000504761 PRRT2Q7Z6L0 340 aaPredicted RBP14.77□□□□□ -0.04
TCOF1-207ENST00000504761 FAM172AQ8WUF8 416 aa14.77□□□□□ -0.04
TCOF1-207ENST00000504761 GCNAQ96QF7 691 aa14.77□□□□□ -0.04
TCOF1-207ENST00000504761 BFARQ9NZS9 450 aa14.77□□□□□ -0.04
TCOF1-207ENST00000504761 HPCAL4Q9UM19 191 aa14.77□□□□□ -0.04
TCOF1-207ENST00000504761 BARX2Q9UMQ3 279 aaPredicted RBP14.77□□□□□ -0.04
TCOF1-207ENST00000504761 PCDHB7Q9Y5E2 793 aa14.77□□□□□ -0.04
TCOF1-207ENST00000504761 COL16A1Q07092 1604 aaPredicted RBP14.77□□□□□ -0.04
TCOF1-207ENST00000504761 C4BP0C0L5 1744 aa14.77□□□□□ -0.04
TCOF1-207ENST00000504761 MYH13Q9UKX3 1938 aa14.77□□□□□ -0.04
TCOF1-207ENST00000504761 PDE2AO00408 941 aaPredicted RBP14.77□□□□□ -0.04
TCOF1-207ENST00000504761 PYGMP11217 842 aa14.77□□□□□ -0.04
TCOF1-207ENST00000504761 ZACNQ401N2 412 aa14.77□□□□□ -0.04
TCOF1-207ENST00000504761 TMEM139Q8IV31 216 aa14.77□□□□□ -0.04
TCOF1-207ENST00000504761 FBXO25Q8TCJ0 367 aa14.77□□□□□ -0.04
TCOF1-207ENST00000504761 BHMTQ93088 406 aa14.77□□□□□ -0.04
TCOF1-207ENST00000504761 C12orf42Q96LP6 360 aa14.77□□□□□ -0.04
TCOF1-207ENST00000504761 VPS11Q9H270 941 aa14.77□□□□□ -0.04
TCOF1-207ENST00000504761 RSAD1Q9HA92 442 aa14.77□□□□□ -0.04
TCOF1-207ENST00000504761 NRCAMQ92823 1304 aa14.77□□□□□ -0.05
TCOF1-207ENST00000504761 TLR2O60603 784 aa14.77□□□□□ -0.05
TCOF1-207ENST00000504761 ELNP15502 786 aa14.77□□□□□ -0.05
TCOF1-207ENST00000504761 PRLRP16471 622 aa14.77□□□□□ -0.05
TCOF1-207ENST00000504761 PMLP29590 882 aa14.77□□□□□ -0.05
TCOF1-207ENST00000504761 ACADSBP45954 432 aa14.77□□□□□ -0.05
TCOF1-207ENST00000504761 FAM110CQ1W6H9 321 aa14.77□□□□□ -0.05
TCOF1-207ENST00000504761 MTHFD1LQ6UB35 978 aa14.77□□□□□ -0.05
TCOF1-207ENST00000504761 MIB1Q86YT6 1006 aa14.77□□□□□ -0.05
TCOF1-207ENST00000504761 PABPC5Q96DU9 382 aaKnown RBP14.77□□□□□ -0.05
TCOF1-207ENST00000504761 MBOAT7Q96N66 472 aa14.77□□□□□ -0.05
TCOF1-207ENST00000504761 TRPC7Q9HCX4 862 aa14.77□□□□□ -0.05
TCOF1-207ENST00000504761 ALG13Q9NP73 1137 aaKnown RBP14.77□□□□□ -0.05
TCOF1-207ENST00000504761 XPNPEP1Q9NQW7 623 aa14.77□□□□□ -0.05
TCOF1-207ENST00000504761 CHMP2BQ9UQN3 213 aa14.77□□□□□ -0.05
TCOF1-207ENST00000504761 EEF2KO00418 725 aaKnown RBP14.76□□□□□ -0.05
TCOF1-207ENST00000504761 ARF4P18085 180 aaPredicted RBP14.76□□□□□ -0.05
TCOF1-207ENST00000504761 EPHB2P29323 1055 aa14.76□□□□□ -0.05
TCOF1-207ENST00000504761 TSTA3Q13630 321 aaPredicted RBP14.76□□□□□ -0.05
TCOF1-207ENST00000504761 SLC29A2Q14542 456 aa14.76□□□□□ -0.05
TCOF1-207ENST00000504761 PTGISQ16647 500 aa14.76□□□□□ -0.05
TCOF1-207ENST00000504761 ZCWPW2Q504Y3 356 aa14.76□□□□□ -0.05
TCOF1-207ENST00000504761 COBLL1Q53SF7 1204 aa14.76□□□□□ -0.05
TCOF1-207ENST00000504761 EPM2AIP1Q7L775 607 aaPredicted RBP14.76□□□□□ -0.05
TCOF1-207ENST00000504761 MYLK4Q86YV6 388 aaPredicted RBP14.76□□□□□ -0.05
TCOF1-207ENST00000504761 ATP11CQ8NB49 1132 aa14.76□□□□□ -0.05
TCOF1-207ENST00000504761 ARRDC4Q8NCT1 418 aa14.76□□□□□ -0.05
TCOF1-207ENST00000504761 STMN2Q93045 179 aa14.76□□□□□ -0.05
TCOF1-207ENST00000504761 ISCUQ9H1K1 167 aa14.76□□□□□ -0.05
TCOF1-207ENST00000504761 TJP2Q9UDY2 1190 aa14.76□□□□□ -0.05
TCOF1-207ENST00000504761 LAMB4A4D0S4 1761 aa14.76□□□□□ -0.05
TCOF1-207ENST00000504761 A0A087WUV0 522 aaPredicted RBP14.76□□□□□ -0.05
TCOF1-207ENST00000504761 ITIH2P19823 946 aa14.76□□□□□ -0.05
TCOF1-207ENST00000504761 RCN2Q14257 317 aa14.76□□□□□ -0.05
TCOF1-207ENST00000504761 BEND6Q5SZJ8 279 aaPredicted RBP14.76□□□□□ -0.05
TCOF1-207ENST00000504761 SP110Q9HB58 689 aa14.76□□□□□ -0.05
TCOF1-207ENST00000504761 DDX43Q9NXZ2 648 aaKnown RBP14.76□□□□□ -0.05
TCOF1-207ENST00000504761 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP14.76□□□□□ -0.05
TCOF1-207ENST00000504761 ITGA11Q9UKX5 1188 aa14.76□□□□□ -0.05
TCOF1-207ENST00000504761 ZFXP17010 805 aaPredicted RBP14.76□□□□□ -0.05
TCOF1-207ENST00000504761 PRKCIP41743 596 aa14.76□□□□□ -0.05
TCOF1-207ENST00000504761 INHBEP58166 350 aa14.76□□□□□ -0.05
TCOF1-207ENST00000504761 PPP2R2AP63151 447 aa14.76□□□□□ -0.05
TCOF1-207ENST00000504761 VEPH1Q14D04 833 aa14.76□□□□□ -0.05
TCOF1-207ENST00000504761 DUSP28Q4G0W2 176 aa14.76□□□□□ -0.05
TCOF1-207ENST00000504761 BOLA3Q53S33 107 aa14.76□□□□□ -0.05
TCOF1-207ENST00000504761 FAM133BQ5BKY9 247 aaKnown RBP14.76□□□□□ -0.05
TCOF1-207ENST00000504761 LLGL2Q6P1M3 1020 aa14.76□□□□□ -0.05
TCOF1-207ENST00000504761 NT5DC3Q86UY8 548 aa14.76□□□□□ -0.05
TCOF1-207ENST00000504761 ZNF410Q86VK4 478 aa14.76□□□□□ -0.05
TCOF1-207ENST00000504761 DAW1Q8N136 415 aa14.76□□□□□ -0.05
TCOF1-207ENST00000504761 TMEM106CQ9BVX2 250 aa14.76□□□□□ -0.05
TCOF1-207ENST00000504761 ANKZF1Q9H8Y5 726 aa14.76□□□□□ -0.05
TCOF1-207ENST00000504761 CYP3A43Q9HB55 503 aa14.76□□□□□ -0.05
TCOF1-207ENST00000504761 KRT82Q9NSB4 513 aa14.76□□□□□ -0.05
TCOF1-207ENST00000504761 TNFSF13BQ9Y275 285 aa14.76□□□□□ -0.05
TCOF1-207ENST00000504761 COPEO14579 308 aa14.76□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms