RNA–Protein interactions for RNA: ENST00000503492.5

PCDH1-204, Transcript of protocadherin 1, humanhuman

TSL 5 BASIC

Gene PCDH1, Length 2,373 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH1-204ENST00000503492 FAM49AQ9H0Q0 323 aaPredicted RBP23.74■■□□□ 1.39
PCDH1-204ENST00000503492 CPA4Q9UI42 421 aa23.74■■□□□ 1.39
PCDH1-204ENST00000503492 WDR3Q9UNX4 943 aaKnown RBP eCLIP23.74■■□□□ 1.39
PCDH1-204ENST00000503492 GINS2Q9Y248 185 aa23.74■■□□□ 1.39
PCDH1-204ENST00000503492 RRN3P2A6NIE6 340 aa23.74■■□□□ 1.39
PCDH1-204ENST00000503492 ATF2P15336 505 aa23.74■■□□□ 1.39
PCDH1-204ENST00000503492 ATF7P17544 494 aaPredicted RBP23.74■■□□□ 1.39
PCDH1-204ENST00000503492 CHKAP35790 457 aa23.74■■□□□ 1.39
PCDH1-204ENST00000503492 VPS41P49754 854 aa23.74■■□□□ 1.39
PCDH1-204ENST00000503492 ITGA8P53708 1063 aa23.74■■□□□ 1.39
PCDH1-204ENST00000503492 RBP5P82980 135 aa23.74■■□□□ 1.39
PCDH1-204ENST00000503492 XYLT1Q86Y38 959 aa23.74■■□□□ 1.39
PCDH1-204ENST00000503492 UHMK1Q8TAS1 419 aaKnown RBP23.74■■□□□ 1.39
PCDH1-204ENST00000503492 TLCD1Q96CP7 247 aa23.74■■□□□ 1.39
PCDH1-204ENST00000503492 KIF12Q96FN5 646 aa23.74■■□□□ 1.39
PCDH1-204ENST00000503492 SLC12A6Q9UHW9 1150 aa23.74■■□□□ 1.39
PCDH1-204ENST00000503492 NPTXRO95502 500 aa23.73■■□□□ 1.39
PCDH1-204ENST00000503492 PSMA2P25787 234 aa23.73■■□□□ 1.39
PCDH1-204ENST00000503492 HOXA11P31270 313 aaPredicted RBP23.73■■□□□ 1.39
PCDH1-204ENST00000503492 ARFGAP1Q8N6T3 406 aa23.73■■□□□ 1.39
PCDH1-204ENST00000503492 CDHR5Q9HBB8 845 aa23.73■■□□□ 1.39
PCDH1-204ENST00000503492 RSPH14Q9UHP6 348 aa23.73■■□□□ 1.39
PCDH1-204ENST00000503492 ADCY8P40145 1251 aa23.73■■□□□ 1.39
PCDH1-204ENST00000503492 GSCP56915 257 aaPredicted RBP23.73■■□□□ 1.39
PCDH1-204ENST00000503492 ODF2Q5BJF6 829 aa23.73■■□□□ 1.39
PCDH1-204ENST00000503492 NT5DC4Q86YG4 428 aa23.73■■□□□ 1.39
PCDH1-204ENST00000503492 PKNOX2Q96KN3 472 aa23.73■■□□□ 1.39
PCDH1-204ENST00000503492 HEXIM2Q96MH2 286 aaKnown RBP23.73■■□□□ 1.39
PCDH1-204ENST00000503492 BARX2Q9UMQ3 279 aaPredicted RBP23.73■■□□□ 1.39
PCDH1-204ENST00000503492 hCG_1818297A0A087WSY0 165 aa23.72■■□□□ 1.39
PCDH1-204ENST00000503492 A6NJR5 290 aa23.72■■□□□ 1.39
PCDH1-204ENST00000503492 LIASO43766 372 aa23.72■■□□□ 1.39
PCDH1-204ENST00000503492 GPR32O75388 356 aa23.72■■□□□ 1.39
PCDH1-204ENST00000503492 STAU1O95793 577 aaKnown RBP23.72■■□□□ 1.39
PCDH1-204ENST00000503492 VDRP11473 427 aa23.72■■□□□ 1.39
PCDH1-204ENST00000503492 NDST1P52848 882 aa23.72■■□□□ 1.39
PCDH1-204ENST00000503492 COPS2P61201 443 aa23.72■■□□□ 1.39
PCDH1-204ENST00000503492 PPP2R2AP63151 447 aa23.72■■□□□ 1.39
PCDH1-204ENST00000503492 PPARDQ03181 441 aa23.72■■□□□ 1.39
PCDH1-204ENST00000503492 INCA1Q0VD86 236 aa23.72■■□□□ 1.39
PCDH1-204ENST00000503492 CNGA2Q16280 664 aa23.72■■□□□ 1.39
PCDH1-204ENST00000503492 PRUNE1Q86TP1 453 aa23.72■■□□□ 1.39
PCDH1-204ENST00000503492 CDC42EP4Q9H3Q1 356 aaKnown RBP23.72■■□□□ 1.39
PCDH1-204ENST00000503492 METTL5Q9NRN9 209 aaKnown RBP23.72■■□□□ 1.39
PCDH1-204ENST00000503492 DDX56Q9NY93 547 aaKnown RBP23.72■■□□□ 1.39
PCDH1-204ENST00000503492 TRIP11Q15643 1979 aa23.72■■□□□ 1.39
PCDH1-204ENST00000503492 DOCK3Q8IZD9 2030 aa23.72■■□□□ 1.39
PCDH1-204ENST00000503492 M0QYV0 167 aa23.72■■□□□ 1.39
PCDH1-204ENST00000503492 TJP3O95049 919 aa23.72■■□□□ 1.39
PCDH1-204ENST00000503492 SMIM10L2AP0DMW4 78 aa23.72■■□□□ 1.39
PCDH1-204ENST00000503492 SMIM10L2BP0DMW5 78 aa23.72■■□□□ 1.39
PCDH1-204ENST00000503492 GPD2P43304 727 aa23.72■■□□□ 1.39
PCDH1-204ENST00000503492 IRX5P78411 483 aaPredicted RBP23.72■■□□□ 1.39
PCDH1-204ENST00000503492 ZNF365Q70YC5 407 aa23.72■■□□□ 1.39
PCDH1-204ENST00000503492 EMC1Q8N766 993 aa23.72■■□□□ 1.39
PCDH1-204ENST00000503492 KAT2BQ92831 832 aa23.72■■□□□ 1.39
PCDH1-204ENST00000503492 SYNCQ9H7C4 482 aa23.72■■□□□ 1.39
PCDH1-204ENST00000503492 WDR35Q9P2L0 1181 aa23.72■■□□□ 1.39
PCDH1-204ENST00000503492 DNPEPQ9ULA0 475 aa23.72■■□□□ 1.39
PCDH1-204ENST00000503492 GNEQ9Y223 722 aaKnown RBP23.72■■□□□ 1.39
PCDH1-204ENST00000503492 ZNF236Q9UL36 1845 aa23.71■■□□□ 1.39
PCDH1-204ENST00000503492 LRRD1A4D1F6 860 aa23.71■■□□□ 1.39
PCDH1-204ENST00000503492 LRCH4O75427 683 aa23.71■■□□□ 1.39
PCDH1-204ENST00000503492 KLRC2P26717 231 aa23.71■■□□□ 1.39
PCDH1-204ENST00000503492 PTPN7P35236 360 aa23.71■■□□□ 1.39
PCDH1-204ENST00000503492 CDKN2BP42772 138 aa23.71■■□□□ 1.39
PCDH1-204ENST00000503492 SLC25A11Q02978 314 aaKnown RBP23.71■■□□□ 1.39
PCDH1-204ENST00000503492 ZNF268Q14587 947 aaPredicted RBP23.71■■□□□ 1.39
PCDH1-204ENST00000503492 DCAF4L1Q3SXM0 396 aa23.71■■□□□ 1.39
PCDH1-204ENST00000503492 TRMT10CQ7L0Y3 403 aaKnown RBP23.71■■□□□ 1.39
PCDH1-204ENST00000503492 FNIP1Q8TF40 1166 aa23.71■■□□□ 1.39
PCDH1-204ENST00000503492 DDX23Q9BUQ8 820 aaKnown RBP23.71■■□□□ 1.39
PCDH1-204ENST00000503492 TRAIPQ9BWF2 469 aa23.71■■□□□ 1.39
PCDH1-204ENST00000503492 SNTG2Q9NY99 539 aa23.71■■□□□ 1.39
PCDH1-204ENST00000503492 ANAPC5Q9UJX4 755 aa23.71■■□□□ 1.39
PCDH1-204ENST00000503492 TLDC2A0PJX2 215 aa23.71■■□□□ 1.39
PCDH1-204ENST00000503492 HMGCRP04035 888 aa23.71■■□□□ 1.39
PCDH1-204ENST00000503492 CYP3A5P20815 502 aa23.71■■□□□ 1.39
PCDH1-204ENST00000503492 GABRB2P47870 512 aa23.71■■□□□ 1.39
PCDH1-204ENST00000503492 TFDP3Q5H9I0 405 aa23.71■■□□□ 1.39
PCDH1-204ENST00000503492 MORN1Q5T089 497 aa23.71■■□□□ 1.39
PCDH1-204ENST00000503492 POLNQ7Z5Q5 900 aa23.71■■□□□ 1.39
PCDH1-204ENST00000503492 CCDC89Q8N998 374 aa23.71■■□□□ 1.39
PCDH1-204ENST00000503492 UBA3Q8TBC4 463 aa23.71■■□□□ 1.39
PCDH1-204ENST00000503492 LENG1Q96BZ8 264 aaPredicted RBP23.71■■□□□ 1.39
PCDH1-204ENST00000503492 PGM2Q96G03 612 aa23.71■■□□□ 1.39
PCDH1-204ENST00000503492 EIF2AQ9BY44 585 aaKnown RBP23.71■■□□□ 1.39
PCDH1-204ENST00000503492 GCOM2Q9BZD3 368 aaPredicted RBP23.71■■□□□ 1.39
PCDH1-204ENST00000503492 SLC5A4Q9NY91 659 aa23.71■■□□□ 1.39
PCDH1-204ENST00000503492 FLRT1Q9NZU1 646 aa23.71■■□□□ 1.39
PCDH1-204ENST00000503492 F2P00734 622 aa23.7■■□□□ 1.38
PCDH1-204ENST00000503492 IL1R2P27930 398 aa23.7■■□□□ 1.38
PCDH1-204ENST00000503492 CAV1Q03135 178 aa23.7■■□□□ 1.38
PCDH1-204ENST00000503492 PTGISQ16647 500 aa23.7■■□□□ 1.38
PCDH1-204ENST00000503492 DPH6Q7L8W6 267 aa23.7■■□□□ 1.38
PCDH1-204ENST00000503492 CATSPER4Q7RTX7 472 aa23.7■■□□□ 1.38
PCDH1-204ENST00000503492 ZMAT2Q96NC0 199 aaKnown RBP23.7■■□□□ 1.38
PCDH1-204ENST00000503492 TMEM109Q9BVC6 243 aa23.7■■□□□ 1.38
PCDH1-204ENST00000503492 C3orf70A6NLC5 250 aaPredicted RBP23.7■■□□□ 1.38
PCDH1-204ENST00000503492 SMIM23A6NLE4 172 aa23.7■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 110.8 ms