RNA–Protein interactions for RNA: ENST00000503338.5

TOPBP1-202, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 3

Gene TOPBP1, Length 618 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-202ENST00000503338 ACADSBP45954 432 aa8.61□□□□□ -1.03
TOPBP1-202ENST00000503338 AFF1P51825 1210 aaKnown RBP8.61□□□□□ -1.03
TOPBP1-202ENST00000503338 CKAP4Q07065 602 aaKnown RBP8.61□□□□□ -1.03
TOPBP1-202ENST00000503338 BST2Q10589 180 aaKnown RBP8.61□□□□□ -1.03
TOPBP1-202ENST00000503338 PPIGQ13427 754 aaKnown RBP eCLIP8.61□□□□□ -1.03
TOPBP1-202ENST00000503338 ZNF268Q14587 947 aaPredicted RBP8.61□□□□□ -1.03
TOPBP1-202ENST00000503338 CLUL1Q15846 466 aa8.61□□□□□ -1.03
TOPBP1-202ENST00000503338 WHAMMP3Q1A5X7 153 aa8.61□□□□□ -1.03
TOPBP1-202ENST00000503338 WSCD1Q658N2 575 aa8.61□□□□□ -1.03
TOPBP1-202ENST00000503338 PLEKHA7Q6IQ23 1121 aa8.61□□□□□ -1.03
TOPBP1-202ENST00000503338 PEX26Q7Z412 305 aa8.61□□□□□ -1.03
TOPBP1-202ENST00000503338 UBE2Q1Q7Z7E8 422 aa8.61□□□□□ -1.03
TOPBP1-202ENST00000503338 SLFN11Q7Z7L1 901 aa8.61□□□□□ -1.03
TOPBP1-202ENST00000503338 DAAM2Q86T65 1068 aa8.61□□□□□ -1.03
TOPBP1-202ENST00000503338 ACOT1Q86TX2 421 aa8.61□□□□□ -1.03
TOPBP1-202ENST00000503338 PASD1Q8IV76 773 aa8.61□□□□□ -1.03
TOPBP1-202ENST00000503338 CRIPAKQ8N1N5 446 aa8.61□□□□□ -1.03
TOPBP1-202ENST00000503338 CEP112Q8N8E3 955 aa8.61□□□□□ -1.03
TOPBP1-202ENST00000503338 ANKRD52Q8NB46 1076 aa8.61□□□□□ -1.03
TOPBP1-202ENST00000503338 B3GALNT2Q8NCR0 500 aa8.61□□□□□ -1.03
TOPBP1-202ENST00000503338 C1orf131Q8NDD1 294 aaKnown RBP8.61□□□□□ -1.03
TOPBP1-202ENST00000503338 MNS1Q8NEH6 495 aa8.61□□□□□ -1.03
TOPBP1-202ENST00000503338 C18orf8Q96DM3 657 aa8.61□□□□□ -1.03
TOPBP1-202ENST00000503338 HSFY1Q96LI6 401 aa8.61□□□□□ -1.03
TOPBP1-202ENST00000503338 CASD1Q96PB1 797 aa8.61□□□□□ -1.03
TOPBP1-202ENST00000503338 HNRNPABQ99729 332 aaKnown RBP8.61□□□□□ -1.03
TOPBP1-202ENST00000503338 ACBD6Q9BR61 282 aa8.61□□□□□ -1.03
TOPBP1-202ENST00000503338 NUP85Q9BW27 656 aa8.61□□□□□ -1.03
TOPBP1-202ENST00000503338 SYNCQ9H7C4 482 aa8.61□□□□□ -1.03
TOPBP1-202ENST00000503338 PRDM5Q9NQX1 630 aaPredicted RBP8.61□□□□□ -1.03
TOPBP1-202ENST00000503338 RNF19AQ9NV58 838 aa8.61□□□□□ -1.03
TOPBP1-202ENST00000503338 DDX43Q9NXZ2 648 aaKnown RBP8.61□□□□□ -1.03
TOPBP1-202ENST00000503338 STK39Q9UEW8 545 aa8.61□□□□□ -1.03
TOPBP1-202ENST00000503338 HMGXB4Q9UGU5 601 aa8.61□□□□□ -1.03
TOPBP1-202ENST00000503338 SALL4Q9UJQ4 1053 aa8.61□□□□□ -1.03
TOPBP1-202ENST00000503338 CDC23Q9UJX2 597 aa8.61□□□□□ -1.03
TOPBP1-202ENST00000503338 TSPAN16Q9UKR8 245 aa8.61□□□□□ -1.03
TOPBP1-202ENST00000503338 AMFRQ9UKV5 643 aa8.61□□□□□ -1.03
TOPBP1-202ENST00000503338 TFR2Q9UP52 801 aa8.61□□□□□ -1.03
TOPBP1-202ENST00000503338 HYOU1Q9Y4L1 999 aa8.61□□□□□ -1.03
TOPBP1-202ENST00000503338 TTC3P53804 2025 aa8.61□□□□□ -1.03
TOPBP1-202ENST00000503338 HTTP42858 3142 aa8.6□□□□□ -1.03
TOPBP1-202ENST00000503338 SF3B1O75533 1304 aaKnown RBP eCLIP8.6□□□□□ -1.03
TOPBP1-202ENST00000503338 GRID2IPA4D2P6 1211 aa8.6□□□□□ -1.03
TOPBP1-202ENST00000503338 TBKBP1A7MCY6 615 aa8.6□□□□□ -1.03
TOPBP1-202ENST00000503338 TADA2AO75478 443 aa8.6□□□□□ -1.03
TOPBP1-202ENST00000503338 PDGFRBP09619 1106 aa8.6□□□□□ -1.03
TOPBP1-202ENST00000503338 PTPN1P18031 435 aaKnown RBP8.6□□□□□ -1.03
TOPBP1-202ENST00000503338 SCNN1AP37088 669 aa8.6□□□□□ -1.03
TOPBP1-202ENST00000503338 GABRB2P47870 512 aa8.6□□□□□ -1.03
TOPBP1-202ENST00000503338 OR1G1P47890 313 aa8.6□□□□□ -1.03
TOPBP1-202ENST00000503338 TSPY1Q01534 308 aa8.6□□□□□ -1.03
TOPBP1-202ENST00000503338 PLCB3Q01970 1234 aa8.6□□□□□ -1.03
TOPBP1-202ENST00000503338 YWHAHQ04917 246 aaPredicted RBP8.6□□□□□ -1.03
TOPBP1-202ENST00000503338 SMARCB1Q12824 385 aa8.6□□□□□ -1.03
TOPBP1-202ENST00000503338 RPS6KA1Q15418 735 aa8.6□□□□□ -1.03
TOPBP1-202ENST00000503338 GOLGA7BQ2TAP0 167 aa8.6□□□□□ -1.03
TOPBP1-202ENST00000503338 PKDCCQ504Y2 493 aa8.6□□□□□ -1.03
TOPBP1-202ENST00000503338 TIGD5Q53EQ6 642 aa8.6□□□□□ -1.03
TOPBP1-202ENST00000503338 PPP1R26Q5T8A7 1209 aaPredicted RBP8.6□□□□□ -1.03
TOPBP1-202ENST00000503338 MEI1Q5TIA1 1274 aa8.6□□□□□ -1.03
TOPBP1-202ENST00000503338 OVOS1Q6IE37 1185 aa8.6□□□□□ -1.03
TOPBP1-202ENST00000503338 DENND1BQ6P3S1 775 aa8.6□□□□□ -1.03
TOPBP1-202ENST00000503338 DNAJC24Q6P3W2 148 aa8.6□□□□□ -1.03
TOPBP1-202ENST00000503338 MMS22LQ6ZRQ5 1243 aa8.6□□□□□ -1.03
TOPBP1-202ENST00000503338 UBL4BQ8N7F7 174 aa8.6□□□□□ -1.03
TOPBP1-202ENST00000503338 LRRC57Q8N9N7 239 aa8.6□□□□□ -1.03
TOPBP1-202ENST00000503338 C3orf20Q8ND61 904 aa8.6□□□□□ -1.03
TOPBP1-202ENST00000503338 TOP1MTQ969P6 601 aa8.6□□□□□ -1.03
TOPBP1-202ENST00000503338 ARHGEF26Q96DR7 871 aa8.6□□□□□ -1.03
TOPBP1-202ENST00000503338 PBKQ96KB5 322 aa8.6□□□□□ -1.03
TOPBP1-202ENST00000503338 RPGRIP1Q96KN7 1286 aa8.6□□□□□ -1.03
TOPBP1-202ENST00000503338 NCAPGQ9BPX3 1015 aa8.6□□□□□ -1.03
TOPBP1-202ENST00000503338 SYT15Q9BQS2 421 aa8.6□□□□□ -1.03
TOPBP1-202ENST00000503338 ZSWIM1Q9BR11 485 aa8.6□□□□□ -1.03
TOPBP1-202ENST00000503338 C11orf70Q9BRQ4 267 aa8.6□□□□□ -1.03
TOPBP1-202ENST00000503338 HTATIP2Q9BUP3 242 aa8.6□□□□□ -1.03
TOPBP1-202ENST00000503338 SELENOOQ9BVL4 669 aa8.6□□□□□ -1.03
TOPBP1-202ENST00000503338 PLVAPQ9BX97 442 aa8.6□□□□□ -1.03
TOPBP1-202ENST00000503338 NRDE2Q9H7Z3 1164 aa8.6□□□□□ -1.03
TOPBP1-202ENST00000503338 OSGEPQ9NPF4 335 aa8.6□□□□□ -1.03
TOPBP1-202ENST00000503338 IL23AQ9NPF7 189 aa8.6□□□□□ -1.03
TOPBP1-202ENST00000503338 ADAM28Q9UKQ2 775 aa8.6□□□□□ -1.03
TOPBP1-202ENST00000503338 SNX12Q9UMY4 172 aa8.6□□□□□ -1.03
TOPBP1-202ENST00000503338 FAN1Q9Y2M0 1017 aa8.6□□□□□ -1.03
TOPBP1-202ENST00000503338 MRFAP1Q9Y605 127 aa8.6□□□□□ -1.03
TOPBP1-202ENST00000503338 TDRD15B5MCY1 1934 aaKnown RBP8.59□□□□□ -1.03
TOPBP1-202ENST00000503338 TRIM43BA6NCK2 446 aa8.59□□□□□ -1.03
TOPBP1-202ENST00000503338 SPDYE4A6NLX3 237 aa8.59□□□□□ -1.03
TOPBP1-202ENST00000503338 XPO1O14980 1071 aaKnown RBP8.59□□□□□ -1.03
TOPBP1-202ENST00000503338 BUB1BO60566 1050 aaPredicted RBP8.59□□□□□ -1.03
TOPBP1-202ENST00000503338 DGKIO75912 1065 aa8.59□□□□□ -1.03
TOPBP1-202ENST00000503338 DDHD2O94830 711 aa8.59□□□□□ -1.03
TOPBP1-202ENST00000503338 OAZ2O95190 189 aa8.59□□□□□ -1.03
TOPBP1-202ENST00000503338 SLU7O95391 586 aaKnown RBP8.59□□□□□ -1.03
TOPBP1-202ENST00000503338 CALCAP01258 141 aa8.59□□□□□ -1.03
TOPBP1-202ENST00000503338 ATP1A1P05023 1023 aaKnown RBP8.59□□□□□ -1.03
TOPBP1-202ENST00000503338 CSF2RAP15509 400 aa8.59□□□□□ -1.03
TOPBP1-202ENST00000503338 RRM1P23921 792 aa8.59□□□□□ -1.03
TOPBP1-202ENST00000503338 LMO2P25791 158 aa8.59□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms