RNA–Protein interactions for RNA: ENST00000498041.1

RIF1-212, Transcript of replication timing regulatory factor 1, humanhuman

TSL 3

Gene RIF1, Length 776 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-212ENST00000498041 KAT6AQ92794 2004 aa3.59□□□□□ -1.83
RIF1-212ENST00000498041 CFAP69A5D8W1 941 aa3.58□□□□□ -1.84
RIF1-212ENST00000498041 A6NNZ2 444 aa3.58□□□□□ -1.84
RIF1-212ENST00000498041 MYO1CO00159 1063 aa3.58□□□□□ -1.84
RIF1-212ENST00000498041 MPPED1O15442 326 aa3.58□□□□□ -1.84
RIF1-212ENST00000498041 FRS3O43559 492 aa3.58□□□□□ -1.84
RIF1-212ENST00000498041 TBC1D4O60343 1298 aa3.58□□□□□ -1.84
RIF1-212ENST00000498041 ZBED1O96006 694 aa3.58□□□□□ -1.84
RIF1-212ENST00000498041 HRGP04196 525 aa3.58□□□□□ -1.84
RIF1-212ENST00000498041 ATXN1LP0C7T5 689 aaKnown RBP3.58□□□□□ -1.84
RIF1-212ENST00000498041 PPP3CBP16298 524 aa3.58□□□□□ -1.84
RIF1-212ENST00000498041 CD6P30203 668 aa3.58□□□□□ -1.84
RIF1-212ENST00000498041 SLC7A1P30825 629 aa3.58□□□□□ -1.84
RIF1-212ENST00000498041 ADRA1BP35368 520 aa3.58□□□□□ -1.84
RIF1-212ENST00000498041 VIPR2P41587 438 aa3.58□□□□□ -1.84
RIF1-212ENST00000498041 NXPH1P58417 271 aa3.58□□□□□ -1.84
RIF1-212ENST00000498041 MRPS35P82673 323 aaKnown RBP3.58□□□□□ -1.84
RIF1-212ENST00000498041 ITIH3Q06033 890 aa3.58□□□□□ -1.84
RIF1-212ENST00000498041 BOP1Q14137 746 aaKnown RBP3.58□□□□□ -1.84
RIF1-212ENST00000498041 IQCB1Q15051 598 aa3.58□□□□□ -1.84
RIF1-212ENST00000498041 ERCC6LQ2NKX8 1250 aa3.58□□□□□ -1.84
RIF1-212ENST00000498041 LMBRD2Q68DH5 695 aaPredicted RBP3.58□□□□□ -1.84
RIF1-212ENST00000498041 SFRP4Q6FHJ7 346 aaPredicted RBP3.58□□□□□ -1.84
RIF1-212ENST00000498041 PPP4R4Q6NUP7 873 aa3.58□□□□□ -1.84
RIF1-212ENST00000498041 SWSAP1Q6NVH7 229 aa3.58□□□□□ -1.84
RIF1-212ENST00000498041 DPY19L2P1Q6NXN4 242 aa3.58□□□□□ -1.84
RIF1-212ENST00000498041 DARS2Q6PI48 645 aaKnown RBP3.58□□□□□ -1.84
RIF1-212ENST00000498041 LAYNQ6UX15 382 aa3.58□□□□□ -1.84
RIF1-212ENST00000498041 ZNF783Q6ZMS7 281 aa3.58□□□□□ -1.84
RIF1-212ENST00000498041 CCDC149Q6ZUS6 474 aa3.58□□□□□ -1.84
RIF1-212ENST00000498041 COL23A1Q86Y22 540 aaPredicted RBP3.58□□□□□ -1.84
RIF1-212ENST00000498041 TOR1AIP2Q8NFQ8 470 aa3.58□□□□□ -1.84
RIF1-212ENST00000498041 GPR150Q8NGU9 434 aa3.58□□□□□ -1.84
RIF1-212ENST00000498041 ANKS1AQ92625 1134 aa3.58□□□□□ -1.84
RIF1-212ENST00000498041 SUCLG2Q96I99 432 aa3.58□□□□□ -1.84
RIF1-212ENST00000498041 FBXL20Q96IG2 436 aa3.58□□□□□ -1.84
RIF1-212ENST00000498041 PGBD1Q96JS3 809 aa3.58□□□□□ -1.84
RIF1-212ENST00000498041 NELL2Q99435 816 aa3.58□□□□□ -1.84
RIF1-212ENST00000498041 C22orf23Q9BZE7 217 aa3.58□□□□□ -1.84
RIF1-212ENST00000498041 AMBRA1Q9C0C7 1298 aa3.58□□□□□ -1.84
RIF1-212ENST00000498041 TTYH3Q9C0H2 523 aa3.58□□□□□ -1.84
RIF1-212ENST00000498041 LRIT1Q9P2V4 623 aa3.58□□□□□ -1.84
RIF1-212ENST00000498041 XPR1Q9UBH6 696 aa3.58□□□□□ -1.84
RIF1-212ENST00000498041 BTN3A1O00481 513 aa3.57□□□□□ -1.84
RIF1-212ENST00000498041 TPP1O14773 563 aa3.57□□□□□ -1.84
RIF1-212ENST00000498041 DCLK1O15075 740 aa3.57□□□□□ -1.84
RIF1-212ENST00000498041 SOGA1O94964 1423 aa3.57□□□□□ -1.84
RIF1-212ENST00000498041 LMNAP02545 664 aaKnown RBP3.57□□□□□ -1.84
RIF1-212ENST00000498041 TOP2AP11388 1531 aaKnown RBP3.57□□□□□ -1.84
RIF1-212ENST00000498041 CYP2C9P11712 490 aa3.57□□□□□ -1.84
RIF1-212ENST00000498041 XRCC6P12956 609 aaKnown RBP eCLIP3.57□□□□□ -1.84
RIF1-212ENST00000498041 EN2P19622 333 aaPredicted RBP3.57□□□□□ -1.84
RIF1-212ENST00000498041 CXCR5P32302 372 aa3.57□□□□□ -1.84
RIF1-212ENST00000498041 SLC11A2P49281 568 aa3.57□□□□□ -1.84
RIF1-212ENST00000498041 HNRNPMP52272 730 aaKnown RBP eCLIP3.57□□□□□ -1.84
RIF1-212ENST00000498041 UCP3P55916 312 aa3.57□□□□□ -1.84
RIF1-212ENST00000498041 LOXL3P58215 753 aa3.57□□□□□ -1.84
RIF1-212ENST00000498041 FAM193AP78312 1265 aa3.57□□□□□ -1.84
RIF1-212ENST00000498041 SATB1Q01826 763 aa3.57□□□□□ -1.84
RIF1-212ENST00000498041 COL10A1Q03692 680 aa3.57□□□□□ -1.84
RIF1-212ENST00000498041 ZNF169Q14929 603 aaPredicted RBP3.57□□□□□ -1.84
RIF1-212ENST00000498041 PTPRRQ15256 657 aa3.57□□□□□ -1.84
RIF1-212ENST00000498041 KIAA0753Q2KHM9 967 aa3.57□□□□□ -1.84
RIF1-212ENST00000498041 NBPF8Q3BBV2 869 aa3.57□□□□□ -1.84
RIF1-212ENST00000498041 RBM20Q5T481 1227 aaKnown RBP3.57□□□□□ -1.84
RIF1-212ENST00000498041 TTBK1Q5TCY1 1321 aaPredicted RBP3.57□□□□□ -1.84
RIF1-212ENST00000498041 RNF220Q5VTB9 566 aa3.57□□□□□ -1.84
RIF1-212ENST00000498041 KIAA0895LQ68EN5 471 aa3.57□□□□□ -1.84
RIF1-212ENST00000498041 APOA5Q6Q788 366 aa3.57□□□□□ -1.84
RIF1-212ENST00000498041 OLFML1Q6UWY5 402 aa3.57□□□□□ -1.84
RIF1-212ENST00000498041 TMEM108Q6UXF1 575 aa3.57□□□□□ -1.84
RIF1-212ENST00000498041 TSHZ1Q6ZSZ6 1077 aa3.57□□□□□ -1.84
RIF1-212ENST00000498041 DNAJC5GQ8N7S2 189 aa3.57□□□□□ -1.84
RIF1-212ENST00000498041 FAM156AQ8NDB6 213 aa3.57□□□□□ -1.84
RIF1-212ENST00000498041 MYCBPAPQ8TBZ2 947 aa3.57□□□□□ -1.84
RIF1-212ENST00000498041 ACTRT2Q8TDY3 377 aa3.57□□□□□ -1.84
RIF1-212ENST00000498041 LRTOMTQ8WZ04 291 aa3.57□□□□□ -1.84
RIF1-212ENST00000498041 FAM136AQ96C01 138 aa3.57□□□□□ -1.84
RIF1-212ENST00000498041 SALL3Q9BXA9 1300 aa3.57□□□□□ -1.84
RIF1-212ENST00000498041 DPH1Q9BZG8 443 aa3.57□□□□□ -1.84
RIF1-212ENST00000498041 TPSD1Q9BZJ3 242 aa3.57□□□□□ -1.84
RIF1-212ENST00000498041 TPCN1Q9ULQ1 816 aa3.57□□□□□ -1.84
RIF1-212ENST00000498041 PAXBP1Q9Y5B6 917 aa3.57□□□□□ -1.84
RIF1-212ENST00000498041 TNFRSF18Q9Y5U5 241 aa3.57□□□□□ -1.84
RIF1-212ENST00000498041 USP19O94966 1318 aa3.56□□□□□ -1.84
RIF1-212ENST00000498041 A0A087WWL8 130 aa3.56□□□□□ -1.84
RIF1-212ENST00000498041 CCDC151A5D8V7 595 aa3.56□□□□□ -1.84
RIF1-212ENST00000498041 ISM1B1AKI9 464 aa3.56□□□□□ -1.84
RIF1-212ENST00000498041 MYO1FO00160 1098 aa3.56□□□□□ -1.84
RIF1-212ENST00000498041 GOLIM4O00461 696 aa3.56□□□□□ -1.84
RIF1-212ENST00000498041 ORC4O43929 436 aa3.56□□□□□ -1.84
RIF1-212ENST00000498041 TYRP1P17643 537 aa3.56□□□□□ -1.84
RIF1-212ENST00000498041 PLA2G5P39877 138 aa3.56□□□□□ -1.84
RIF1-212ENST00000498041 PXNP49023 591 aaPredicted RBP3.56□□□□□ -1.84
RIF1-212ENST00000498041 ZNF134P52741 427 aa3.56□□□□□ -1.84
RIF1-212ENST00000498041 SUMO3P55854 103 aaPredicted RBP3.56□□□□□ -1.84
RIF1-212ENST00000498041 WNT3P56703 355 aa3.56□□□□□ -1.84
RIF1-212ENST00000498041 LILRA4P59901 499 aa3.56□□□□□ -1.84
RIF1-212ENST00000498041 SLC13A2Q13183 592 aa3.56□□□□□ -1.84
RIF1-212ENST00000498041 CTBP1Q13363 440 aa3.56□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms