RNA–Protein interactions for RNA: ENST00000502781.5

LSM6-202, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM6, Length 1,352 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-202ENST00000502781 GTF3C4Q9UKN8 822 aa26.82■■□□□ 1.88
LSM6-202ENST00000502781 UNC80Q8N2C7 3258 aa26.81■■□□□ 1.88
LSM6-202ENST00000502781 MTHFRP42898 656 aa26.81■■□□□ 1.88
LSM6-202ENST00000502781 CBX2Q14781 532 aaPredicted RBP26.81■■□□□ 1.88
LSM6-202ENST00000502781 ATAT1Q5SQI0 421 aa26.81■■□□□ 1.88
LSM6-202ENST00000502781 TTC9BQ8N6N2 239 aa26.81■■□□□ 1.88
LSM6-202ENST00000502781 RIPOR3Q96MK2 946 aa26.81■■□□□ 1.88
LSM6-202ENST00000502781 DPEP3Q9H4B8 488 aa26.81■■□□□ 1.88
LSM6-202ENST00000502781 ABCB6Q9NP58 842 aa26.81■■□□□ 1.88
LSM6-202ENST00000502781 YIPF1Q9Y548 306 aa26.81■■□□□ 1.88
LSM6-202ENST00000502781 PCDHB5Q9Y5E4 795 aa26.81■■□□□ 1.88
LSM6-202ENST00000502781 GTPBP10A4D1E9 387 aaKnown RBP26.8■■□□□ 1.88
LSM6-202ENST00000502781 ZNF18P17022 549 aa26.8■■□□□ 1.88
LSM6-202ENST00000502781 PSMC1P62191 440 aaKnown RBP26.8■■□□□ 1.88
LSM6-202ENST00000502781 MAPRE1Q15691 268 aaKnown RBP26.8■■□□□ 1.88
LSM6-202ENST00000502781 CFAP221Q4G0U5 840 aa26.8■■□□□ 1.88
LSM6-202ENST00000502781 TJAP1Q5JTD0 557 aa26.8■■□□□ 1.88
LSM6-202ENST00000502781 AOPEPQ8N6M6 819 aa26.8■■□□□ 1.88
LSM6-202ENST00000502781 MYCBPAPQ8TBZ2 947 aa26.8■■□□□ 1.88
LSM6-202ENST00000502781 SMG7Q92540 1137 aaKnown RBP26.8■■□□□ 1.88
LSM6-202ENST00000502781 FUBP3Q96I24 572 aaKnown RBP eCLIP26.8■■□□□ 1.882e-7■■■□□ 16.1
LSM6-202ENST00000502781 NECTIN4Q96NY8 510 aa26.8■■□□□ 1.88
LSM6-202ENST00000502781 ARID3AQ99856 593 aa26.8■■□□□ 1.88
LSM6-202ENST00000502781 NDST4Q9H3R1 872 aa26.8■■□□□ 1.88
LSM6-202ENST00000502781 CILPO75339 1184 aa26.79■■□□□ 1.88
LSM6-202ENST00000502781 PTPN1P18031 435 aaKnown RBP26.79■■□□□ 1.88
LSM6-202ENST00000502781 ZNF165P49910 485 aa26.79■■□□□ 1.88
LSM6-202ENST00000502781 NDST1P52848 882 aa26.79■■□□□ 1.88
LSM6-202ENST00000502781 CUL2Q13617 745 aa26.79■■□□□ 1.88
LSM6-202ENST00000502781 VWA3BQ502W6 1294 aa26.79■■□□□ 1.88
LSM6-202ENST00000502781 DHX40Q8IX18 779 aaKnown RBP26.79■■□□□ 1.88
LSM6-202ENST00000502781 CRYBG2Q8N1P7 616 aa26.79■■□□□ 1.88
LSM6-202ENST00000502781 B3GALNT2Q8NCR0 500 aa26.79■■□□□ 1.88
LSM6-202ENST00000502781 WHAMMQ8TF30 809 aa26.79■■□□□ 1.88
LSM6-202ENST00000502781 HMGXB4Q9UGU5 601 aa26.79■■□□□ 1.88
LSM6-202ENST00000502781 SLC27A5Q9Y2P5 690 aa26.79■■□□□ 1.88
LSM6-202ENST00000502781 CCL16O15467 120 aa26.78■■□□□ 1.88
LSM6-202ENST00000502781 XYLBO75191 536 aa26.78■■□□□ 1.88
LSM6-202ENST00000502781 HAPLN1P10915 354 aaPredicted RBP26.78■■□□□ 1.88
LSM6-202ENST00000502781 TUFMP49411 452 aaKnown RBP26.78■■□□□ 1.88
LSM6-202ENST00000502781 TTC39CQ8N584 583 aa26.78■■□□□ 1.88
LSM6-202ENST00000502781 PCED1BQ96HM7 432 aa26.78■■□□□ 1.88
LSM6-202ENST00000502781 TNIP3Q96KP6 325 aa26.78■■□□□ 1.88
LSM6-202ENST00000502781 NT5C1BQ96P26 610 aa26.78■■□□□ 1.88
LSM6-202ENST00000502781 INTS2Q9H0H0 1204 aaKnown RBP26.78■■□□□ 1.88
LSM6-202ENST00000502781 POMKQ9H5K3 350 aa26.78■■□□□ 1.88
LSM6-202ENST00000502781 ABI2Q9NYB9 513 aaPredicted RBP26.78■■□□□ 1.88
LSM6-202ENST00000502781 LRG1P02750 347 aa26.77■■□□□ 1.88
LSM6-202ENST00000502781 PRKCSHP14314 528 aaPredicted RBP26.77■■□□□ 1.88
LSM6-202ENST00000502781 TBXAS1P24557 533 aaPredicted RBP26.77■■□□□ 1.88
LSM6-202ENST00000502781 CDR1P51861 262 aa26.77■■□□□ 1.88
LSM6-202ENST00000502781 TWF1Q12792 350 aa26.77■■□□□ 1.88
LSM6-202ENST00000502781 LRMPQ12912 555 aa26.77■■□□□ 1.88
LSM6-202ENST00000502781 IQCB1Q15051 598 aa26.77■■□□□ 1.88
LSM6-202ENST00000502781 KRT31Q15323 416 aa26.77■■□□□ 1.88
LSM6-202ENST00000502781 C4orf50Q6ZRC1 276 aa26.77■■□□□ 1.88
LSM6-202ENST00000502781 UBR7Q8N806 425 aa26.77■■□□□ 1.88
LSM6-202ENST00000502781 MYLPFQ96A32 169 aa26.77■■□□□ 1.88
LSM6-202ENST00000502781 TWNKQ96RR1 684 aa26.77■■□□□ 1.88
LSM6-202ENST00000502781 WDR6Q9NNW5 1121 aaKnown RBP26.77■■□□□ 1.88
LSM6-202ENST00000502781 GCNT4Q9P109 453 aa26.77■■□□□ 1.88
LSM6-202ENST00000502781 CEP72Q9P209 647 aa26.77■■□□□ 1.88
LSM6-202ENST00000502781 LRRC10BA6NIK2 292 aa26.76■■□□□ 1.87
LSM6-202ENST00000502781 GCNT1Q02742 428 aa26.76■■□□□ 1.87
LSM6-202ENST00000502781 PLD1Q13393 1074 aa26.76■■□□□ 1.87
LSM6-202ENST00000502781 MDH1BQ5I0G3 518 aa26.76■■□□□ 1.87
LSM6-202ENST00000502781 GBP6Q6ZN66 633 aa26.76■■□□□ 1.87
LSM6-202ENST00000502781 LPIN3Q9BQK8 851 aa26.76■■□□□ 1.87
LSM6-202ENST00000502781 CISHQ9NSE2 258 aa26.76■■□□□ 1.87
LSM6-202ENST00000502781 PRKAG3Q9UGI9 489 aa26.76■■□□□ 1.87
LSM6-202ENST00000502781 CAVIN2O95810 425 aa26.75■■□□□ 1.87
LSM6-202ENST00000502781 ATF6P18850 670 aa26.75■■□□□ 1.87
LSM6-202ENST00000502781 CD58P19256 250 aa26.75■■□□□ 1.87
LSM6-202ENST00000502781 MAGEA11P43364 429 aa26.75■■□□□ 1.87
LSM6-202ENST00000502781 EXOC3L4Q17RC7 722 aa26.75■■□□□ 1.87
LSM6-202ENST00000502781 MGAT5BQ3V5L5 792 aa26.75■■□□□ 1.87
LSM6-202ENST00000502781 TRIM65Q6PJ69 517 aa26.75■■□□□ 1.87
LSM6-202ENST00000502781 SPATA2LQ8IUW3 424 aaPredicted RBP26.75■■□□□ 1.87
LSM6-202ENST00000502781 SEPT5Q99719 369 aaPredicted RBP26.75■■□□□ 1.87
LSM6-202ENST00000502781 CRACR2AQ9BSW2 395 aa26.75■■□□□ 1.87
LSM6-202ENST00000502781 PHF7Q9BWX1 381 aaPredicted RBP26.75■■□□□ 1.87
LSM6-202ENST00000502781 NT5C1AQ9BXI3 368 aa26.75■■□□□ 1.87
LSM6-202ENST00000502781 PIDD1Q9HB75 910 aa26.75■■□□□ 1.87
LSM6-202ENST00000502781 DNMT3BQ9UBC3 853 aaKnown RBP26.75■■□□□ 1.87
LSM6-202ENST00000502781 LIMA1Q9UHB6 759 aaKnown RBP26.75■■□□□ 1.87
LSM6-202ENST00000502781 SMTNL1A8MU46 457 aa26.74■■□□□ 1.87
LSM6-202ENST00000502781 SOAT2O75908 522 aa26.74■■□□□ 1.87
LSM6-202ENST00000502781 CYP2F1P24903 491 aa26.74■■□□□ 1.87
LSM6-202ENST00000502781 ALDH1A3P47895 512 aa26.74■■□□□ 1.87
LSM6-202ENST00000502781 PHLDB3Q6NSJ2 640 aa26.74■■□□□ 1.87
LSM6-202ENST00000502781 ACOT1Q86TX2 421 aa26.74■■□□□ 1.87
LSM6-202ENST00000502781 ARHGEF19Q8IW93 802 aa26.74■■□□□ 1.87
LSM6-202ENST00000502781 ELOVL4Q9GZR5 314 aa26.74■■□□□ 1.87
LSM6-202ENST00000502781 AVENQ9NQS1 362 aaPredicted RBP26.74■■□□□ 1.87
LSM6-202ENST00000502781 TAB2Q9NYJ8 693 aa26.74■■□□□ 1.87
LSM6-202ENST00000502781 C2orf16Q68DN1 1984 aa26.74■■□□□ 1.87
LSM6-202ENST00000502781 SLC9A1P19634 815 aa26.73■■□□□ 1.87
LSM6-202ENST00000502781 PON1P27169 355 aa26.73■■□□□ 1.87
LSM6-202ENST00000502781 VSTM1Q6UX27 236 aa26.73■■□□□ 1.87
LSM6-202ENST00000502781 APTXQ7Z2E3 356 aaKnown RBP26.73■■□□□ 1.87
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms