RNA–Protein interactions for RNA: ENST00000504430.5

NIPBL-204, Transcript of NIPBL, cohesin loading factor, humanhuman

TSL 2

Gene NIPBL, Length 3,455 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-204ENST00000504430 KHDC1LQ5JSQ8 128 aa5.64□□□□□ -1.51
NIPBL-204ENST00000504430 CPT1CQ8TCG5 803 aa5.64□□□□□ -1.51
NIPBL-204ENST00000504430 VPS50Q96JG6 964 aa5.64□□□□□ -1.51
NIPBL-204ENST00000504430 LBHD1Q9BQE6 289 aaPredicted RBP5.64□□□□□ -1.51
NIPBL-204ENST00000504430 TNMDQ9H2S6 317 aa5.64□□□□□ -1.51
NIPBL-204ENST00000504430 DNAJC18Q9H819 358 aa5.64□□□□□ -1.51
NIPBL-204ENST00000504430 ACTR3BQ9P1U1 418 aa5.64□□□□□ -1.51
NIPBL-204ENST00000504430 SF3B6Q9Y3B4 125 aaKnown RBP5.64□□□□□ -1.51
NIPBL-204ENST00000504430 USP15Q9Y4E8 981 aaPredicted RBP5.64□□□□□ -1.51
NIPBL-204ENST00000504430 CYP46A1Q9Y6A2 500 aa5.64□□□□□ -1.51
NIPBL-204ENST00000504430 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP5.64□□□□□ -1.519e-9■■□□□ 11.9
NIPBL-204ENST00000504430 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP5.63□□□□□ -1.51
NIPBL-204ENST00000504430 VILLO15195 856 aa5.63□□□□□ -1.51
NIPBL-204ENST00000504430 WISP1O95388 367 aa5.63□□□□□ -1.51
NIPBL-204ENST00000504430 HEXBP07686 556 aa5.63□□□□□ -1.51
NIPBL-204ENST00000504430 INHBAP08476 426 aa5.63□□□□□ -1.51
NIPBL-204ENST00000504430 KELP23276 732 aa5.63□□□□□ -1.51
NIPBL-204ENST00000504430 TPP2P29144 1249 aaPredicted RBP5.63□□□□□ -1.51
NIPBL-204ENST00000504430 GDI1P31150 447 aa5.63□□□□□ -1.51
NIPBL-204ENST00000504430 HOXA10P31260 410 aaPredicted RBP5.63□□□□□ -1.51
NIPBL-204ENST00000504430 PRAMEF9Q5VWM5 478 aa5.63□□□□□ -1.51
NIPBL-204ENST00000504430 TANGO2Q6ICL3 276 aa5.63□□□□□ -1.51
NIPBL-204ENST00000504430 THNSL1Q8IYQ7 743 aa5.63□□□□□ -1.51
NIPBL-204ENST00000504430 GLB1L3Q8NCI6 653 aaPredicted RBP5.63□□□□□ -1.51
NIPBL-204ENST00000504430 FAM163AQ96GL9 167 aaPredicted RBP5.63□□□□□ -1.51
NIPBL-204ENST00000504430 PKP4Q99569 1192 aa5.63□□□□□ -1.51
NIPBL-204ENST00000504430 KRTAP3-3Q9BYR6 98 aa5.63□□□□□ -1.51
NIPBL-204ENST00000504430 KRTAP3-2Q9BYR7 98 aa5.63□□□□□ -1.51
NIPBL-204ENST00000504430 FOXQ1Q9C009 403 aa5.63□□□□□ -1.51
NIPBL-204ENST00000504430 WTIPA6NIX2 430 aaPredicted RBP5.63□□□□□ -1.51
NIPBL-204ENST00000504430 FAM90A27PA6NNH2 459 aa5.63□□□□□ -1.51
NIPBL-204ENST00000504430 PRR33A8MZF0 331 aa5.63□□□□□ -1.51
NIPBL-204ENST00000504430 TAF4O00268 1085 aa5.63□□□□□ -1.51
NIPBL-204ENST00000504430 VWA5AO00534 786 aa5.63□□□□□ -1.51
NIPBL-204ENST00000504430 SYNCRIPO60506 623 aaKnown RBP5.63□□□□□ -1.51
NIPBL-204ENST00000504430 BCRP11274 1271 aa5.63□□□□□ -1.51
NIPBL-204ENST00000504430 TRA2BP62995 288 aaKnown RBP5.63□□□□□ -1.51
NIPBL-204ENST00000504430 PPARAQ07869 468 aa5.63□□□□□ -1.51
NIPBL-204ENST00000504430 BFSP1Q12934 665 aa5.63□□□□□ -1.51
NIPBL-204ENST00000504430 PRPF4BQ13523 1007 aaKnown RBP5.63□□□□□ -1.51
NIPBL-204ENST00000504430 ADRM1Q16186 407 aa5.63□□□□□ -1.51
NIPBL-204ENST00000504430 IMMTQ16891 758 aaKnown RBP5.63□□□□□ -1.51
NIPBL-204ENST00000504430 KHDC1Q4VXA5 237 aaKnown RBP5.63□□□□□ -1.51
NIPBL-204ENST00000504430 CWF19L1Q69YN2 538 aaKnown RBP5.63□□□□□ -1.51
NIPBL-204ENST00000504430 NFRKBQ6P4R8 1299 aa5.63□□□□□ -1.51
NIPBL-204ENST00000504430 PLEKHM3Q6ZWE6 761 aa5.63□□□□□ -1.51
NIPBL-204ENST00000504430 NACC2Q96BF6 587 aa5.63□□□□□ -1.51
NIPBL-204ENST00000504430 Q96M66 194 aa5.63□□□□□ -1.51
NIPBL-204ENST00000504430 C1orf43Q9BWL3 253 aa5.63□□□□□ -1.51
NIPBL-204ENST00000504430 PABPC3Q9H361 631 aaKnown RBP5.63□□□□□ -1.51
NIPBL-204ENST00000504430 SLAMF7Q9NQ25 335 aa5.63□□□□□ -1.51
NIPBL-204ENST00000504430 MARCH2Q9P0N8 246 aa5.63□□□□□ -1.51
NIPBL-204ENST00000504430 ZC3H7BQ9UGR2 993 aaKnown RBP5.63□□□□□ -1.51
NIPBL-204ENST00000504430 B3GALT1Q9Y5Z6 326 aa5.63□□□□□ -1.51
NIPBL-204ENST00000504430 H7BY64 318 aa5.62□□□□□ -1.51
NIPBL-204ENST00000504430 SLC25A17O43808 307 aa5.62□□□□□ -1.51
NIPBL-204ENST00000504430 TBC1D4O60343 1298 aa5.62□□□□□ -1.51
NIPBL-204ENST00000504430 ENTPD3O75355 529 aa5.62□□□□□ -1.51
NIPBL-204ENST00000504430 RGS9O75916 674 aaPredicted RBP5.62□□□□□ -1.51
NIPBL-204ENST00000504430 LRG1P02750 347 aa5.62□□□□□ -1.51
NIPBL-204ENST00000504430 CCNCP24863 283 aa5.62□□□□□ -1.51
NIPBL-204ENST00000504430 ICAM3P32942 547 aa5.62□□□□□ -1.51
NIPBL-204ENST00000504430 HSPA1LP34931 641 aa5.62□□□□□ -1.51
NIPBL-204ENST00000504430 IFNAR2P48551 515 aa5.62□□□□□ -1.51
NIPBL-204ENST00000504430 DLG4P78352 724 aa5.62□□□□□ -1.51
NIPBL-204ENST00000504430 FSTL1Q12841 308 aa5.62□□□□□ -1.51
NIPBL-204ENST00000504430 NMIQ13287 307 aaPredicted RBP5.62□□□□□ -1.51
NIPBL-204ENST00000504430 FGL2Q14314 439 aa5.62□□□□□ -1.51
NIPBL-204ENST00000504430 RABEP1Q15276 862 aa5.62□□□□□ -1.51
NIPBL-204ENST00000504430 CCDC57Q2TAC2 916 aa5.62□□□□□ -1.51
NIPBL-204ENST00000504430 CEP55Q53EZ4 464 aa5.62□□□□□ -1.51
NIPBL-204ENST00000504430 TAGAPQ8N103 731 aa5.62□□□□□ -1.51
NIPBL-204ENST00000504430 SLC16A10Q8TF71 515 aa5.62□□□□□ -1.51
NIPBL-204ENST00000504430 SIPA1Q96FS4 1042 aa5.62□□□□□ -1.51
NIPBL-204ENST00000504430 RIC8BQ9NVN3 520 aa5.62□□□□□ -1.51
NIPBL-204ENST00000504430 CHORDC1Q9UHD1 332 aaPredicted RBP5.62□□□□□ -1.51
NIPBL-204ENST00000504430 KCND3Q9UK17 655 aa5.62□□□□□ -1.51
NIPBL-204ENST00000504430 RIMKLBQ9ULI2 386 aa5.62□□□□□ -1.51
NIPBL-204ENST00000504430 TMEM5Q9Y2B1 443 aa5.62□□□□□ -1.51
NIPBL-204ENST00000504430 ASB3Q9Y575 518 aa5.62□□□□□ -1.51
NIPBL-204ENST00000504430 C7orf72A4D263 438 aa5.62□□□□□ -1.51
NIPBL-204ENST00000504430 SIGLEC6O43699 453 aa5.62□□□□□ -1.51
NIPBL-204ENST00000504430 SEC22BO75396 215 aa5.62□□□□□ -1.51
NIPBL-204ENST00000504430 PSMD10O75832 226 aa5.62□□□□□ -1.51
NIPBL-204ENST00000504430 PRPF6O94906 941 aaKnown RBP5.62□□□□□ -1.51
NIPBL-204ENST00000504430 TUBBP07437 444 aa5.62□□□□□ -1.51
NIPBL-204ENST00000504430 DNAJB1P25685 340 aa5.62□□□□□ -1.51
NIPBL-204ENST00000504430 KLRK1P26718 216 aa5.62□□□□□ -1.51
NIPBL-204ENST00000504430 PRKCIP41743 596 aa5.62□□□□□ -1.51
NIPBL-204ENST00000504430 RAD23AP54725 363 aa5.62□□□□□ -1.51
NIPBL-204ENST00000504430 NKX6-1P78426 367 aaPredicted RBP5.62□□□□□ -1.51
NIPBL-204ENST00000504430 CHAF1BQ13112 559 aa5.62□□□□□ -1.51
NIPBL-204ENST00000504430 NEUROD1Q13562 356 aa5.62□□□□□ -1.51
NIPBL-204ENST00000504430 DUSP28Q4G0W2 176 aa5.62□□□□□ -1.51
NIPBL-204ENST00000504430 ATG16L1Q676U5 607 aa5.62□□□□□ -1.51
NIPBL-204ENST00000504430 OTOAQ7RTW8 1153 aa5.62□□□□□ -1.51
NIPBL-204ENST00000504430 WDTC1Q8N5D0 677 aa5.62□□□□□ -1.51
NIPBL-204ENST00000504430 MNS1Q8NEH6 495 aa5.62□□□□□ -1.51
NIPBL-204ENST00000504430 AGR3Q8TD06 166 aa5.62□□□□□ -1.51
NIPBL-204ENST00000504430 SNX22Q96L94 193 aa5.62□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms