RNA–Protein interactions for RNA: ENST00000498810.1

CDK11A-222, Transcript of cyclin dependent kinase 11A, human

TSL 2

Gene CDK11A, Length 574 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CDK11A-222	ENST00000498810	ADRB2	P07550	413 aa		11.48	□□□□□ -0.57
CDK11A-222	ENST00000498810	OR4Q2	P0C623	313 aa		11.48	□□□□□ -0.57
CDK11A-222	ENST00000498810	DLAT	P10515	647 aa	Known RBP	11.48	□□□□□ -0.57
CDK11A-222	ENST00000498810	PTPN2	P17706	415 aa		11.48	□□□□□ -0.57
CDK11A-222	ENST00000498810	TNNI1	P19237	187 aa		11.48	□□□□□ -0.57
CDK11A-222	ENST00000498810	ALDH1A3	P47895	512 aa		11.48	□□□□□ -0.57
CDK11A-222	ENST00000498810	EPHB3	P54753	998 aa		11.48	□□□□□ -0.57
CDK11A-222	ENST00000498810	TSPY1	Q01534	308 aa		11.48	□□□□□ -0.57
CDK11A-222	ENST00000498810	TWF1	Q12792	350 aa		11.48	□□□□□ -0.57
CDK11A-222	ENST00000498810	MYO1E	Q12965	1108 aa		11.48	□□□□□ -0.57
CDK11A-222	ENST00000498810	CBLB	Q13191	982 aa		11.48	□□□□□ -0.57
CDK11A-222	ENST00000498810	VEPH1	Q14D04	833 aa		11.48	□□□□□ -0.57
CDK11A-222	ENST00000498810	TAF12	Q16514	161 aa		11.48	□□□□□ -0.57
CDK11A-222	ENST00000498810	SNRNP35	Q16560	246 aa	Known RBP	11.48	□□□□□ -0.57
CDK11A-222	ENST00000498810	SLC39A12	Q504Y0	691 aa		11.48	□□□□□ -0.57
CDK11A-222	ENST00000498810	CYP4A22	Q5TCH4	519 aa		11.48	□□□□□ -0.57
CDK11A-222	ENST00000498810	LMBRD2	Q68DH5	695 aa	Predicted RBP	11.48	□□□□□ -0.57
CDK11A-222	ENST00000498810	CRELD2	Q6UXH1	353 aa	Predicted RBP	11.48	□□□□□ -0.57
CDK11A-222	ENST00000498810	MTSS1L	Q765P7	747 aa		11.48	□□□□□ -0.57
CDK11A-222	ENST00000498810	CSGALNACT2	Q8N6G5	542 aa		11.48	□□□□□ -0.57
CDK11A-222	ENST00000498810	GOLGA5	Q8TBA6	731 aa		11.48	□□□□□ -0.57
CDK11A-222	ENST00000498810	PAGE5	Q96GU1	130 aa		11.48	□□□□□ -0.57
CDK11A-222	ENST00000498810	ZNF512	Q96ME7	567 aa	Predicted RBP	11.48	□□□□□ -0.57
CDK11A-222	ENST00000498810	MYADM	Q96S97	322 aa		11.48	□□□□□ -0.57
CDK11A-222	ENST00000498810	SEPT5	Q99719	369 aa	Predicted RBP	11.48	□□□□□ -0.57
CDK11A-222	ENST00000498810	SLITRK6	Q9H5Y7	841 aa		11.48	□□□□□ -0.57
CDK11A-222	ENST00000498810	KCNK12	Q9HB15	430 aa		11.48	□□□□□ -0.57
CDK11A-222	ENST00000498810	PDE11A	Q9HCR9	933 aa		11.48	□□□□□ -0.57
CDK11A-222	ENST00000498810	ASAH2	Q9NR71	780 aa		11.48	□□□□□ -0.57
CDK11A-222	ENST00000498810	AGPAT3	Q9NRZ7	376 aa		11.48	□□□□□ -0.57
CDK11A-222	ENST00000498810	HCFC1R1	Q9NWW0	138 aa		11.48	□□□□□ -0.57
CDK11A-222	ENST00000498810	CDH7	Q9ULB5	785 aa		11.48	□□□□□ -0.57
CDK11A-222	ENST00000498810	ZDHHC9	Q9Y397	364 aa		11.48	□□□□□ -0.57
CDK11A-222	ENST00000498810	YIPF1	Q9Y548	306 aa		11.48	□□□□□ -0.57
CDK11A-222	ENST00000498810	ZFP37	Q9Y6Q3	630 aa	Predicted RBP	11.48	□□□□□ -0.57
CDK11A-222	ENST00000498810	MIA3	Q5JRA6	1907 aa		11.47	□□□□□ -0.57
CDK11A-222	ENST00000498810	ANO9	A1A5B4	782 aa		11.47	□□□□□ -0.57
CDK11A-222	ENST00000498810	PIR	O00625	290 aa		11.47	□□□□□ -0.57
CDK11A-222	ENST00000498810	ZNF197	O14709	1029 aa		11.47	□□□□□ -0.57
CDK11A-222	ENST00000498810	EXOC3	O60645	756 aa		11.47	□□□□□ -0.57
CDK11A-222	ENST00000498810	PHACTR2	O75167	634 aa		11.47	□□□□□ -0.57
CDK11A-222	ENST00000498810	ABLIM3	O94929	683 aa		11.47	□□□□□ -0.57
CDK11A-222	ENST00000498810	RPN1	P04843	607 aa	Known RBP	11.47	□□□□□ -0.57
CDK11A-222	ENST00000498810	RHO	P08100	348 aa		11.47	□□□□□ -0.57
CDK11A-222	ENST00000498810	POU2F2	P09086	479 aa		11.47	□□□□□ -0.57
CDK11A-222	ENST00000498810	MYL4	P12829	197 aa		11.47	□□□□□ -0.57
CDK11A-222	ENST00000498810	AARS	P49588	968 aa	Known RBP eCLIP	11.47	□□□□□ -0.57
CDK11A-222	ENST00000498810	NDUFA8	P51970	172 aa		11.47	□□□□□ -0.57
CDK11A-222	ENST00000498810	RBP5	P82980	135 aa		11.47	□□□□□ -0.57
CDK11A-222	ENST00000498810	MRPL58	Q14197	206 aa	Known RBP	11.47	□□□□□ -0.57
CDK11A-222	ENST00000498810	MYBPC2	Q14324	1141 aa		11.47	□□□□□ -0.57
CDK11A-222	ENST00000498810	KNOP1	Q1ED39	458 aa	Known RBP	11.47	□□□□□ -0.57
CDK11A-222	ENST00000498810	MGAT5B	Q3V5L5	792 aa		11.47	□□□□□ -0.57
CDK11A-222	ENST00000498810	CBWD2	Q8IUF1	395 aa		11.47	□□□□□ -0.57
CDK11A-222	ENST00000498810	TCEAL8	Q8IYN2	117 aa		11.47	□□□□□ -0.57
CDK11A-222	ENST00000498810	FBXL6	Q8N531	539 aa		11.47	□□□□□ -0.57
CDK11A-222	ENST00000498810	XXYLT1	Q8NBI6	393 aa		11.47	□□□□□ -0.57
CDK11A-222	ENST00000498810	ZSWIM2	Q8NEG5	633 aa		11.47	□□□□□ -0.57
CDK11A-222	ENST00000498810	ZNF507	Q8TCN5	953 aa		11.47	□□□□□ -0.57
CDK11A-222	ENST00000498810	CCDC127	Q96BQ5	260 aa		11.47	□□□□□ -0.57
CDK11A-222	ENST00000498810	GCNA	Q96QF7	691 aa		11.47	□□□□□ -0.57
CDK11A-222	ENST00000498810	CGN	Q9P2M7	1197 aa	Known RBP	11.47	□□□□□ -0.57
CDK11A-222	ENST00000498810	EPS15L1	Q9UBC2	864 aa		11.47	□□□□□ -0.57
CDK11A-222	ENST00000498810	MAFF	Q9ULX9	164 aa		11.47	□□□□□ -0.57
CDK11A-222	ENST00000498810	DUSP12	Q9UNI6	340 aa		11.47	□□□□□ -0.57
CDK11A-222	ENST00000498810	MYH10	P35580	1976 aa		11.47	□□□□□ -0.57
CDK11A-222	ENST00000498810		A0A1W2PQ27	194 aa		11.46	□□□□□ -0.57
CDK11A-222	ENST00000498810		A0A1W2PQ64	194 aa		11.46	□□□□□ -0.57
CDK11A-222	ENST00000498810		A0A1W2PQD8	194 aa		11.46	□□□□□ -0.57
CDK11A-222	ENST00000498810	MAN1A2	O60476	641 aa		11.46	□□□□□ -0.57
CDK11A-222	ENST00000498810	N4BP1	O75113	896 aa	Known RBP	11.46	□□□□□ -0.57
CDK11A-222	ENST00000498810	PRPF40A	O75400	957 aa	Known RBP	11.46	□□□□□ -0.57
CDK11A-222	ENST00000498810	OAZ2	O95190	189 aa		11.46	□□□□□ -0.57
CDK11A-222	ENST00000498810	LAMP2	P13473	410 aa		11.46	□□□□□ -0.57
CDK11A-222	ENST00000498810	SNRPF	P62306	86 aa	Known RBP	11.46	□□□□□ -0.57
CDK11A-222	ENST00000498810	MYL7	Q01449	175 aa		11.46	□□□□□ -0.57
CDK11A-222	ENST00000498810	PSMD2	Q13200	908 aa		11.46	□□□□□ -0.57
CDK11A-222	ENST00000498810	TRPC3	Q13507	836 aa		11.46	□□□□□ -0.57
CDK11A-222	ENST00000498810	DUOXA2	Q1HG44	320 aa		11.46	□□□□□ -0.57
CDK11A-222	ENST00000498810	WSCD1	Q658N2	575 aa		11.46	□□□□□ -0.57
CDK11A-222	ENST00000498810	EPM2AIP1	Q7L775	607 aa	Predicted RBP	11.46	□□□□□ -0.57
CDK11A-222	ENST00000498810	WDR49	Q8IV35	697 aa		11.46	□□□□□ -0.57
CDK11A-222	ENST00000498810	DCP1B	Q8IZD4	617 aa	Known RBP	11.46	□□□□□ -0.57
CDK11A-222	ENST00000498810	LRRC52	Q8N7C0	313 aa		11.46	□□□□□ -0.57
CDK11A-222	ENST00000498810	C1orf127	Q8N9H9	656 aa		11.46	□□□□□ -0.57
CDK11A-222	ENST00000498810	LEMD2	Q8NC56	503 aa		11.46	□□□□□ -0.57
CDK11A-222	ENST00000498810	FLCN	Q8NFG4	579 aa		11.46	□□□□□ -0.57
CDK11A-222	ENST00000498810	SCFD1	Q8WVM8	642 aa		11.46	□□□□□ -0.57
CDK11A-222	ENST00000498810	RSAD2	Q8WXG1	361 aa		11.46	□□□□□ -0.57
CDK11A-222	ENST00000498810	FGF13	Q92913	245 aa		11.46	□□□□□ -0.57
CDK11A-222	ENST00000498810	NXPE3	Q969Y0	559 aa		11.46	□□□□□ -0.57
CDK11A-222	ENST00000498810	FAM122A	Q96E09	287 aa		11.46	□□□□□ -0.57
CDK11A-222	ENST00000498810	SMOC2	Q9H3U7	446 aa		11.46	□□□□□ -0.57
CDK11A-222	ENST00000498810	ABI2	Q9NYB9	513 aa	Predicted RBP	11.46	□□□□□ -0.57
CDK11A-222	ENST00000498810	DNMT3B	Q9UBC3	853 aa	Known RBP	11.46	□□□□□ -0.57
CDK11A-222	ENST00000498810	HOOK1	Q9UJC3	728 aa	Known RBP	11.46	□□□□□ -0.57
CDK11A-222	ENST00000498810	SNX9	Q9Y5X1	595 aa		11.46	□□□□□ -0.57
CDK11A-222	ENST00000498810	NUMBL	Q9Y6R0	609 aa		11.46	□□□□□ -0.57
CDK11A-222	ENST00000498810	NOTCH4	Q99466	2003 aa		11.46	□□□□□ -0.57
CDK11A-222	ENST00000498810	NUP210	Q8TEM1	1887 aa	Predicted RBP	11.46	□□□□□ -0.58

Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms