RNA–Protein interactions for RNA: ENST00000502948.1

LSM3P4-201, Transcript of LSM3 homolog, U6 small nuclear RNA and mRNA degradation associated pseudogene 4, humanhuman

BASIC

Gene LSM3P4, Length 309 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM3P4-201ENST00000502948 MGAT5BQ3V5L5 792 aa6.58□□□□□ -1.36
LSM3P4-201ENST00000502948 SLC39A12Q504Y0 691 aa6.58□□□□□ -1.36
LSM3P4-201ENST00000502948 PLA2G2CQ5R387 149 aa6.58□□□□□ -1.36
LSM3P4-201ENST00000502948 STXBP5Q5T5C0 1151 aa6.58□□□□□ -1.36
LSM3P4-201ENST00000502948 MCTP1Q6DN14 999 aa6.58□□□□□ -1.36
LSM3P4-201ENST00000502948 SYT13Q7L8C5 426 aa6.58□□□□□ -1.36
LSM3P4-201ENST00000502948 CACNA2D4Q7Z3S7 1137 aa6.58□□□□□ -1.36
LSM3P4-201ENST00000502948 ARHGAP30Q7Z6I6 1101 aaPredicted RBP6.58□□□□□ -1.36
LSM3P4-201ENST00000502948 LRRTM3Q86VH5 581 aa6.58□□□□□ -1.36
LSM3P4-201ENST00000502948 FAM160A2Q8N612 972 aaPredicted RBP6.58□□□□□ -1.36
LSM3P4-201ENST00000502948 TOP6BLQ8N6T0 577 aa6.58□□□□□ -1.36
LSM3P4-201ENST00000502948 CXorf38Q8TB03 319 aa6.58□□□□□ -1.36
LSM3P4-201ENST00000502948 LRRC15Q8TF66 581 aa6.58□□□□□ -1.36
LSM3P4-201ENST00000502948 CACTINQ8WUQ7 758 aaKnown RBP6.58□□□□□ -1.36
LSM3P4-201ENST00000502948 USP13Q92995 863 aaPredicted RBP6.58□□□□□ -1.36
LSM3P4-201ENST00000502948 CHFRQ96EP1 664 aa6.58□□□□□ -1.36
LSM3P4-201ENST00000502948 PKMYT1Q99640 499 aa6.58□□□□□ -1.36
LSM3P4-201ENST00000502948 DUSP9Q99956 384 aaKnown RBP6.58□□□□□ -1.36
LSM3P4-201ENST00000502948 HPS4Q9NQG7 708 aa6.58□□□□□ -1.36
LSM3P4-201ENST00000502948 TDP1Q9NUW8 608 aa6.58□□□□□ -1.36
LSM3P4-201ENST00000502948 EHD2Q9NZN4 543 aa6.58□□□□□ -1.36
LSM3P4-201ENST00000502948 CCDC39Q9UFE4 941 aa6.58□□□□□ -1.36
LSM3P4-201ENST00000502948 ITGA11Q9UKX5 1188 aa6.58□□□□□ -1.36
LSM3P4-201ENST00000502948 PCDHB13Q9Y5F0 798 aa6.58□□□□□ -1.36
LSM3P4-201ENST00000502948 NUP205Q92621 2012 aa6.58□□□□□ -1.36
LSM3P4-201ENST00000502948 A0A0A0MRY4 1105 aa6.57□□□□□ -1.36
LSM3P4-201ENST00000502948 NPHP3-ACAD11A0A0J9YXS1 232 aa6.57□□□□□ -1.36
LSM3P4-201ENST00000502948 ANKRD63C9JTQ0 380 aa6.57□□□□□ -1.36
LSM3P4-201ENST00000502948 HUS1O60921 280 aa6.57□□□□□ -1.36
LSM3P4-201ENST00000502948 RPP40O75818 363 aaKnown RBP6.57□□□□□ -1.36
LSM3P4-201ENST00000502948 PRAMEF12O95522 483 aa6.57□□□□□ -1.36
LSM3P4-201ENST00000502948 KRT18P05783 430 aaKnown RBP6.57□□□□□ -1.36
LSM3P4-201ENST00000502948 PDCP20941 246 aa6.57□□□□□ -1.36
LSM3P4-201ENST00000502948 PCSK1P29120 753 aa6.57□□□□□ -1.36
LSM3P4-201ENST00000502948 NMT1P30419 496 aaKnown RBP6.57□□□□□ -1.36
LSM3P4-201ENST00000502948 FNTBP49356 437 aa6.57□□□□□ -1.36
LSM3P4-201ENST00000502948 ACOT2P49753 483 aa6.57□□□□□ -1.36
LSM3P4-201ENST00000502948 SNRPFP62306 86 aaKnown RBP6.57□□□□□ -1.36
LSM3P4-201ENST00000502948 MYL7Q01449 175 aa6.57□□□□□ -1.36
LSM3P4-201ENST00000502948 MCM6Q14566 821 aa6.57□□□□□ -1.36
LSM3P4-201ENST00000502948 PON2Q15165 354 aa6.57□□□□□ -1.36
LSM3P4-201ENST00000502948 SF3A1Q15459 793 aaKnown RBP6.57□□□□□ -1.36
LSM3P4-201ENST00000502948 SURF1Q15526 300 aa6.57□□□□□ -1.36
LSM3P4-201ENST00000502948 MAPRE1Q15691 268 aaKnown RBP6.57□□□□□ -1.36
LSM3P4-201ENST00000502948 ZRSR1Q15695 479 aaKnown RBP6.57□□□□□ -1.36
LSM3P4-201ENST00000502948 TAF12Q16514 161 aa6.57□□□□□ -1.36
LSM3P4-201ENST00000502948 HSF5Q4G112 596 aaPredicted RBP6.57□□□□□ -1.36
LSM3P4-201ENST00000502948 INTS6LQ5JSJ4 861 aaKnown RBP6.57□□□□□ -1.36
LSM3P4-201ENST00000502948 L1TD1Q5T7N2 865 aaKnown RBP6.57□□□□□ -1.36
LSM3P4-201ENST00000502948 WSCD1Q658N2 575 aa6.57□□□□□ -1.36
LSM3P4-201ENST00000502948 LARP1BQ659C4 914 aaKnown RBP6.57□□□□□ -1.36
LSM3P4-201ENST00000502948 FSTL4Q6MZW2 842 aa6.57□□□□□ -1.36
LSM3P4-201ENST00000502948 FAM171BQ6P995 826 aa6.57□□□□□ -1.36
LSM3P4-201ENST00000502948 VSTM1Q6UX27 236 aa6.57□□□□□ -1.36
LSM3P4-201ENST00000502948 PRR23BQ6ZRT6 265 aa6.57□□□□□ -1.36
LSM3P4-201ENST00000502948 Q6ZS52 159 aa6.57□□□□□ -1.36
LSM3P4-201ENST00000502948 BRSK2Q8IWQ3 736 aa6.57□□□□□ -1.36
LSM3P4-201ENST00000502948 EFCAB13Q8IY85 973 aa6.57□□□□□ -1.36
LSM3P4-201ENST00000502948 TTC9BQ8N6N2 239 aa6.57□□□□□ -1.36
LSM3P4-201ENST00000502948 FSIP1Q8NA03 581 aa6.57□□□□□ -1.36
LSM3P4-201ENST00000502948 OSCP1Q8WVF1 389 aa6.57□□□□□ -1.36
LSM3P4-201ENST00000502948 POMGNT1Q8WZA1 660 aa6.57□□□□□ -1.36
LSM3P4-201ENST00000502948 MRPS31Q92665 395 aaKnown RBP6.57□□□□□ -1.36
LSM3P4-201ENST00000502948 DNAJC19Q96DA6 116 aa6.57□□□□□ -1.36
LSM3P4-201ENST00000502948 SPATA17Q96L03 361 aa6.57□□□□□ -1.36
LSM3P4-201ENST00000502948 SEPT5Q99719 369 aaPredicted RBP6.57□□□□□ -1.36
LSM3P4-201ENST00000502948 LPIN3Q9BQK8 851 aa6.57□□□□□ -1.36
LSM3P4-201ENST00000502948 PYM1Q9BRP8 204 aaKnown RBP6.57□□□□□ -1.36
LSM3P4-201ENST00000502948 KIAA1586Q9HCI6 787 aa6.57□□□□□ -1.36
LSM3P4-201ENST00000502948 GKN1Q9NS71 199 aa6.57□□□□□ -1.36
LSM3P4-201ENST00000502948 SRPRBQ9Y5M8 271 aaKnown RBP6.57□□□□□ -1.36
LSM3P4-201ENST00000502948 DYNC1LI1Q9Y6G9 523 aaKnown RBP6.57□□□□□ -1.36
LSM3P4-201ENST00000502948 TNRC6BQ9UPQ9 1833 aaKnown RBP6.56□□□□□ -1.36
LSM3P4-201ENST00000502948 LOC105378220A0A1B0GUY1 285 aaPredicted RBP6.56□□□□□ -1.36
LSM3P4-201ENST00000502948 DCDC2BA2VCK2 349 aa6.56□□□□□ -1.36
LSM3P4-201ENST00000502948 EXTL3O43909 919 aa6.56□□□□□ -1.36
LSM3P4-201ENST00000502948 USP17L7P0C7H9 530 aa6.56□□□□□ -1.36
LSM3P4-201ENST00000502948 PMLP29590 882 aa6.56□□□□□ -1.36
LSM3P4-201ENST00000502948 GJA4P35212 333 aa6.56□□□□□ -1.36
LSM3P4-201ENST00000502948 TXLNAP40222 546 aa6.56□□□□□ -1.36
LSM3P4-201ENST00000502948 EIF2DP41214 584 aaKnown RBP6.56□□□□□ -1.36
LSM3P4-201ENST00000502948 DPP6P42658 865 aa6.56□□□□□ -1.36
LSM3P4-201ENST00000502948 SOX9P48436 509 aa6.56□□□□□ -1.36
LSM3P4-201ENST00000502948 GUCY2FP51841 1108 aa6.56□□□□□ -1.36
LSM3P4-201ENST00000502948 NOP14P78316 857 aaKnown RBP6.56□□□□□ -1.36
LSM3P4-201ENST00000502948 TNK2Q07912 1038 aa6.56□□□□□ -1.36
LSM3P4-201ENST00000502948 DMWDQ09019 674 aa6.56□□□□□ -1.36
LSM3P4-201ENST00000502948 BFSP1Q12934 665 aa6.56□□□□□ -1.36
LSM3P4-201ENST00000502948 MYO1EQ12965 1108 aa6.56□□□□□ -1.36
LSM3P4-201ENST00000502948 USP4Q13107 963 aa6.56□□□□□ -1.36
LSM3P4-201ENST00000502948 NR1H3Q13133 447 aa6.56□□□□□ -1.36
LSM3P4-201ENST00000502948 CUL4AQ13619 759 aa6.56□□□□□ -1.36
LSM3P4-201ENST00000502948 ZNF77Q15935 545 aa6.56□□□□□ -1.36
LSM3P4-201ENST00000502948 ZC2HC1CQ53FD0 456 aaPredicted RBP6.56□□□□□ -1.36
LSM3P4-201ENST00000502948 PPM1JQ5JR12 505 aa6.56□□□□□ -1.36
LSM3P4-201ENST00000502948 SPDYCQ5MJ68 293 aa6.56□□□□□ -1.36
LSM3P4-201ENST00000502948 CC2D1AQ6P1N0 951 aaPredicted RBP6.56□□□□□ -1.36
LSM3P4-201ENST00000502948 CNNM4Q6P4Q7 775 aa6.56□□□□□ -1.36
LSM3P4-201ENST00000502948 C4orf50Q6ZRC1 276 aa6.56□□□□□ -1.36
LSM3P4-201ENST00000502948 CCDC73Q6ZRK6 1079 aa6.56□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 65.1 ms