RNA–Protein interactions for RNA: ENST00000502357.5

LMNA-218, Transcript of lamin A/C, human

TSL 4

Gene LMNA, Length 537 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LMNA-218	ENST00000502357	KRT79	Q5XKE5	535 aa		13.7	□□□□□ -0.22
LMNA-218	ENST00000502357	PMS2CL	Q68D20	193 aa		13.7	□□□□□ -0.22
LMNA-218	ENST00000502357	ARMCX5	Q6P1M9	558 aa		13.7	□□□□□ -0.22
LMNA-218	ENST00000502357	MON1A	Q86VX9	555 aa		13.7	□□□□□ -0.22
LMNA-218	ENST00000502357	RASSF3	Q86WH2	238 aa		13.7	□□□□□ -0.22
LMNA-218	ENST00000502357	CCDC83	Q8IWF9	413 aa		13.7	□□□□□ -0.22
LMNA-218	ENST00000502357	RPLP0P6	Q8NHW5	317 aa		13.7	□□□□□ -0.22
LMNA-218	ENST00000502357	SLC22A12	Q96S37	553 aa		13.7	□□□□□ -0.22
LMNA-218	ENST00000502357	PKMYT1	Q99640	499 aa		13.7	□□□□□ -0.22
LMNA-218	ENST00000502357	P2RY13	Q9BPV8	354 aa		13.7	□□□□□ -0.22
LMNA-218	ENST00000502357	LLPH	Q9BRT6	129 aa	Known RBP	13.7	□□□□□ -0.22
LMNA-218	ENST00000502357	ECT2	Q9H8V3	914 aa		13.7	□□□□□ -0.22
LMNA-218	ENST00000502357	SH2B1	Q9NRF2	756 aa	Predicted RBP	13.7	□□□□□ -0.22
LMNA-218	ENST00000502357	ZMYM5	Q9UJ78	669 aa		13.7	□□□□□ -0.22
LMNA-218	ENST00000502357	TCHH	Q07283	1943 aa		13.7	□□□□□ -0.22
LMNA-218	ENST00000502357	PATE3	B3GLJ2	98 aa		13.69	□□□□□ -0.22
LMNA-218	ENST00000502357	CAVIN2	O95810	425 aa		13.69	□□□□□ -0.22
LMNA-218	ENST00000502357	CAPNS1	P04632	268 aa		13.69	□□□□□ -0.22
LMNA-218	ENST00000502357	HNRNPL	P14866	589 aa	Known RBP eCLIP	13.69	□□□□□ -0.22
LMNA-218	ENST00000502357	CSRP1	P21291	193 aa	Known RBP	13.69	□□□□□ -0.22
LMNA-218	ENST00000502357	ZNF131	P52739	623 aa		13.69	□□□□□ -0.22
LMNA-218	ENST00000502357	SMTN	P53814	917 aa		13.69	□□□□□ -0.22
LMNA-218	ENST00000502357	ZXDB	P98169	803 aa		13.69	□□□□□ -0.22
LMNA-218	ENST00000502357	SMARCB1	Q12824	385 aa		13.69	□□□□□ -0.22
LMNA-218	ENST00000502357	DMC1	Q14565	340 aa		13.69	□□□□□ -0.22
LMNA-218	ENST00000502357	ZNF77	Q15935	545 aa		13.69	□□□□□ -0.22
LMNA-218	ENST00000502357	FBXO43	Q4G163	708 aa		13.69	□□□□□ -0.22
LMNA-218	ENST00000502357	SH3PXD2A	Q5TCZ1	1133 aa		13.69	□□□□□ -0.22
LMNA-218	ENST00000502357	WSCD1	Q658N2	575 aa		13.69	□□□□□ -0.22
LMNA-218	ENST00000502357	CRELD2	Q6UXH1	353 aa	Predicted RBP	13.69	□□□□□ -0.22
LMNA-218	ENST00000502357	CD302	Q8IX05	232 aa		13.69	□□□□□ -0.22
LMNA-218	ENST00000502357	KCTD17	Q8N5Z5	321 aa		13.69	□□□□□ -0.22
LMNA-218	ENST00000502357	CXorf38	Q8TB03	319 aa		13.69	□□□□□ -0.22
LMNA-218	ENST00000502357	SPPL2B	Q8TCT7	592 aa		13.69	□□□□□ -0.22
LMNA-218	ENST00000502357	C2orf15	Q8WU43	125 aa	Known RBP	13.69	□□□□□ -0.22
LMNA-218	ENST00000502357	RPF1	Q9H9Y2	349 aa	Known RBP	13.69	□□□□□ -0.22
LMNA-218	ENST00000502357	KIF9	Q9HAQ2	790 aa		13.69	□□□□□ -0.22
LMNA-218	ENST00000502357	KCND2	Q9NZV8	630 aa		13.69	□□□□□ -0.22
LMNA-218	ENST00000502357	KCNG1	Q9UIX4	513 aa		13.69	□□□□□ -0.22
LMNA-218	ENST00000502357	DERA	Q9Y315	318 aa		13.69	□□□□□ -0.22
LMNA-218	ENST00000502357	STYXL1	Q9Y6J8	313 aa		13.69	□□□□□ -0.22
LMNA-218	ENST00000502357	CACNA1E	Q15878	2313 aa		13.69	□□□□□ -0.22
LMNA-218	ENST00000502357	SRRM3	A6NNA2	597 aa	Predicted RBP	13.68	□□□□□ -0.22
LMNA-218	ENST00000502357	TISP43	B9A030	160 aa		13.68	□□□□□ -0.22
LMNA-218	ENST00000502357	ANKRD63	C9JTQ0	380 aa		13.68	□□□□□ -0.22
LMNA-218	ENST00000502357		K7EQS6	105 aa		13.68	□□□□□ -0.22
LMNA-218	ENST00000502357	LAD1	O00515	517 aa		13.68	□□□□□ -0.22
LMNA-218	ENST00000502357	XPOT	O43592	962 aa	Known RBP	13.68	□□□□□ -0.22
LMNA-218	ENST00000502357	PLA2G4B	P0C869	781 aa		13.68	□□□□□ -0.22
LMNA-218	ENST00000502357	BCKDHB	P21953	392 aa		13.68	□□□□□ -0.22
LMNA-218	ENST00000502357	DDX6	P26196	483 aa	Known RBP eCLIP	13.68	□□□□□ -0.22
LMNA-218	ENST00000502357	WNT7B	P56706	349 aa		13.68	□□□□□ -0.22
LMNA-218	ENST00000502357	ATP2C1	P98194	919 aa	Predicted RBP	13.68	□□□□□ -0.22
LMNA-218	ENST00000502357	CREB5	Q02930	508 aa		13.68	□□□□□ -0.22
LMNA-218	ENST00000502357	ZNF252P-AS1	Q0IIN9	211 aa		13.68	□□□□□ -0.22
LMNA-218	ENST00000502357	USP4	Q13107	963 aa		13.68	□□□□□ -0.22
LMNA-218	ENST00000502357	KYAT1	Q16773	422 aa		13.68	□□□□□ -0.22
LMNA-218	ENST00000502357	EML3	Q32P44	896 aa		13.68	□□□□□ -0.22
LMNA-218	ENST00000502357	SDHAF4	Q5VUM1	108 aa		13.68	□□□□□ -0.22
LMNA-218	ENST00000502357	EFCAB13	Q8IY85	973 aa		13.68	□□□□□ -0.22
LMNA-218	ENST00000502357	OLIG1	Q8TAK6	271 aa		13.68	□□□□□ -0.22
LMNA-218	ENST00000502357	MYRFL	Q96LU7	910 aa		13.68	□□□□□ -0.22
LMNA-218	ENST00000502357	CYP2S1	Q96SQ9	504 aa		13.68	□□□□□ -0.22
LMNA-218	ENST00000502357	PLIN2	Q99541	437 aa		13.68	□□□□□ -0.22
LMNA-218	ENST00000502357	IKZF4	Q9H2S9	585 aa		13.68	□□□□□ -0.22
LMNA-218	ENST00000502357	GCNT4	Q9P109	453 aa		13.68	□□□□□ -0.22
LMNA-218	ENST00000502357	PI4KA	P42356	2102 aa		13.67	□□□□□ -0.22
LMNA-218	ENST00000502357	GON4L	Q3T8J9	2241 aa		13.67	□□□□□ -0.22
LMNA-218	ENST00000502357	PLXND1	Q9Y4D7	1925 aa		13.67	□□□□□ -0.22
LMNA-218	ENST00000502357	CYB561D2	O14569	222 aa		13.67	□□□□□ -0.22
LMNA-218	ENST00000502357	NOL4	O94818	638 aa		13.67	□□□□□ -0.22
LMNA-218	ENST00000502357	RHOBTB1	O94844	696 aa		13.67	□□□□□ -0.22
LMNA-218	ENST00000502357	SEC24B	O95487	1268 aa		13.67	□□□□□ -0.22
LMNA-218	ENST00000502357	APBB3	O95704	486 aa		13.67	□□□□□ -0.22
LMNA-218	ENST00000502357	CEACAM1	P13688	526 aa		13.67	□□□□□ -0.22
LMNA-218	ENST00000502357	TCF3	P15923	654 aa		13.67	□□□□□ -0.22
LMNA-218	ENST00000502357	AVPR1A	P37288	418 aa		13.67	□□□□□ -0.22
LMNA-218	ENST00000502357	OPRD1	P41143	372 aa		13.67	□□□□□ -0.22
LMNA-218	ENST00000502357	IRX4	P78413	519 aa		13.67	□□□□□ -0.22
LMNA-218	ENST00000502357	GTF2B	Q00403	316 aa		13.67	□□□□□ -0.22
LMNA-218	ENST00000502357	FOXC1	Q12948	553 aa		13.67	□□□□□ -0.22
LMNA-218	ENST00000502357	VEPH1	Q14D04	833 aa		13.67	□□□□□ -0.22
LMNA-218	ENST00000502357	PDGFRL	Q15198	375 aa		13.67	□□□□□ -0.22
LMNA-218	ENST00000502357	CCDC142	Q17RM4	750 aa		13.67	□□□□□ -0.22
LMNA-218	ENST00000502357	DTHD1	Q6ZMT9	781 aa		13.67	□□□□□ -0.22
LMNA-218	ENST00000502357	USP33	Q8TEY7	942 aa		13.67	□□□□□ -0.22
LMNA-218	ENST00000502357	OSCP1	Q8WVF1	389 aa		13.67	□□□□□ -0.22
LMNA-218	ENST00000502357	REEP2	Q9BRK0	252 aa		13.67	□□□□□ -0.22
LMNA-218	ENST00000502357	SCNM1	Q9BWG6	230 aa		13.67	□□□□□ -0.22
LMNA-218	ENST00000502357	ADAM33	Q9BZ11	813 aa		13.67	□□□□□ -0.22
LMNA-218	ENST00000502357	RAB34	Q9BZG1	259 aa		13.67	□□□□□ -0.22
LMNA-218	ENST00000502357	LINC00597	Q9H2U6	94 aa		13.67	□□□□□ -0.22
LMNA-218	ENST00000502357	ASB7	Q9H672	318 aa		13.67	□□□□□ -0.22
LMNA-218	ENST00000502357	BLOC1S4	Q9NUP1	217 aa		13.67	□□□□□ -0.22
LMNA-218	ENST00000502357	LARS	Q9P2J5	1176 aa	Known RBP	13.67	□□□□□ -0.22
LMNA-218	ENST00000502357	DSE	Q9UL01	958 aa		13.67	□□□□□ -0.22
LMNA-218	ENST00000502357	NOL7	Q9UMY1	257 aa	Known RBP	13.67	□□□□□ -0.22
LMNA-218	ENST00000502357	LIMCH1	Q9UPQ0	1083 aa		13.67	□□□□□ -0.22
LMNA-218	ENST00000502357	INVS	Q9Y283	1065 aa		13.67	□□□□□ -0.22
LMNA-218	ENST00000502357	C2CD2	Q9Y426	696 aa		13.67	□□□□□ -0.22

Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms