RNA–Protein interactions for RNA: ENST00000498540.2

TRAF4-212, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 748 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-212ENST00000498540 DCLK1O15075 740 aa15.87■□□□□ 0.13
TRAF4-212ENST00000498540 FAM13AO94988 1023 aa15.87■□□□□ 0.13
TRAF4-212ENST00000498540 TAF6P49848 677 aa15.87■□□□□ 0.13
TRAF4-212ENST00000498540 GALK1P51570 392 aa15.87■□□□□ 0.13
TRAF4-212ENST00000498540 ZNF131P52739 623 aa15.87■□□□□ 0.13
TRAF4-212ENST00000498540 DHX8Q14562 1220 aaKnown RBP15.87■□□□□ 0.13
TRAF4-212ENST00000498540 RILPL1Q5EBL4 403 aa15.87■□□□□ 0.13
TRAF4-212ENST00000498540 RNF43Q68DV7 783 aa15.87■□□□□ 0.13
TRAF4-212ENST00000498540 MCTP1Q6DN14 999 aa15.87■□□□□ 0.13
TRAF4-212ENST00000498540 PSAPL1Q6NUJ1 521 aa15.87■□□□□ 0.13
TRAF4-212ENST00000498540 THEM5Q8N1Q8 247 aa15.87■□□□□ 0.13
TRAF4-212ENST00000498540 CAMKK1Q8N5S9 505 aa15.87■□□□□ 0.13
TRAF4-212ENST00000498540 EZH1Q92800 747 aaPredicted RBP15.87■□□□□ 0.13
TRAF4-212ENST00000498540 FIZ1Q96SL8 496 aa15.87■□□□□ 0.13
TRAF4-212ENST00000498540 KIF9Q9HAQ2 790 aa15.87■□□□□ 0.13
TRAF4-212ENST00000498540 PARVGQ9HBI0 331 aa15.87■□□□□ 0.13
TRAF4-212ENST00000498540 VPS45Q9NRW7 570 aa15.87■□□□□ 0.13
TRAF4-212ENST00000498540 DPP3Q9NY33 737 aa15.87■□□□□ 0.13
TRAF4-212ENST00000498540 C2CD2Q9Y426 696 aa15.87■□□□□ 0.13
TRAF4-212ENST00000498540 NUP205Q92621 2012 aa15.87■□□□□ 0.13
TRAF4-212ENST00000498540 TRAK2O60296 914 aa15.86■□□□□ 0.13
TRAF4-212ENST00000498540 TADA3O75528 432 aa15.86■□□□□ 0.13
TRAF4-212ENST00000498540 DDX6P26196 483 aaKnown RBP eCLIP15.86■□□□□ 0.13
TRAF4-212ENST00000498540 GJA4P35212 333 aa15.86■□□□□ 0.13
TRAF4-212ENST00000498540 SMARCB1Q12824 385 aa15.86■□□□□ 0.13
TRAF4-212ENST00000498540 SDHAF4Q5VUM1 108 aa15.86■□□□□ 0.13
TRAF4-212ENST00000498540 CC2D1AQ6P1N0 951 aaPredicted RBP15.86■□□□□ 0.13
TRAF4-212ENST00000498540 EFCAB13Q8IY85 973 aa15.86■□□□□ 0.13
TRAF4-212ENST00000498540 RPLP0P6Q8NHW5 317 aa15.86■□□□□ 0.13
TRAF4-212ENST00000498540 P2RY13Q9BPV8 354 aa15.86■□□□□ 0.13
TRAF4-212ENST00000498540 PI4K2AQ9BTU6 479 aa15.86■□□□□ 0.13
TRAF4-212ENST00000498540 EDEM2Q9BV94 578 aa15.86■□□□□ 0.13
TRAF4-212ENST00000498540 CCSER1Q9C0I3 900 aa15.86■□□□□ 0.13
TRAF4-212ENST00000498540 ASB7Q9H672 318 aa15.86■□□□□ 0.13
TRAF4-212ENST00000498540 BLOC1S4Q9NUP1 217 aa15.86■□□□□ 0.13
TRAF4-212ENST00000498540 MAGED2Q9UNF1 606 aaPredicted RBP15.86■□□□□ 0.13
TRAF4-212ENST00000498540 CACNA1GO43497 2377 aa15.85■□□□□ 0.13
TRAF4-212ENST00000498540 DRD1P21728 446 aa15.85■□□□□ 0.13
TRAF4-212ENST00000498540 SCP2P22307 547 aa15.85■□□□□ 0.13
TRAF4-212ENST00000498540 CREB5Q02930 508 aa15.85■□□□□ 0.13
TRAF4-212ENST00000498540 PDGFRLQ15198 375 aa15.85■□□□□ 0.13
TRAF4-212ENST00000498540 ZC2HC1CQ53FD0 456 aaPredicted RBP15.85■□□□□ 0.13
TRAF4-212ENST00000498540 MON1AQ86VX9 555 aa15.85■□□□□ 0.13
TRAF4-212ENST00000498540 DCP1BQ8IZD4 617 aaKnown RBP15.85■□□□□ 0.13
TRAF4-212ENST00000498540 MRPS31Q92665 395 aaKnown RBP15.85■□□□□ 0.13
TRAF4-212ENST00000498540 KIF2CQ99661 725 aa15.85■□□□□ 0.13
TRAF4-212ENST00000498540 IKZF4Q9H2S9 585 aa15.85■□□□□ 0.13
TRAF4-212ENST00000498540 ZHX3Q9H4I2 956 aa15.85■□□□□ 0.13
TRAF4-212ENST00000498540 PCDHB5Q9Y5E4 795 aa15.85■□□□□ 0.13
TRAF4-212ENST00000498540 HELZP42694 1942 aaKnown RBP15.85■□□□□ 0.13
TRAF4-212ENST00000498540 ANAPC1Q9H1A4 1944 aa15.85■□□□□ 0.13
TRAF4-212ENST00000498540 KPNA7A9QM74 516 aa15.84■□□□□ 0.13
TRAF4-212ENST00000498540 GIPC1O14908 333 aa15.84■□□□□ 0.13
TRAF4-212ENST00000498540 PRPF40AO75400 957 aaKnown RBP15.84■□□□□ 0.13
TRAF4-212ENST00000498540 CSH1P0DML2 217 aa15.84■□□□□ 0.13
TRAF4-212ENST00000498540 CSH2P0DML3 217 aa15.84■□□□□ 0.13
TRAF4-212ENST00000498540 GTF2BQ00403 316 aa15.84■□□□□ 0.13
TRAF4-212ENST00000498540 AMPD2Q01433 879 aa15.84■□□□□ 0.13
TRAF4-212ENST00000498540 DMC1Q14565 340 aa15.84■□□□□ 0.13
TRAF4-212ENST00000498540 MCM6Q14566 821 aa15.84■□□□□ 0.13
TRAF4-212ENST00000498540 ZNF268Q14587 947 aaPredicted RBP15.84■□□□□ 0.13
TRAF4-212ENST00000498540 MTF1Q14872 753 aa15.84■□□□□ 0.13
TRAF4-212ENST00000498540 ELF2Q15723 593 aa15.84■□□□□ 0.13
TRAF4-212ENST00000498540 FBXO43Q4G163 708 aa15.84■□□□□ 0.13
TRAF4-212ENST00000498540 ARL6IP4Q66PJ3 421 aaKnown RBP15.84■□□□□ 0.13
TRAF4-212ENST00000498540 ADALQ6DHV7 355 aa15.84■□□□□ 0.13
TRAF4-212ENST00000498540 SYT13Q7L8C5 426 aa15.84■□□□□ 0.13
TRAF4-212ENST00000498540 TTC16Q8NEE8 873 aa15.84■□□□□ 0.13
TRAF4-212ENST00000498540 SLC22A12Q96S37 553 aa15.84■□□□□ 0.13
TRAF4-212ENST00000498540 ECT2Q9H8V3 914 aa15.84■□□□□ 0.13
TRAF4-212ENST00000498540 AGO2Q9UKV8 859 aaKnown RBP15.84■□□□□ 0.13
TRAF4-212ENST00000498540 ABCA7Q8IZY2 2146 aa15.83■□□□□ 0.13
TRAF4-212ENST00000498540 FAM208BQ5VWN6 2430 aa15.83■□□□□ 0.12
TRAF4-212ENST00000498540 LNP1A1A4G5 178 aa15.83■□□□□ 0.12
TRAF4-212ENST00000498540 BCLAF3A2AJT9 711 aaKnown RBP15.83■□□□□ 0.12
TRAF4-212ENST00000498540 C4orf47A7E2U8 309 aa15.83■□□□□ 0.12
TRAF4-212ENST00000498540 APBB3O95704 486 aa15.83■□□□□ 0.12
TRAF4-212ENST00000498540 CAVIN2O95810 425 aa15.83■□□□□ 0.12
TRAF4-212ENST00000498540 KRT18P05783 430 aaKnown RBP15.83■□□□□ 0.12
TRAF4-212ENST00000498540 PROS1P07225 676 aa15.83■□□□□ 0.12
TRAF4-212ENST00000498540 PLCG1P19174 1290 aa15.83■□□□□ 0.12
TRAF4-212ENST00000498540 NOVA1P51513 510 aaKnown RBP15.83■□□□□ 0.12
TRAF4-212ENST00000498540 WNT7BP56706 349 aa15.83■□□□□ 0.12
TRAF4-212ENST00000498540 USP4Q13107 963 aa15.83■□□□□ 0.12
TRAF4-212ENST00000498540 KARSQ15046 597 aaKnown RBP15.83■□□□□ 0.12
TRAF4-212ENST00000498540 ZNF77Q15935 545 aa15.83■□□□□ 0.12
TRAF4-212ENST00000498540 DDR2Q16832 855 aa15.83■□□□□ 0.12
TRAF4-212ENST00000498540 CCDC142Q17RM4 750 aa15.83■□□□□ 0.12
TRAF4-212ENST00000498540 SV2CQ496J9 727 aa15.83■□□□□ 0.12
TRAF4-212ENST00000498540 CRELD2Q6UXH1 353 aaPredicted RBP15.83■□□□□ 0.12
TRAF4-212ENST00000498540 CPA6Q8N4T0 437 aa15.83■□□□□ 0.12
TRAF4-212ENST00000498540 CD101Q93033 1021 aa15.83■□□□□ 0.12
TRAF4-212ENST00000498540 TRPC7Q9HCX4 862 aa15.83■□□□□ 0.12
TRAF4-212ENST00000498540 DUS2Q9NX74 493 aaKnown RBP15.83■□□□□ 0.12
TRAF4-212ENST00000498540 EBF1Q9UH73 591 aa15.83■□□□□ 0.12
TRAF4-212ENST00000498540 INVSQ9Y283 1065 aa15.83■□□□□ 0.12
TRAF4-212ENST00000498540 WNT6Q9Y6F9 365 aa15.83■□□□□ 0.12
TRAF4-212ENST00000498540 STYXL1Q9Y6J8 313 aa15.83■□□□□ 0.12
TRAF4-212ENST00000498540 THADAQ6YHU6 1953 aa15.83■□□□□ 0.12
TRAF4-212ENST00000498540 SOBPA7XYQ1 873 aa15.82■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 103.5 ms