RNA–Protein interactions for RNA: ENST00000502313.1

HMGB1P21-201, Transcript of high mobility group box 1 pseudogene 21, humanhuman

BASIC

Gene HMGB1P21, Length 581 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P21-201ENST00000502313 TP53INP2Q8IXH6 220 aa4.78□□□□□ -1.64
HMGB1P21-201ENST00000502313 ADGRG2Q8IZP9 1017 aa4.78□□□□□ -1.64
HMGB1P21-201ENST00000502313 TEX9Q8N6V9 391 aa4.78□□□□□ -1.64
HMGB1P21-201ENST00000502313 AVL9Q8NBF6 648 aa4.78□□□□□ -1.64
HMGB1P21-201ENST00000502313 AGBL5Q8NDL9 886 aa4.78□□□□□ -1.64
HMGB1P21-201ENST00000502313 CEP70Q8NHQ1 597 aa4.78□□□□□ -1.64
HMGB1P21-201ENST00000502313 MYLIPQ8WY64 445 aa4.78□□□□□ -1.64
HMGB1P21-201ENST00000502313 ATP2A3Q93084 1043 aa4.78□□□□□ -1.64
HMGB1P21-201ENST00000502313 ZNF622Q969S3 477 aaKnown RBP eCLIP4.78□□□□□ -1.64
HMGB1P21-201ENST00000502313 SPATA17Q96L03 361 aa4.78□□□□□ -1.64
HMGB1P21-201ENST00000502313 TUBGCP5Q96RT8 1024 aa4.78□□□□□ -1.64
HMGB1P21-201ENST00000502313 PDCD2LQ9BRP1 358 aa4.78□□□□□ -1.64
HMGB1P21-201ENST00000502313 PDRG1Q9NUG6 133 aa4.78□□□□□ -1.64
HMGB1P21-201ENST00000502313 MTRRQ9UBK8 725 aa4.78□□□□□ -1.64
HMGB1P21-201ENST00000502313 ASH2LQ9UBL3 628 aa4.78□□□□□ -1.64
HMGB1P21-201ENST00000502313 TBK1Q9UHD2 729 aa4.78□□□□□ -1.64
HMGB1P21-201ENST00000502313 ACSL6Q9UKU0 697 aa4.78□□□□□ -1.64
HMGB1P21-201ENST00000502313 PALD1Q9ULE6 856 aa4.78□□□□□ -1.64
HMGB1P21-201ENST00000502313 RABL2BQ9UNT1 228 aa4.78□□□□□ -1.64
HMGB1P21-201ENST00000502313 RRP7AQ9Y3A4 280 aaKnown RBP4.78□□□□□ -1.64
HMGB1P21-201ENST00000502313 TONSLQ96HA7 1378 aa4.78□□□□□ -1.64
HMGB1P21-201ENST00000502313 FMN2Q9NZ56 1722 aa4.77□□□□□ -1.65
HMGB1P21-201ENST00000502313 SHPRHQ149N8 1683 aa4.77□□□□□ -1.65
HMGB1P21-201ENST00000502313 COL22A1Q8NFW1 1626 aaPredicted RBP4.77□□□□□ -1.65
HMGB1P21-201ENST00000502313 F8W031 263 aaPredicted RBP4.77□□□□□ -1.65
HMGB1P21-201ENST00000502313 AP3D1O14617 1153 aa4.77□□□□□ -1.65
HMGB1P21-201ENST00000502313 ZBTB7AO95365 584 aa4.77□□□□□ -1.65
HMGB1P21-201ENST00000502313 SLC4A1P02730 911 aa4.77□□□□□ -1.65
HMGB1P21-201ENST00000502313 CYBBP04839 570 aa4.77□□□□□ -1.65
HMGB1P21-201ENST00000502313 HNRNPA1P09651 372 aaKnown RBP eCLIP4.77□□□□□ -1.65
HMGB1P21-201ENST00000502313 GSPT1P15170 499 aaKnown RBP4.77□□□□□ -1.65
HMGB1P21-201ENST00000502313 ATF7P17544 494 aaPredicted RBP4.77□□□□□ -1.65
HMGB1P21-201ENST00000502313 ABCD1P33897 745 aa4.77□□□□□ -1.65
HMGB1P21-201ENST00000502313 GDNFP39905 211 aa4.77□□□□□ -1.65
HMGB1P21-201ENST00000502313 PAPOLAP51003 745 aaKnown RBP4.77□□□□□ -1.65
HMGB1P21-201ENST00000502313 HK3P52790 923 aa4.77□□□□□ -1.65
HMGB1P21-201ENST00000502313 PPARDQ03181 441 aa4.77□□□□□ -1.65
HMGB1P21-201ENST00000502313 MVKQ03426 396 aa4.77□□□□□ -1.65
HMGB1P21-201ENST00000502313 GRIN1Q05586 938 aa4.77□□□□□ -1.65
HMGB1P21-201ENST00000502313 UBE3CQ15386 1083 aa4.77□□□□□ -1.65
HMGB1P21-201ENST00000502313 SKIDA1Q1XH10 827 aa4.77□□□□□ -1.65
HMGB1P21-201ENST00000502313 PRSS36Q5K4E3 855 aa4.77□□□□□ -1.65
HMGB1P21-201ENST00000502313 NKAPLQ5M9Q1 402 aa4.77□□□□□ -1.65
HMGB1P21-201ENST00000502313 TTC38Q5R3I4 469 aa4.77□□□□□ -1.65
HMGB1P21-201ENST00000502313 PRAMEF9Q5VWM5 478 aa4.77□□□□□ -1.65
HMGB1P21-201ENST00000502313 OLFML2BQ68BL8 750 aa4.77□□□□□ -1.65
HMGB1P21-201ENST00000502313 BORAQ6PGQ7 559 aa4.77□□□□□ -1.65
HMGB1P21-201ENST00000502313 FBXO38Q6PIJ6 1188 aa4.77□□□□□ -1.65
HMGB1P21-201ENST00000502313 ZNF574Q6ZN55 896 aaPredicted RBP4.77□□□□□ -1.65
HMGB1P21-201ENST00000502313 MCM10Q7L590 875 aa4.77□□□□□ -1.65
HMGB1P21-201ENST00000502313 CATSPER4Q7RTX7 472 aa4.77□□□□□ -1.65
HMGB1P21-201ENST00000502313 TMC6Q7Z403 805 aa4.77□□□□□ -1.65
HMGB1P21-201ENST00000502313 R3HCC1LQ7Z5L2 792 aaKnown RBP4.77□□□□□ -1.65
HMGB1P21-201ENST00000502313 EPHX4Q8IUS5 362 aa4.77□□□□□ -1.65
HMGB1P21-201ENST00000502313 CEP97Q8IW35 865 aa4.77□□□□□ -1.65
HMGB1P21-201ENST00000502313 NGEFQ8N5V2 710 aa4.77□□□□□ -1.65
HMGB1P21-201ENST00000502313 OR1N1Q8NGS0 311 aa4.77□□□□□ -1.65
HMGB1P21-201ENST00000502313 OR2I1PQ8NGU4 316 aa4.77□□□□□ -1.65
HMGB1P21-201ENST00000502313 LILRB1Q8NHL6 650 aaPredicted RBP4.77□□□□□ -1.65
HMGB1P21-201ENST00000502313 CALML6Q8TD86 181 aa4.77□□□□□ -1.65
HMGB1P21-201ENST00000502313 CSGALNACT1Q8TDX6 532 aa4.77□□□□□ -1.65
HMGB1P21-201ENST00000502313 CREB3L4Q8TEY5 395 aa4.77□□□□□ -1.65
HMGB1P21-201ENST00000502313 RAB24Q969Q5 203 aa4.77□□□□□ -1.65
HMGB1P21-201ENST00000502313 HDAC10Q969S8 669 aa4.77□□□□□ -1.65
HMGB1P21-201ENST00000502313 MSLNLQ96KJ4 702 aa4.77□□□□□ -1.65
HMGB1P21-201ENST00000502313 CNDP2Q96KP4 475 aaKnown RBP4.77□□□□□ -1.65
HMGB1P21-201ENST00000502313 GBP4Q96PP9 640 aa4.77□□□□□ -1.65
HMGB1P21-201ENST00000502313 GDF15Q99988 308 aa4.77□□□□□ -1.65
HMGB1P21-201ENST00000502313 NCAPGQ9BPX3 1015 aa4.77□□□□□ -1.65
HMGB1P21-201ENST00000502313 ACAD9Q9H845 621 aa4.77□□□□□ -1.65
HMGB1P21-201ENST00000502313 SPON1Q9HCB6 807 aa4.77□□□□□ -1.65
HMGB1P21-201ENST00000502313 CCDC177Q9NQR7 707 aaPredicted RBP4.77□□□□□ -1.65
HMGB1P21-201ENST00000502313 PRDM7Q9NQW5 492 aa4.77□□□□□ -1.65
HMGB1P21-201ENST00000502313 LMBRD1Q9NUN5 540 aa4.77□□□□□ -1.65
HMGB1P21-201ENST00000502313 PCDHA6Q9UN73 950 aa4.77□□□□□ -1.65
HMGB1P21-201ENST00000502313 CFAP20Q9Y6A4 193 aaKnown RBP4.77□□□□□ -1.65
HMGB1P21-201ENST00000502313 PNPLA6Q8IY17 1366 aa4.77□□□□□ -1.65
HMGB1P21-201ENST00000502313 JCADQ9P266 1359 aa4.77□□□□□ -1.65
HMGB1P21-201ENST00000502313 ATP7BP35670 1465 aa4.76□□□□□ -1.65
HMGB1P21-201ENST00000502313 CPLX1O14810 134 aa4.76□□□□□ -1.65
HMGB1P21-201ENST00000502313 PPP1R11O60927 126 aaPredicted RBP4.76□□□□□ -1.65
HMGB1P21-201ENST00000502313 MT-ND3P03897 115 aa4.76□□□□□ -1.65
HMGB1P21-201ENST00000502313 MPOP05164 745 aa4.76□□□□□ -1.65
HMGB1P21-201ENST00000502313 MMEP08473 750 aa4.76□□□□□ -1.65
HMGB1P21-201ENST00000502313 MSL3P1P0C860 447 aa4.76□□□□□ -1.65
HMGB1P21-201ENST00000502313 PNLIPP16233 465 aa4.76□□□□□ -1.65
HMGB1P21-201ENST00000502313 FUT4P22083 530 aa4.76□□□□□ -1.65
HMGB1P21-201ENST00000502313 ADSLP30566 484 aaPredicted RBP4.76□□□□□ -1.65
HMGB1P21-201ENST00000502313 STAT5AP42229 794 aa4.76□□□□□ -1.65
HMGB1P21-201ENST00000502313 WASP42768 502 aa4.76□□□□□ -1.65
HMGB1P21-201ENST00000502313 CCR9P51686 369 aa4.76□□□□□ -1.65
HMGB1P21-201ENST00000502313 AFF3P51826 1226 aaKnown RBP4.76□□□□□ -1.65
HMGB1P21-201ENST00000502313 RNASE9P60153 205 aaKnown RBP4.76□□□□□ -1.65
HMGB1P21-201ENST00000502313 RPS16P62249 146 aaKnown RBP4.76□□□□□ -1.65
HMGB1P21-201ENST00000502313 HERVK_113P62684 666 aa4.76□□□□□ -1.65
HMGB1P21-201ENST00000502313 VAMP2P63027 116 aa4.76□□□□□ -1.65
HMGB1P21-201ENST00000502313 ROM1Q03395 351 aa4.76□□□□□ -1.65
HMGB1P21-201ENST00000502313 CHRNDQ07001 517 aa4.76□□□□□ -1.65
HMGB1P21-201ENST00000502313 MALLQ13021 153 aa4.76□□□□□ -1.65
HMGB1P21-201ENST00000502313 NR1I3Q14994 352 aa4.76□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms