RNA–Protein interactions for RNA: ENST00000504078.1

USP46-205, Transcript of ubiquitin specific peptidase 46, humanhuman

TSL 4

Gene USP46, Length 573 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP46-205ENST00000504078 BTLAQ7Z6A9 289 aa4.01□□□□□ -1.77
USP46-205ENST00000504078 PDZD3Q86UT5 571 aa4.01□□□□□ -1.77
USP46-205ENST00000504078 FERMT3Q86UX7 667 aa4.01□□□□□ -1.77
USP46-205ENST00000504078 WDR5BQ86VZ2 330 aa4.01□□□□□ -1.77
USP46-205ENST00000504078 TTC30AQ86WT1 665 aa4.01□□□□□ -1.77
USP46-205ENST00000504078 NOSTRINQ8IVI9 506 aa4.01□□□□□ -1.77
USP46-205ENST00000504078 YAF2Q8IY57 180 aa4.01□□□□□ -1.77
USP46-205ENST00000504078 TTC9BQ8N6N2 239 aa4.01□□□□□ -1.77
USP46-205ENST00000504078 OR2I1PQ8NGU4 316 aa4.01□□□□□ -1.77
USP46-205ENST00000504078 TPCN2Q8NHX9 752 aa4.01□□□□□ -1.77
USP46-205ENST00000504078 CSGALNACT1Q8TDX6 532 aa4.01□□□□□ -1.77
USP46-205ENST00000504078 TBCKQ8TEA7 893 aa4.01□□□□□ -1.77
USP46-205ENST00000504078 HDAC7Q8WUI4 952 aa4.01□□□□□ -1.77
USP46-205ENST00000504078 GAB3Q8WWW8 586 aa4.01□□□□□ -1.77
USP46-205ENST00000504078 RUFY2Q8WXA3 655 aa4.01□□□□□ -1.77
USP46-205ENST00000504078 SLC7A3Q8WY07 619 aa4.01□□□□□ -1.77
USP46-205ENST00000504078 DDX1Q92499 740 aaKnown RBP4.01□□□□□ -1.77
USP46-205ENST00000504078 ELSPBP1Q96BH3 223 aa4.01□□□□□ -1.77
USP46-205ENST00000504078 ERLEC1Q96DZ1 483 aa4.01□□□□□ -1.77
USP46-205ENST00000504078 DYDC2Q96IM9 177 aa4.01□□□□□ -1.77
USP46-205ENST00000504078 AIFM3Q96NN9 605 aa4.01□□□□□ -1.77
USP46-205ENST00000504078 PGLYRP2Q96PD5 576 aa4.01□□□□□ -1.77
USP46-205ENST00000504078 LXNQ9BS40 222 aa4.01□□□□□ -1.77
USP46-205ENST00000504078 MKNK1Q9BUB5 465 aa4.01□□□□□ -1.77
USP46-205ENST00000504078 LSM14BQ9BX40 385 aaKnown RBP4.01□□□□□ -1.77
USP46-205ENST00000504078 SLC26A6Q9BXS9 759 aa4.01□□□□□ -1.77
USP46-205ENST00000504078 FAM126AQ9BYI3 521 aaPredicted RBP4.01□□□□□ -1.77
USP46-205ENST00000504078 RHOBTB2Q9BYZ6 727 aa4.01□□□□□ -1.77
USP46-205ENST00000504078 LSG1Q9H089 658 aaKnown RBP4.01□□□□□ -1.77
USP46-205ENST00000504078 CSRNP2Q9H175 543 aa4.01□□□□□ -1.77
USP46-205ENST00000504078 POLR3FQ9H1D9 316 aaPredicted RBP4.01□□□□□ -1.77
USP46-205ENST00000504078 SLKQ9H2G2 1235 aaPredicted RBP4.01□□□□□ -1.77
USP46-205ENST00000504078 CYP4F11Q9HBI6 524 aa4.01□□□□□ -1.77
USP46-205ENST00000504078 ZFP14Q9HCL3 533 aa4.01□□□□□ -1.77
USP46-205ENST00000504078 C6orf50Q9HD87 102 aa4.01□□□□□ -1.77
USP46-205ENST00000504078 RBM28Q9NW13 759 aaKnown RBP4.01□□□□□ -1.77
USP46-205ENST00000504078 GTSE1Q9NYZ3 720 aa4.01□□□□□ -1.77
USP46-205ENST00000504078 RGL1Q9NZL6 768 aa4.01□□□□□ -1.77
USP46-205ENST00000504078 KANSL3Q9P2N6 904 aa4.01□□□□□ -1.77
USP46-205ENST00000504078 MTRRQ9UBK8 725 aa4.01□□□□□ -1.77
USP46-205ENST00000504078 VAV3Q9UKW4 847 aa4.01□□□□□ -1.77
USP46-205ENST00000504078 INSL5Q9Y5Q6 135 aa4.01□□□□□ -1.77
USP46-205ENST00000504078 ZFP37Q9Y6Q3 630 aaPredicted RBP4.01□□□□□ -1.77
USP46-205ENST00000504078 CHD6Q8TD26 2715 aa4.01□□□□□ -1.77
USP46-205ENST00000504078 ZZEF1O43149 2961 aa4.01□□□□□ -1.77
USP46-205ENST00000504078 TSC2P49815 1807 aa4□□□□□ -1.77
USP46-205ENST00000504078 CARNS1A5YM72 827 aa4□□□□□ -1.77
USP46-205ENST00000504078 F8W735 103 aaPredicted RBP4□□□□□ -1.77
USP46-205ENST00000504078 TAF4O00268 1085 aa4□□□□□ -1.77
USP46-205ENST00000504078 ARNTLO00327 626 aa4□□□□□ -1.77
USP46-205ENST00000504078 MAN2B1O00754 1011 aa4□□□□□ -1.77
USP46-205ENST00000504078 B3GAT3O94766 335 aa4□□□□□ -1.77
USP46-205ENST00000504078 PAPLNO95428 1278 aa4□□□□□ -1.77
USP46-205ENST00000504078 EGFP01133 1207 aa4□□□□□ -1.77
USP46-205ENST00000504078 ZNF806P0C7X5 589 aa4□□□□□ -1.77
USP46-205ENST00000504078 CPB1P15086 417 aa4□□□□□ -1.77
USP46-205ENST00000504078 PSMC3P17980 439 aa4□□□□□ -1.77
USP46-205ENST00000504078 GLRA2P23416 452 aa4□□□□□ -1.77
USP46-205ENST00000504078 YWHABP31946 246 aaKnown RBP4□□□□□ -1.77
USP46-205ENST00000504078 CIITAP33076 1130 aa4□□□□□ -1.77
USP46-205ENST00000504078 LIFRP42702 1097 aa4□□□□□ -1.77
USP46-205ENST00000504078 CLCNKBP51801 687 aa4□□□□□ -1.77
USP46-205ENST00000504078 OSTNP61366 133 aa4□□□□□ -1.77
USP46-205ENST00000504078 PSMC5P62195 406 aa4□□□□□ -1.77
USP46-205ENST00000504078 IRX6P78412 446 aaPredicted RBP4□□□□□ -1.77
USP46-205ENST00000504078 SOX4Q06945 474 aaPredicted RBP4□□□□□ -1.77
USP46-205ENST00000504078 RAB33AQ14088 237 aa4□□□□□ -1.77
USP46-205ENST00000504078 INF2Q27J81 1249 aa4□□□□□ -1.77
USP46-205ENST00000504078 PLK5Q496M5 336 aa4□□□□□ -1.77
USP46-205ENST00000504078 TRIM68Q6AZZ1 485 aa4□□□□□ -1.77
USP46-205ENST00000504078 PDZRN4Q6ZMN7 1036 aaPredicted RBP4□□□□□ -1.77
USP46-205ENST00000504078 Q6ZS46 218 aa4□□□□□ -1.77
USP46-205ENST00000504078 SRGAP1Q7Z6B7 1085 aa4□□□□□ -1.77
USP46-205ENST00000504078 SGMS1Q86VZ5 419 aa4□□□□□ -1.77
USP46-205ENST00000504078 MARCH9Q86YJ5 346 aa4□□□□□ -1.77
USP46-205ENST00000504078 MAP4K3Q8IVH8 894 aa4□□□□□ -1.77
USP46-205ENST00000504078 HACE1Q8IYU2 909 aa4□□□□□ -1.77
USP46-205ENST00000504078 SPEM1Q8N4L4 309 aa4□□□□□ -1.77
USP46-205ENST00000504078 CEP120Q8N960 986 aa4□□□□□ -1.77
USP46-205ENST00000504078 RIN3Q8TB24 985 aa4□□□□□ -1.77
USP46-205ENST00000504078 SHKBP1Q8TBC3 707 aa4□□□□□ -1.77
USP46-205ENST00000504078 ETNPPLQ8TBG4 499 aa4□□□□□ -1.77
USP46-205ENST00000504078 MDM1Q8TC05 714 aa4□□□□□ -1.77
USP46-205ENST00000504078 SMARCD2Q92925 531 aa4□□□□□ -1.77
USP46-205ENST00000504078 CCDC43Q96MW1 224 aaKnown RBP4□□□□□ -1.77
USP46-205ENST00000504078 LRRC3BQ96PB8 259 aa4□□□□□ -1.77
USP46-205ENST00000504078 POLR3CQ9BUI4 534 aaPredicted RBP4□□□□□ -1.77
USP46-205ENST00000504078 ZMYND12Q9H0C1 365 aa4□□□□□ -1.77
USP46-205ENST00000504078 TSPAN10Q9H1Z9 355 aaPredicted RBP4□□□□□ -1.77
USP46-205ENST00000504078 PDZD7Q9H5P4 517 aa4□□□□□ -1.77
USP46-205ENST00000504078 DHX33Q9H6R0 707 aaKnown RBP4□□□□□ -1.77
USP46-205ENST00000504078 POLD4Q9HCU8 107 aa4□□□□□ -1.77
USP46-205ENST00000504078 CEP72Q9P209 647 aa4□□□□□ -1.77
USP46-205ENST00000504078 STK39Q9UEW8 545 aa4□□□□□ -1.77
USP46-205ENST00000504078 DDX25Q9UHL0 483 aaKnown RBP4□□□□□ -1.77
USP46-205ENST00000504078 KCNH3Q9ULD8 1083 aa4□□□□□ -1.77
USP46-205ENST00000504078 WASF3Q9UPY6 502 aa4□□□□□ -1.77
USP46-205ENST00000504078 GIT1Q9Y2X7 761 aa4□□□□□ -1.77
USP46-205ENST00000504078 YIPF1Q9Y548 306 aa4□□□□□ -1.77
USP46-205ENST00000504078 NUP210Q8TEM1 1887 aaPredicted RBP4□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms