RNA–Protein interactions for RNA: ENST00000503060.5

USP46-204, Transcript of ubiquitin specific peptidase 46, humanhuman

TSL 5

Gene USP46, Length 2,437 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP46-204ENST00000503060 COILP38432 576 aaPredicted RBP12.24□□□□□ -0.45
USP46-204ENST00000503060 DRG2P55039 364 aaKnown RBP12.24□□□□□ -0.45
USP46-204ENST00000503060 CCDC137Q6PK04 289 aaKnown RBP12.24□□□□□ -0.45
USP46-204ENST00000503060 CCDC89Q8N998 374 aa12.24□□□□□ -0.45
USP46-204ENST00000503060 GADD45GIP1Q8TAE8 222 aaPredicted RBP12.24□□□□□ -0.45
USP46-204ENST00000503060 PBXIP1Q96AQ6 731 aa12.24□□□□□ -0.45
USP46-204ENST00000503060 ARL8AQ96BM9 186 aa12.24□□□□□ -0.45
USP46-204ENST00000503060 SLC39A13Q96H72 371 aa12.24□□□□□ -0.45
USP46-204ENST00000503060 FAXDC2Q96IV6 333 aa12.24□□□□□ -0.45
USP46-204ENST00000503060 BCO2Q9BYV7 579 aa12.24□□□□□ -0.45
USP46-204ENST00000503060 ZNF518BQ9C0D4 1074 aa12.24□□□□□ -0.45
USP46-204ENST00000503060 IQCGQ9H095 443 aaKnown RBP12.24□□□□□ -0.45
USP46-204ENST00000503060 SLC5A4Q9NY91 659 aa12.24□□□□□ -0.45
USP46-204ENST00000503060 IKBKGQ9Y6K9 419 aa12.24□□□□□ -0.45
USP46-204ENST00000503060 ZNF236Q9UL36 1845 aa12.24□□□□□ -0.45
USP46-204ENST00000503060 BOLA2-SMG1P6H3BVE0 249 aa12.23□□□□□ -0.45
USP46-204ENST00000503060 PSTPIP1O43586 416 aa12.23□□□□□ -0.45
USP46-204ENST00000503060 HSD17B3P37058 310 aa12.23□□□□□ -0.45
USP46-204ENST00000503060 RAP1GAPP47736 663 aa12.23□□□□□ -0.45
USP46-204ENST00000503060 FNTAP49354 379 aa12.23□□□□□ -0.45
USP46-204ENST00000503060 UAP1Q16222 522 aaPredicted RBP12.23□□□□□ -0.45
USP46-204ENST00000503060 SLC10A6Q3KNW5 377 aa12.23□□□□□ -0.45
USP46-204ENST00000503060 TTMPQ5BVD1 217 aa12.23□□□□□ -0.45
USP46-204ENST00000503060 ZNF410Q86VK4 478 aa12.23□□□□□ -0.45
USP46-204ENST00000503060 SUGP1Q8IWZ8 645 aaKnown RBP12.23□□□□□ -0.45
USP46-204ENST00000503060 RHOT1Q8IXI2 618 aa12.23□□□□□ -0.45
USP46-204ENST00000503060 TMEM130Q8N3G9 435 aa12.23□□□□□ -0.45
USP46-204ENST00000503060 FAM76AQ8TAV0 307 aa12.23□□□□□ -0.45
USP46-204ENST00000503060 MKS1Q9NXB0 559 aa12.23□□□□□ -0.45
USP46-204ENST00000503060 CPA4Q9UI42 421 aa12.23□□□□□ -0.45
USP46-204ENST00000503060 PLAAQ9Y263 795 aa12.23□□□□□ -0.45
USP46-204ENST00000503060 PODXLO00592 558 aa12.23□□□□□ -0.45
USP46-204ENST00000503060 ERLIN2O94905 339 aa12.23□□□□□ -0.45
USP46-204ENST00000503060 ITGB3P05106 788 aa12.23□□□□□ -0.45
USP46-204ENST00000503060 CCDC159P0C7I6 412 aa12.23□□□□□ -0.45
USP46-204ENST00000503060 EIF4BP23588 611 aaKnown RBP12.23□□□□□ -0.45
USP46-204ENST00000503060 TAS2R40P59535 323 aa12.23□□□□□ -0.45
USP46-204ENST00000503060 LACTBP83111 547 aaPredicted RBP12.23□□□□□ -0.45
USP46-204ENST00000503060 TMED1Q13445 227 aa12.23□□□□□ -0.45
USP46-204ENST00000503060 WDR72Q3MJ13 1102 aa12.23□□□□□ -0.45
USP46-204ENST00000503060 DAB2IPQ5VWQ8 1189 aa12.23□□□□□ -0.45
USP46-204ENST00000503060 LRIG3Q6UXM1 1119 aa12.23□□□□□ -0.45
USP46-204ENST00000503060 WDTC1Q8N5D0 677 aa12.23□□□□□ -0.45
USP46-204ENST00000503060 MAIP1Q8WWC4 291 aa12.23□□□□□ -0.45
USP46-204ENST00000503060 SDCBP2Q9H190 292 aa12.23□□□□□ -0.45
USP46-204ENST00000503060 LRRC19Q9H756 370 aa12.23□□□□□ -0.45
USP46-204ENST00000503060 ZDHHC18Q9NUE0 388 aa12.23□□□□□ -0.45
USP46-204ENST00000503060 SETD4Q9NVD3 440 aa12.23□□□□□ -0.45
USP46-204ENST00000503060 SNX24Q9Y343 169 aa12.23□□□□□ -0.45
USP46-204ENST00000503060 A0A1B0GUA9 196 aa12.22□□□□□ -0.45
USP46-204ENST00000503060 TCRBV5S1A1TA0A578 114 aa12.22□□□□□ -0.45
USP46-204ENST00000503060 TMEM191CA6NGB0 347 aa12.22□□□□□ -0.45
USP46-204ENST00000503060 RRN3P2A6NIE6 340 aa12.22□□□□□ -0.45
USP46-204ENST00000503060 DYNC1LI2O43237 492 aaPredicted RBP12.22□□□□□ -0.45
USP46-204ENST00000503060 RNASEH2AO75792 299 aaKnown RBP12.22□□□□□ -0.45
USP46-204ENST00000503060 MTMR3Q13615 1198 aa12.22□□□□□ -0.45
USP46-204ENST00000503060 TMEM132DQ14C87 1099 aa12.22□□□□□ -0.45
USP46-204ENST00000503060 LLGL1Q15334 1064 aa12.22□□□□□ -0.45
USP46-204ENST00000503060 MORN1Q5T089 497 aa12.22□□□□□ -0.45
USP46-204ENST00000503060 DNAJC24Q6P3W2 148 aa12.22□□□□□ -0.45
USP46-204ENST00000503060 TMC3Q7Z5M5 1100 aa12.22□□□□□ -0.45
USP46-204ENST00000503060 CCDC105Q8IYK2 499 aa12.22□□□□□ -0.45
USP46-204ENST00000503060 GIMAP1Q8WWP7 306 aa12.22□□□□□ -0.45
USP46-204ENST00000503060 FMO2Q99518 471 aa12.22□□□□□ -0.45
USP46-204ENST00000503060 VRTNQ9H8Y1 702 aa12.22□□□□□ -0.45
USP46-204ENST00000503060 LZTS1Q9Y250 596 aa12.22□□□□□ -0.45
USP46-204ENST00000503060 O00370 1275 aa12.22□□□□□ -0.45
USP46-204ENST00000503060 KRT14P02533 472 aa12.22□□□□□ -0.45
USP46-204ENST00000503060 PAEPP09466 180 aa12.22□□□□□ -0.45
USP46-204ENST00000503060 CD19P15391 556 aa12.22□□□□□ -0.45
USP46-204ENST00000503060 RAD23BP54727 409 aa12.22□□□□□ -0.45
USP46-204ENST00000503060 CDH8P55286 799 aa12.22□□□□□ -0.45
USP46-204ENST00000503060 RPL7AP62424 266 aaKnown RBP12.22□□□□□ -0.45
USP46-204ENST00000503060 DHX9Q08211 1270 aaKnown RBP12.22□□□□□ -0.45
USP46-204ENST00000503060 MAP2K5Q13163 448 aa12.22□□□□□ -0.45
USP46-204ENST00000503060 SGO2Q562F6 1265 aa12.22□□□□□ -0.45
USP46-204ENST00000503060 PRAMEF19Q5SWL8 479 aa12.22□□□□□ -0.45
USP46-204ENST00000503060 CST9Q5W186 159 aa12.22□□□□□ -0.45
USP46-204ENST00000503060 ZCCHC8Q6NZY4 707 aaKnown RBP12.22□□□□□ -0.45
USP46-204ENST00000503060 DENND1BQ6P3S1 775 aa12.22□□□□□ -0.45
USP46-204ENST00000503060 ZDHHC24Q6UX98 284 aa12.22□□□□□ -0.45
USP46-204ENST00000503060 ILDR2Q71H61 639 aa12.22□□□□□ -0.45
USP46-204ENST00000503060 KATNAL2Q8IYT4 538 aa12.22□□□□□ -0.45
USP46-204ENST00000503060 ERP27Q96DN0 273 aa12.22□□□□□ -0.45
USP46-204ENST00000503060 ACAP3Q96P50 834 aa12.22□□□□□ -0.45
USP46-204ENST00000503060 ADPGKQ9BRR6 497 aa12.22□□□□□ -0.45
USP46-204ENST00000503060 HERPUD2Q9BSE4 406 aa12.22□□□□□ -0.45
USP46-204ENST00000503060 LDHAL6BQ9BYZ2 381 aaPredicted RBP12.22□□□□□ -0.45
USP46-204ENST00000503060 SMYD3Q9H7B4 428 aa12.22□□□□□ -0.45
USP46-204ENST00000503060 IRAK4Q9NWZ3 460 aa12.22□□□□□ -0.45
USP46-204ENST00000503060 MED7O43513 233 aa12.21□□□□□ -0.45
USP46-204ENST00000503060 FGFR4P22455 802 aa12.21□□□□□ -0.45
USP46-204ENST00000503060 POLR2BP30876 1174 aaKnown RBP12.21□□□□□ -0.45
USP46-204ENST00000503060 GBP1P32455 592 aa12.21□□□□□ -0.45
USP46-204ENST00000503060 KCNJ1P48048 391 aa12.21□□□□□ -0.45
USP46-204ENST00000503060 ERICH1Q86X53 443 aa12.21□□□□□ -0.45
USP46-204ENST00000503060 SAMD14Q8IZD0 417 aaPredicted RBP12.21□□□□□ -0.45
USP46-204ENST00000503060 C1orf54Q8WWF1 131 aa12.21□□□□□ -0.45
USP46-204ENST00000503060 ADAMTS10Q9H324 1103 aa12.21□□□□□ -0.45
USP46-204ENST00000503060 CYP3A43Q9HB55 503 aa12.21□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms