RNA–Protein interactions for RNA: ENST00000504289.1

COL1A1-210, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 2

Gene COL1A1, Length 481 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-210ENST00000504289 LEKR1Q6ZMV7 388 aa10.35□□□□□ -0.75
COL1A1-210ENST00000504289 DPH6Q7L8W6 267 aa10.35□□□□□ -0.75
COL1A1-210ENST00000504289 ARCQ7LC44 396 aa10.35□□□□□ -0.75
COL1A1-210ENST00000504289 RPAINQ86UA6 219 aa10.35□□□□□ -0.75
COL1A1-210ENST00000504289 SAPCD2Q86UD0 394 aa10.35□□□□□ -0.75
COL1A1-210ENST00000504289 HOOK3Q86VS8 718 aa10.35□□□□□ -0.75
COL1A1-210ENST00000504289 DDX42Q86XP3 938 aaKnown RBP eCLIP10.35□□□□□ -0.75
COL1A1-210ENST00000504289 RELL1Q8IUW5 271 aa10.35□□□□□ -0.75
COL1A1-210ENST00000504289 SNF8Q96H20 258 aa10.35□□□□□ -0.75
COL1A1-210ENST00000504289 ZNF560Q96MR9 790 aa10.35□□□□□ -0.75
COL1A1-210ENST00000504289 HINFPQ9BQA5 517 aa10.35□□□□□ -0.75
COL1A1-210ENST00000504289 TRIM51Q9BSJ1 452 aa10.35□□□□□ -0.75
COL1A1-210ENST00000504289 TRIM7Q9C029 511 aa10.35□□□□□ -0.75
COL1A1-210ENST00000504289 ELOVL4Q9GZR5 314 aa10.35□□□□□ -0.75
COL1A1-210ENST00000504289 STMN4Q9H169 189 aaPredicted RBP10.35□□□□□ -0.75
COL1A1-210ENST00000504289 DPH5Q9H2P9 285 aa10.35□□□□□ -0.75
COL1A1-210ENST00000504289 TMBIM4Q9HC24 238 aa10.35□□□□□ -0.75
COL1A1-210ENST00000504289 ASNSD1Q9NWL6 643 aa10.35□□□□□ -0.75
COL1A1-210ENST00000504289 GDAP2Q9NXN4 497 aa10.35□□□□□ -0.75
COL1A1-210ENST00000504289 POLIQ9UNA4 740 aa10.35□□□□□ -0.75
COL1A1-210ENST00000504289 SMAPO00193 183 aa10.34□□□□□ -0.75
COL1A1-210ENST00000504289 ADCY6O43306 1168 aa10.34□□□□□ -0.75
COL1A1-210ENST00000504289 MICAL2O94851 1124 aa10.34□□□□□ -0.75
COL1A1-210ENST00000504289 NPTXRO95502 500 aa10.34□□□□□ -0.75
COL1A1-210ENST00000504289 ALDH1A1P00352 501 aa10.34□□□□□ -0.75
COL1A1-210ENST00000504289 CALCAP01258 141 aa10.34□□□□□ -0.75
COL1A1-210ENST00000504289 ERBB2P04626 1255 aa10.34□□□□□ -0.75
COL1A1-210ENST00000504289 RALAP11233 206 aa10.34□□□□□ -0.75
COL1A1-210ENST00000504289 CAPN2P17655 700 aa10.34□□□□□ -0.75
COL1A1-210ENST00000504289 RDXP35241 583 aaKnown RBP10.34□□□□□ -0.75
COL1A1-210ENST00000504289 ACTN2P35609 894 aa10.34□□□□□ -0.75
COL1A1-210ENST00000504289 RPL21P46778 160 aaKnown RBP10.34□□□□□ -0.75
COL1A1-210ENST00000504289 TM4SF4P48230 202 aa10.34□□□□□ -0.75
COL1A1-210ENST00000504289 LMAN1P49257 510 aa10.34□□□□□ -0.75
COL1A1-210ENST00000504289 CDR1P51861 262 aa10.34□□□□□ -0.75
COL1A1-210ENST00000504289 PMS2P54278 862 aa10.34□□□□□ -0.75
COL1A1-210ENST00000504289 PLTPP55058 493 aa10.34□□□□□ -0.75
COL1A1-210ENST00000504289 GJA9P57773 515 aa10.34□□□□□ -0.75
COL1A1-210ENST00000504289 TAS2R40P59535 323 aa10.34□□□□□ -0.75
COL1A1-210ENST00000504289 PSMC1P62191 440 aaKnown RBP10.34□□□□□ -0.75
COL1A1-210ENST00000504289 RPL7AP62424 266 aaKnown RBP10.34□□□□□ -0.75
COL1A1-210ENST00000504289 SNX17Q15036 470 aa10.34□□□□□ -0.75
COL1A1-210ENST00000504289 UAP1Q16222 522 aaPredicted RBP10.34□□□□□ -0.75
COL1A1-210ENST00000504289 FSCN1Q16658 493 aaKnown RBP10.34□□□□□ -0.75
COL1A1-210ENST00000504289 PTPN20Q4JDL3 420 aa10.34□□□□□ -0.75
COL1A1-210ENST00000504289 ZNF394Q53GI3 561 aa10.34□□□□□ -0.75
COL1A1-210ENST00000504289 ARHGAP17Q68EM7 881 aa10.34□□□□□ -0.75
COL1A1-210ENST00000504289 AADACL2Q6P093 401 aa10.34□□□□□ -0.75
COL1A1-210ENST00000504289 LIMS2Q7Z4I7 341 aa10.34□□□□□ -0.75
COL1A1-210ENST00000504289 ADAT2Q7Z6V5 191 aaKnown RBP10.34□□□□□ -0.75
COL1A1-210ENST00000504289 RSPH3Q86UC2 560 aa10.34□□□□□ -0.75
COL1A1-210ENST00000504289 CDR2LQ86X02 465 aaPredicted RBP10.34□□□□□ -0.75
COL1A1-210ENST00000504289 XYLT1Q86Y38 959 aa10.34□□□□□ -0.75
COL1A1-210ENST00000504289 CCDC50Q8IVM0 306 aa10.34□□□□□ -0.75
COL1A1-210ENST00000504289 NKD2Q969F2 451 aaPredicted RBP10.34□□□□□ -0.75
COL1A1-210ENST00000504289 ZBTB10Q96DT7 871 aa10.34□□□□□ -0.75
COL1A1-210ENST00000504289 PGM2Q96G03 612 aa10.34□□□□□ -0.75
COL1A1-210ENST00000504289 ZNF668Q96K58 619 aaPredicted RBP10.34□□□□□ -0.75
COL1A1-210ENST00000504289 HEXIM2Q96MH2 286 aaKnown RBP10.34□□□□□ -0.75
COL1A1-210ENST00000504289 MCEEQ96PE7 176 aa10.34□□□□□ -0.75
COL1A1-210ENST00000504289 SLITRK1Q96PX8 696 aa10.34□□□□□ -0.75
COL1A1-210ENST00000504289 CNPY3Q9BT09 278 aa10.34□□□□□ -0.75
COL1A1-210ENST00000504289 TRAIPQ9BWF2 469 aa10.34□□□□□ -0.75
COL1A1-210ENST00000504289 ROPN1BQ9BZX4 212 aaPredicted RBP10.34□□□□□ -0.75
COL1A1-210ENST00000504289 TRIM6Q9C030 488 aaPredicted RBP10.34□□□□□ -0.75
COL1A1-210ENST00000504289 PHACTR1Q9C0D0 580 aa10.34□□□□□ -0.75
COL1A1-210ENST00000504289 SDCBP2Q9H190 292 aa10.34□□□□□ -0.75
COL1A1-210ENST00000504289 UPF3AQ9H1J1 476 aaKnown RBP10.34□□□□□ -0.75
COL1A1-210ENST00000504289 NEUROG2Q9H2A3 272 aa10.34□□□□□ -0.75
COL1A1-210ENST00000504289 SMYD3Q9H7B4 428 aa10.34□□□□□ -0.75
COL1A1-210ENST00000504289 SYNCQ9H7C4 482 aa10.34□□□□□ -0.75
COL1A1-210ENST00000504289 ROPN1Q9HAT0 212 aaPredicted RBP10.34□□□□□ -0.75
COL1A1-210ENST00000504289 PRDM10Q9NQV6 1147 aa10.34□□□□□ -0.75
COL1A1-210ENST00000504289 CHST12Q9NRB3 414 aa10.34□□□□□ -0.75
COL1A1-210ENST00000504289 CWC15Q9P013 229 aaKnown RBP10.34□□□□□ -0.75
COL1A1-210ENST00000504289 SNX24Q9Y343 169 aa10.34□□□□□ -0.75
COL1A1-210ENST00000504289 TCRBV7S2A1N4TA0A589 114 aa10.33□□□□□ -0.76
COL1A1-210ENST00000504289 ZNF487B1APH4 448 aa10.33□□□□□ -0.76
COL1A1-210ENST00000504289 PIRO00625 290 aa10.33□□□□□ -0.76
COL1A1-210ENST00000504289 DPYSL4O14531 572 aa10.33□□□□□ -0.76
COL1A1-210ENST00000504289 TNPO2O14787 897 aaKnown RBP10.33□□□□□ -0.76
COL1A1-210ENST00000504289 CA12O43570 354 aa10.33□□□□□ -0.76
COL1A1-210ENST00000504289 RNF8O76064 485 aa10.33□□□□□ -0.76
COL1A1-210ENST00000504289 PSMA2P25787 234 aa10.33□□□□□ -0.76
COL1A1-210ENST00000504289 RFC1P35251 1148 aaPredicted RBP10.33□□□□□ -0.76
COL1A1-210ENST00000504289 ZNF143P52747 638 aaPredicted RBP10.33□□□□□ -0.76
COL1A1-210ENST00000504289 NDST1P52848 882 aa10.33□□□□□ -0.76
COL1A1-210ENST00000504289 PURAQ00577 322 aaKnown RBP10.33□□□□□ -0.76
COL1A1-210ENST00000504289 KRT17Q04695 432 aa10.33□□□□□ -0.76
COL1A1-210ENST00000504289 ZNF844Q08AG5 666 aa10.33□□□□□ -0.76
COL1A1-210ENST00000504289 ZNF252P-AS1Q0IIN9 211 aa10.33□□□□□ -0.76
COL1A1-210ENST00000504289 PDCLQ13371 301 aa10.33□□□□□ -0.76
COL1A1-210ENST00000504289 BYSLQ13895 437 aaKnown RBP10.33□□□□□ -0.76
COL1A1-210ENST00000504289 TTMPQ5BVD1 217 aa10.33□□□□□ -0.76
COL1A1-210ENST00000504289 CEP85LQ5SZL2 805 aa10.33□□□□□ -0.76
COL1A1-210ENST00000504289 C6orf118Q5T5N4 469 aa10.33□□□□□ -0.76
COL1A1-210ENST00000504289 MFSD14CQ5VZR4 134 aa10.33□□□□□ -0.76
COL1A1-210ENST00000504289 DENND2CQ68D51 928 aa10.33□□□□□ -0.76
COL1A1-210ENST00000504289 SPOCD1Q6ZMY3 1216 aa10.33□□□□□ -0.76
COL1A1-210ENST00000504289 FAM43BQ6ZT52 329 aaPredicted RBP10.33□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms